RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 A0A1W2PQ64 194 aa9.96□□□□□ -0.81
PCDH9-202ENST00000377865 A0A1W2PQD8 194 aa9.96□□□□□ -0.81
PCDH9-202ENST00000377865 AFMP43652 599 aa9.96□□□□□ -0.81
PCDH9-202ENST00000377865 CCDC178Q5BJE1 867 aa9.96□□□□□ -0.81
PCDH9-202ENST00000377865 KCNH3Q9ULD8 1083 aa9.96□□□□□ -0.81
PCDH9-202ENST00000377865 PSMA7O14818 248 aa9.96□□□□□ -0.81
PCDH9-202ENST00000377865 JAK2O60674 1132 aa9.96□□□□□ -0.81
PCDH9-202ENST00000377865 NBPF7P0C2Y1 421 aaPredicted RBP9.96□□□□□ -0.81
PCDH9-202ENST00000377865 TRIM21P19474 475 aaKnown RBP9.96□□□□□ -0.81
PCDH9-202ENST00000377865 STAT6P42226 847 aa9.96□□□□□ -0.81
PCDH9-202ENST00000377865 ATP2B3Q16720 1220 aa9.96□□□□□ -0.81
PCDH9-202ENST00000377865 GIGYF2Q6Y7W6 1299 aaKnown RBP9.96□□□□□ -0.81
PCDH9-202ENST00000377865 MAP4K1Q92918 833 aa9.96□□□□□ -0.81
PCDH9-202ENST00000377865 CCDC51Q96ER9 411 aa9.96□□□□□ -0.81
PCDH9-202ENST00000377865 CCDC85AQ96PX6 553 aaPredicted RBP9.96□□□□□ -0.81
PCDH9-202ENST00000377865 CFAP65Q6ZU64 1925 aaKnown RBP9.96□□□□□ -0.81
PCDH9-202ENST00000377865 ADCY9O60503 1353 aa9.96□□□□□ -0.82
PCDH9-202ENST00000377865 RANBP6O60518 1105 aaKnown RBP9.96□□□□□ -0.82
PCDH9-202ENST00000377865 PPFIA3O75145 1194 aa9.96□□□□□ -0.82
PCDH9-202ENST00000377865 EIF4A1P60842 406 aaKnown RBP9.96□□□□□ -0.82
PCDH9-202ENST00000377865 ZC3H6P61129 1189 aaKnown RBP9.96□□□□□ -0.82
PCDH9-202ENST00000377865 DHX58Q96C10 678 aa9.96□□□□□ -0.82
PCDH9-202ENST00000377865 SUCLG2Q96I99 432 aa9.96□□□□□ -0.82
PCDH9-202ENST00000377865 NLRP1Q9C000 1473 aa9.96□□□□□ -0.82
PCDH9-202ENST00000377865 BICDL2A1A5D9 508 aa9.96□□□□□ -0.82
PCDH9-202ENST00000377865 IRX3P78415 501 aaPredicted RBP9.96□□□□□ -0.82
PCDH9-202ENST00000377865 IFFO1Q0D2I5 559 aa9.96□□□□□ -0.82
PCDH9-202ENST00000377865 TDRD12Q587J7 1177 aaKnown RBP9.96□□□□□ -0.82
PCDH9-202ENST00000377865 PPP1R12BO60237 982 aaPredicted RBP9.96□□□□□ -0.82
PCDH9-202ENST00000377865 PPP1R2P41236 205 aa9.96□□□□□ -0.82
PCDH9-202ENST00000377865 LDHAL6AQ6ZMR3 332 aa9.96□□□□□ -0.82
PCDH9-202ENST00000377865 ESR2Q92731 530 aa9.96□□□□□ -0.82
PCDH9-202ENST00000377865 MNAT1P51948 309 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 SARM1Q6SZW1 724 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 IGSF22Q8N9C0 903 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 PPP1R13BQ96KQ4 1090 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 CCDC96Q2M329 555 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 MAATS1Q7Z4T9 603 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 C10orf67Q8IYJ2 551 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 PPM1EQ8WY54 764 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 CHAMP1Q96JM3 812 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 INCENPQ9NQS7 918 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 RHOXF2BP0C7M4 288 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 UBA7P41226 1012 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 KIF5AQ12840 1032 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 BEND3Q5T5X7 828 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 CCDC129Q6ZRS4 1044 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 TMTC1Q8IUR5 882 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 MICALL1Q8N3F8 863 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 RHOXF2Q9BQY4 288 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 ZBTB3Q9H5J0 574 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 RBM28Q9NW13 759 aaKnown RBP9.95□□□□□ -0.82
PCDH9-202ENST00000377865 SYNRGQ9UMZ2 1314 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 ETF1P62495 437 aaKnown RBP9.95□□□□□ -0.82
PCDH9-202ENST00000377865 POTEDQ86YR6 584 aa9.95□□□□□ -0.82
PCDH9-202ENST00000377865 VIRMAQ69YN4 1812 aaKnown RBP9.95□□□□□ -0.82
PCDH9-202ENST00000377865 TULP4Q9NRJ4 1543 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 FRMPD1Q5SYB0 1578 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 ZC3H13Q5T200 1668 aaKnown RBP9.94□□□□□ -0.82
PCDH9-202ENST00000377865 SMC1AQ14683 1233 aaKnown RBP9.94□□□□□ -0.82
PCDH9-202ENST00000377865 WHAMMP3Q1A5X7 153 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 SLFNL1Q499Z3 407 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 CCDC82Q8N4S0 544 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 UBXN1Q04323 297 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 TRMT112Q9UI30 125 aaKnown RBP9.94□□□□□ -0.82
PCDH9-202ENST00000377865 SPECC1LQ69YQ0 1117 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 CHST3Q7LGC8 479 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 CCDC91Q7Z6B0 441 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 ZDHHC9Q9Y397 364 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 POLA2Q14181 598 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 HSP90AA4PQ58FG1 418 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 RASEFQ8IZ41 740 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 ABCF2Q9UG63 623 aa9.94□□□□□ -0.82
PCDH9-202ENST00000377865 GIGYF1O75420 1035 aaPredicted RBP9.93□□□□□ -0.82
PCDH9-202ENST00000377865 CMA1P23946 247 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 B4GALNT4Q76KP1 1039 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 GOLGA5Q8TBA6 731 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 RPGRIP1Q96KN7 1286 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 ZHX3Q9H4I2 956 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 PRDM11Q9NQV5 511 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 RTEL1Q9NZ71 1219 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 A0A0D9SFI3 127 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 IKBKBO14920 756 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 WDHD1O75717 1129 aaPredicted RBP9.93□□□□□ -0.82
PCDH9-202ENST00000377865 DEXIO95424 95 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 MAP2K1Q02750 393 aaPredicted RBP9.93□□□□□ -0.82
PCDH9-202ENST00000377865 PDE4BQ07343 736 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 IFIT1BQ5T764 474 aaKnown RBP9.93□□□□□ -0.82
PCDH9-202ENST00000377865 SLC9C2Q5TAH2 1124 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 UNC5CLQ8IV45 518 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 IQUBQ8NA54 791 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 PLBD2Q8NHP8 589 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 GUCA1BQ9UMX6 200 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 ZNF652Q9Y2D9 606 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 LUC7L2Q9Y383 392 aaKnown RBP9.93□□□□□ -0.82
PCDH9-202ENST00000377865 NCKAP5LQ9HCH0 1330 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 E7EWF7 191 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 AKR1B10O60218 316 aa9.93□□□□□ -0.82
PCDH9-202ENST00000377865 HLTFQ14527 1009 aaKnown RBP eCLIP9.93□□□□□ -0.82
PCDH9-202ENST00000377865 POSTNQ15063 836 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms