RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.77■■□□□ 1.72
CBWD3-202ENST00000377342 ZC3H4Q9UPT8 1303 aaKnown RBP25.76■■□□□ 1.71
CBWD3-202ENST00000377342 TNIP1Q15025 636 aa25.76■■□□□ 1.71
CBWD3-202ENST00000377342 SLC9C2Q5TAH2 1124 aa25.76■■□□□ 1.71
CBWD3-202ENST00000377342 KIAA0825Q8IV33 1275 aa25.76■■□□□ 1.71
CBWD3-202ENST00000377342 MAGEB6Q8N7X4 407 aa25.76■■□□□ 1.71
CBWD3-202ENST00000377342 F8W031 263 aaPredicted RBP25.75■■□□□ 1.71
CBWD3-202ENST00000377342 CDC45O75419 566 aa25.75■■□□□ 1.71
CBWD3-202ENST00000377342 CHMLP26374 656 aa25.75■■□□□ 1.71
CBWD3-202ENST00000377342 DIXDC1Q155Q3 683 aa25.75■■□□□ 1.71
CBWD3-202ENST00000377342 ADGRA1Q86SQ6 560 aa25.75■■□□□ 1.71
CBWD3-202ENST00000377342 TICAM2Q86XR7 235 aa25.75■■□□□ 1.71
CBWD3-202ENST00000377342 DZIP1Q86YF9 867 aaKnown RBP25.75■■□□□ 1.71
CBWD3-202ENST00000377342 ZNF532Q9HCE3 1301 aa25.75■■□□□ 1.71
CBWD3-202ENST00000377342 RNF113AO15541 343 aaKnown RBP25.74■■□□□ 1.71
CBWD3-202ENST00000377342 TTF2Q9UNY4 1162 aaKnown RBP25.74■■□□□ 1.71
CBWD3-202ENST00000377342 CDK5RAP2Q96SN8 1893 aa25.74■■□□□ 1.71
CBWD3-202ENST00000377342 A0A0D9SFI3 127 aa25.74■■□□□ 1.71
CBWD3-202ENST00000377342 IGSF3O75054 1194 aa25.74■■□□□ 1.71
CBWD3-202ENST00000377342 UBE3CQ15386 1083 aa25.74■■□□□ 1.71
CBWD3-202ENST00000377342 AGBL3Q8NEM8 1001 aa25.74■■□□□ 1.71
CBWD3-202ENST00000377342 FAM227BQ96M60 508 aa25.74■■□□□ 1.71
CBWD3-202ENST00000377342 GJA3Q9Y6H8 435 aa25.74■■□□□ 1.71
CBWD3-202ENST00000377342 ZFYP08048 801 aaPredicted RBP25.73■■□□□ 1.71
CBWD3-202ENST00000377342 NMIQ13287 307 aaPredicted RBP25.73■■□□□ 1.71
CBWD3-202ENST00000377342 GPC2Q8N158 579 aa25.73■■□□□ 1.71
CBWD3-202ENST00000377342 IL25Q9H293 177 aa25.73■■□□□ 1.71
CBWD3-202ENST00000377342 ECM29Q5VYK3 1845 aa25.72■■□□□ 1.71
CBWD3-202ENST00000377342 GMPSP49915 693 aaPredicted RBP25.72■■□□□ 1.71
CBWD3-202ENST00000377342 ZMYM1Q5SVZ6 1142 aa25.72■■□□□ 1.71
CBWD3-202ENST00000377342 NAA16Q6N069 864 aaPredicted RBP25.72■■□□□ 1.71
CBWD3-202ENST00000377342 ZSCAN25Q6NSZ9 544 aa25.72■■□□□ 1.71
CBWD3-202ENST00000377342 MAST3O60307 1309 aa25.72■■□□□ 1.71
CBWD3-202ENST00000377342 RPS12P25398 132 aaKnown RBP25.71■■□□□ 1.71
CBWD3-202ENST00000377342 SCNN1DP51172 638 aa25.71■■□□□ 1.71
CBWD3-202ENST00000377342 SEC62Q99442 399 aaKnown RBP25.71■■□□□ 1.71
CBWD3-202ENST00000377342 DIAPH3Q9NSV4 1193 aa25.71■■□□□ 1.71
CBWD3-202ENST00000377342 GAKO14976 1311 aa25.71■■□□□ 1.71
CBWD3-202ENST00000377342 SHTN1A0MZ66 631 aa25.71■■□□□ 1.71
CBWD3-202ENST00000377342 DCAF8L1A6NGE4 600 aa25.71■■□□□ 1.71
CBWD3-202ENST00000377342 HIP1O00291 1037 aa25.71■■□□□ 1.71
CBWD3-202ENST00000377342 CYP7A1P22680 504 aa25.71■■□□□ 1.71
CBWD3-202ENST00000377342 LRRFIP1Q32MZ4 808 aaKnown RBP25.71■■□□□ 1.71
CBWD3-202ENST00000377342 C8orf34Q49A92 452 aa25.71■■□□□ 1.71
CBWD3-202ENST00000377342 APPBP2Q92624 585 aa25.71■■□□□ 1.71
CBWD3-202ENST00000377342 OSBP2Q969R2 916 aa25.71■■□□□ 1.71
CBWD3-202ENST00000377342 MROH7-TTC4A0A0A0MT08 1334 aa25.7■■□□□ 1.71
CBWD3-202ENST00000377342 FOCADQ5VW36 1801 aa25.7■■□□□ 1.7
CBWD3-202ENST00000377342 M0R2C6 588 aa25.69■■□□□ 1.7
CBWD3-202ENST00000377342 DDNO94850 711 aaPredicted RBP25.69■■□□□ 1.7
CBWD3-202ENST00000377342 TMED8Q6PL24 325 aaPredicted RBP25.69■■□□□ 1.7
CBWD3-202ENST00000377342 CWC27Q6UX04 472 aaKnown RBP25.69■■□□□ 1.7
CBWD3-202ENST00000377342 PUS7LQ9H0K6 701 aaKnown RBP25.69■■□□□ 1.7
CBWD3-202ENST00000377342 WDR90Q96KV7 1748 aa25.68■■□□□ 1.7
CBWD3-202ENST00000377342 DPF2Q92785 391 aa25.68■■□□□ 1.7
CBWD3-202ENST00000377342 DAGLAQ9Y4D2 1042 aa25.68■■□□□ 1.7
CBWD3-202ENST00000377342 PCDHAC2Q9Y5I4 1007 aa25.68■■□□□ 1.7
CBWD3-202ENST00000377342 USP17L8P0C7I0 530 aa25.68■■□□□ 1.7
CBWD3-202ENST00000377342 GSTO1P78417 241 aa25.68■■□□□ 1.7
CBWD3-202ENST00000377342 FAM163AQ96GL9 167 aaPredicted RBP25.68■■□□□ 1.7
CBWD3-202ENST00000377342 CRKP46108 304 aa25.67■■□□□ 1.7
CBWD3-202ENST00000377342 HDLBPQ00341 1268 aaKnown RBP25.67■■□□□ 1.7
CBWD3-202ENST00000377342 ZNF589Q86UQ0 364 aaPredicted RBP25.67■■□□□ 1.7
CBWD3-202ENST00000377342 MIGA1Q8NAN2 632 aa25.67■■□□□ 1.7
CBWD3-202ENST00000377342 TEKT1Q969V4 418 aa25.67■■□□□ 1.7
CBWD3-202ENST00000377342 ZNF280AP59817 542 aaPredicted RBP25.66■■□□□ 1.7
CBWD3-202ENST00000377342 HHIPL2Q6UWX4 724 aa25.66■■□□□ 1.7
CBWD3-202ENST00000377342 CCDC129Q6ZRS4 1044 aa25.66■■□□□ 1.7
CBWD3-202ENST00000377342 RIOK1Q9BRS2 568 aaKnown RBP25.66■■□□□ 1.7
CBWD3-202ENST00000377342 ESYT1Q9BSJ8 1104 aa25.66■■□□□ 1.7
CBWD3-202ENST00000377342 HELLSQ9NRZ9 838 aa25.66■■□□□ 1.7
CBWD3-202ENST00000377342 SERPINA10Q9UK55 444 aa25.66■■□□□ 1.7
CBWD3-202ENST00000377342 SCN4AP35499 1836 aa25.66■■□□□ 1.7
CBWD3-202ENST00000377342 SGSM2O43147 1006 aa25.65■■□□□ 1.7
CBWD3-202ENST00000377342 MICALL2Q8IY33 904 aa25.65■■□□□ 1.7
CBWD3-202ENST00000377342 MRIQ9BWK5 157 aa25.65■■□□□ 1.7
CBWD3-202ENST00000377342 GPRC5DQ9NZD1 345 aa25.65■■□□□ 1.7
CBWD3-202ENST00000377342 RAD50Q92878 1312 aa25.65■■□□□ 1.7
CBWD3-202ENST00000377342 SLF2Q8IX21 1173 aa25.64■■□□□ 1.7
CBWD3-202ENST00000377342 ZDHHC15Q96MV8 337 aa25.64■■□□□ 1.7
CBWD3-202ENST00000377342 DDX60LQ5H9U9 1706 aaKnown RBP25.64■■□□□ 1.7
CBWD3-202ENST00000377342 GPR75-ASB3A0A0A6YYF3 556 aa25.64■■□□□ 1.69
CBWD3-202ENST00000377342 GLTPD2A6NH11 291 aa25.64■■□□□ 1.69
CBWD3-202ENST00000377342 MBD4O95243 580 aa25.64■■□□□ 1.69
CBWD3-202ENST00000377342 LDHCP07864 332 aa25.64■■□□□ 1.69
CBWD3-202ENST00000377342 BTDP43251 543 aa25.64■■□□□ 1.69
CBWD3-202ENST00000377342 DYNLL1P63167 89 aaKnown RBP25.64■■□□□ 1.69
CBWD3-202ENST00000377342 MCMDC2Q4G0Z9 681 aa25.64■■□□□ 1.69
CBWD3-202ENST00000377342 LCORLQ8N3X6 602 aa25.64■■□□□ 1.69
CBWD3-202ENST00000377342 L3MBTL3Q96JM7 780 aaPredicted RBP25.64■■□□□ 1.69
CBWD3-202ENST00000377342 AATFQ9NY61 560 aaKnown RBP eCLIP25.64■■□□□ 1.69
CBWD3-202ENST00000377342 HDAC9Q9UKV0 1011 aa25.64■■□□□ 1.69
CBWD3-202ENST00000377342 NAV1Q8NEY1 1877 aa25.63■■□□□ 1.69
CBWD3-202ENST00000377342 GPAA1O43292 621 aa25.63■■□□□ 1.69
CBWD3-202ENST00000377342 EGFRP00533 1210 aa25.63■■□□□ 1.69
CBWD3-202ENST00000377342 CFAP100Q494V2 611 aa25.63■■□□□ 1.69
CBWD3-202ENST00000377342 APOBEC3HQ6NTF7 200 aaKnown RBP25.63■■□□□ 1.69
CBWD3-202ENST00000377342 CASC1Q6TDU7 716 aa25.63■■□□□ 1.69
CBWD3-202ENST00000377342 OGFOD1Q8N543 542 aa25.63■■□□□ 1.69
CBWD3-202ENST00000377342 CNOT7Q9UIV1 285 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms