RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 SEC62Q99442 399 aaKnown RBP15.6■□□□□ 0.09
CBWD3-203ENST00000377344 UBE3CQ15386 1083 aa15.59■□□□□ 0.09
CBWD3-203ENST00000377344 MCMDC2Q4G0Z9 681 aa15.59■□□□□ 0.09
CBWD3-203ENST00000377344 ZMYM1Q5SVZ6 1142 aa15.59■□□□□ 0.09
CBWD3-203ENST00000377344 DACT2Q5SW24 774 aa15.59■□□□□ 0.09
CBWD3-203ENST00000377344 APPBP2Q92624 585 aa15.59■□□□□ 0.09
CBWD3-203ENST00000377344 NSUN4Q96CB9 384 aaKnown RBP15.59■□□□□ 0.09
CBWD3-203ENST00000377344 IL25Q9H293 177 aa15.59■□□□□ 0.09
CBWD3-203ENST00000377344 HELLSQ9NRZ9 838 aa15.59■□□□□ 0.09
CBWD3-203ENST00000377344 CCDC88AQ3V6T2 1871 aa15.59■□□□□ 0.09
CBWD3-203ENST00000377344 PSMD14O00487 310 aa15.59■□□□□ 0.09
CBWD3-203ENST00000377344 SGSM2O43147 1006 aa15.59■□□□□ 0.09
CBWD3-203ENST00000377344 OSBP2Q969R2 916 aa15.59■□□□□ 0.09
CBWD3-203ENST00000377344 TCRBV5S4A2TA0A5A2 114 aa15.58■□□□□ 0.08
CBWD3-203ENST00000377344 GRIN3BO60391 1043 aa15.58■□□□□ 0.08
CBWD3-203ENST00000377344 EIF6P56537 245 aaKnown RBP15.58■□□□□ 0.08
CBWD3-203ENST00000377344 CXCL9Q07325 125 aa15.58■□□□□ 0.08
CBWD3-203ENST00000377344 CCDC129Q6ZRS4 1044 aa15.58■□□□□ 0.08
CBWD3-203ENST00000377344 KIAA0825Q8IV33 1275 aa15.58■□□□□ 0.08
CBWD3-203ENST00000377344 PUS7LQ9H0K6 701 aaKnown RBP15.58■□□□□ 0.08
CBWD3-203ENST00000377344 ANO2Q9NQ90 1003 aa15.58■□□□□ 0.08
CBWD3-203ENST00000377344 TTF2Q9UNY4 1162 aaKnown RBP15.58■□□□□ 0.08
CBWD3-203ENST00000377344 RAD50Q92878 1312 aa15.58■□□□□ 0.08
CBWD3-203ENST00000377344 M0R2C6 588 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 EIF5BO60841 1220 aaKnown RBP15.57■□□□□ 0.08
CBWD3-203ENST00000377344 REC8O95072 547 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 GSTO1P78417 241 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 DIXDC1Q155Q3 683 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 CIAPIN1Q6FI81 312 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 KIAA1211Q6ZU35 1233 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 ZNF589Q86UQ0 364 aaPredicted RBP15.57■□□□□ 0.08
CBWD3-203ENST00000377344 MIGA1Q8NAN2 632 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 ZNF384Q8TF68 577 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 AIDAQ96BJ3 306 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 RNF181Q9P0P0 153 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 SUGT1Q9Y2Z0 365 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 MAST3O60307 1309 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 MAST2Q6P0Q8 1798 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 FKBP1AP62942 108 aaKnown RBP15.57■□□□□ 0.08
CBWD3-203ENST00000377344 TNIP1Q15025 636 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 RSBN1LQ6PCB5 846 aaPredicted RBP15.57■□□□□ 0.08
CBWD3-203ENST00000377344 ADGRA1Q86SQ6 560 aa15.57■□□□□ 0.08
CBWD3-203ENST00000377344 UPF2Q9HAU5 1272 aaKnown RBP15.57■□□□□ 0.08
CBWD3-203ENST00000377344 IGSF3O75054 1194 aa15.56■□□□□ 0.08
CBWD3-203ENST00000377344 LDHCP07864 332 aa15.56■□□□□ 0.08
CBWD3-203ENST00000377344 VIL1P09327 827 aaKnown RBP15.56■□□□□ 0.08
CBWD3-203ENST00000377344 SCNN1DP51172 638 aa15.56■□□□□ 0.08
CBWD3-203ENST00000377344 SLF2Q8IX21 1173 aa15.56■□□□□ 0.08
CBWD3-203ENST00000377344 ZBTB12Q9Y330 459 aaPredicted RBP15.56■□□□□ 0.08
CBWD3-203ENST00000377344 CCDC171Q6TFL3 1326 aa15.56■□□□□ 0.08
CBWD3-203ENST00000377344 MYO3BQ8WXR4 1341 aa15.56■□□□□ 0.08
CBWD3-203ENST00000377344 FZD9O00144 591 aa15.55■□□□□ 0.08
CBWD3-203ENST00000377344 GPAA1O43292 621 aa15.55■□□□□ 0.08
CBWD3-203ENST00000377344 MBD4O95243 580 aa15.55■□□□□ 0.08
CBWD3-203ENST00000377344 C9orf131Q5VYM1 1079 aa15.55■□□□□ 0.08
CBWD3-203ENST00000377344 NOL10Q9BSC4 688 aaKnown RBP15.55■□□□□ 0.08
CBWD3-203ENST00000377344 GJA3Q9Y6H8 435 aa15.55■□□□□ 0.08
CBWD3-203ENST00000377344 PSME4Q14997 1843 aa15.55■□□□□ 0.08
CBWD3-203ENST00000377344 SBF1O95248 1867 aa15.55■□□□□ 0.08
CBWD3-203ENST00000377344 ZNF646O15015 1829 aaPredicted RBP15.55■□□□□ 0.08
CBWD3-203ENST00000377344 MAGEB6P1A0A0J9YX57 407 aa15.54■□□□□ 0.08
CBWD3-203ENST00000377344 TMED8Q6PL24 325 aaPredicted RBP15.54■□□□□ 0.08
CBWD3-203ENST00000377344 ARMT1Q9H993 441 aa15.54■□□□□ 0.08
CBWD3-203ENST00000377344 AATFQ9NY61 560 aaKnown RBP eCLIP15.54■□□□□ 0.08
CBWD3-203ENST00000377344 MROH7-TTC4A0A0A0MT08 1334 aa15.54■□□□□ 0.08
CBWD3-203ENST00000377344 RBM5P52756 815 aaKnown RBP eCLIP15.54■□□□□ 0.08
CBWD3-203ENST00000377344 ZNF541Q9H0D2 1346 aa15.54■□□□□ 0.08
CBWD3-203ENST00000377344 DYNLL1P63167 89 aaKnown RBP15.53■□□□□ 0.08
CBWD3-203ENST00000377344 LCORLQ8N3X6 602 aa15.53■□□□□ 0.08
CBWD3-203ENST00000377344 AGBL3Q8NEM8 1001 aa15.53■□□□□ 0.08
CBWD3-203ENST00000377344 TEKT1Q969V4 418 aa15.53■□□□□ 0.08
CBWD3-203ENST00000377344 DICER1Q9UPY3 1922 aaKnown RBP15.53■□□□□ 0.08
CBWD3-203ENST00000377344 MYH2Q9UKX2 1941 aa15.52■□□□□ 0.08
CBWD3-203ENST00000377344 BAG3O95817 575 aa15.52■□□□□ 0.08
CBWD3-203ENST00000377344 PTH1RQ03431 593 aa15.52■□□□□ 0.08
CBWD3-203ENST00000377344 VPS53Q5VIR6 699 aa15.52■□□□□ 0.08
CBWD3-203ENST00000377344 OGFOD1Q8N543 542 aa15.52■□□□□ 0.08
CBWD3-203ENST00000377344 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.07
CBWD3-203ENST00000377344 APPP05067 770 aa15.52■□□□□ 0.07
CBWD3-203ENST00000377344 BTDP43251 543 aa15.52■□□□□ 0.07
CBWD3-203ENST00000377344 CRKP46108 304 aa15.52■□□□□ 0.07
CBWD3-203ENST00000377344 STRBPQ96SI9 672 aaKnown RBP15.52■□□□□ 0.07
CBWD3-203ENST00000377344 RIOK1Q9BRS2 568 aaKnown RBP15.52■□□□□ 0.07
CBWD3-203ENST00000377344 LSG1Q9H089 658 aaKnown RBP15.52■□□□□ 0.07
CBWD3-203ENST00000377344 HDAC9Q9UKV0 1011 aa15.52■□□□□ 0.07
CBWD3-203ENST00000377344 DAGLAQ9Y4D2 1042 aa15.52■□□□□ 0.07
CBWD3-203ENST00000377344 TIAM2Q8IVF5 1701 aa15.51■□□□□ 0.07
CBWD3-203ENST00000377344 USP17L8P0C7I0 530 aa15.51■□□□□ 0.07
CBWD3-203ENST00000377344 HHIPL2Q6UWX4 724 aa15.51■□□□□ 0.07
CBWD3-203ENST00000377344 GMLQ99445 158 aa15.51■□□□□ 0.07
CBWD3-203ENST00000377344 USP26Q9BXU7 913 aa15.51■□□□□ 0.07
CBWD3-203ENST00000377344 SLC4A4Q9Y6R1 1079 aa15.51■□□□□ 0.07
CBWD3-203ENST00000377344 HSPD1P10809 573 aaKnown RBP15.5■□□□□ 0.07
CBWD3-203ENST00000377344 GMPSP49915 693 aaPredicted RBP15.5■□□□□ 0.07
CBWD3-203ENST00000377344 FAM163AQ96GL9 167 aaPredicted RBP15.5■□□□□ 0.07
CBWD3-203ENST00000377344 SERPINA10Q9UK55 444 aa15.5■□□□□ 0.07
CBWD3-203ENST00000377344 GAKO14976 1311 aa15.5■□□□□ 0.07
CBWD3-203ENST00000377344 ADAMTSL1Q8N6G6 1762 aa15.5■□□□□ 0.07
CBWD3-203ENST00000377344 GPR75-ASB3A0A0A6YYF3 556 aa15.5■□□□□ 0.07
CBWD3-203ENST00000377344 PRKAB2O43741 272 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms