RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 AKAP11Q9UKA4 1901 aa13.16□□□□□ -0.3
UBD-203ENST00000377050 NEURL1BA8MQ27 555 aa13.16□□□□□ -0.3
UBD-203ENST00000377050 ATP5JP18859 108 aa13.16□□□□□ -0.3
UBD-203ENST00000377050 IL6STP40189 918 aaPredicted RBP13.16□□□□□ -0.3
UBD-203ENST00000377050 PTH1RQ03431 593 aa13.16□□□□□ -0.3
UBD-203ENST00000377050 RABL6Q3YEC7 729 aaPredicted RBP13.16□□□□□ -0.3
UBD-203ENST00000377050 ZNF790Q6PG37 636 aa13.16□□□□□ -0.3
UBD-203ENST00000377050 JAKMIP1Q96N16 626 aaKnown RBP13.16□□□□□ -0.3
UBD-203ENST00000377050 RBM8AQ9Y5S9 174 aaKnown RBP13.16□□□□□ -0.3
UBD-203ENST00000377050 MAP4K4O95819 1239 aaPredicted RBP13.15□□□□□ -0.3
UBD-203ENST00000377050 IGKV5-2P06315 115 aa13.15□□□□□ -0.3
UBD-203ENST00000377050 TPM3P06753 285 aa13.15□□□□□ -0.3
UBD-203ENST00000377050 MKRN4PQ13434 485 aaPredicted RBP13.15□□□□□ -0.3
UBD-203ENST00000377050 GCKRQ14397 625 aa13.15□□□□□ -0.3
UBD-203ENST00000377050 PROSER3Q2NL68 480 aa13.15□□□□□ -0.3
UBD-203ENST00000377050 CC2D2BQ6DHV5 1058 aa13.15□□□□□ -0.3
UBD-203ENST00000377050 OLFM4Q6UX06 510 aa13.15□□□□□ -0.3
UBD-203ENST00000377050 LARGE2Q8N3Y3 721 aa13.15□□□□□ -0.3
UBD-203ENST00000377050 EAF2Q96CJ1 260 aaPredicted RBP13.15□□□□□ -0.3
UBD-203ENST00000377050 FUCA2Q9BTY2 467 aa13.15□□□□□ -0.3
UBD-203ENST00000377050 TCHHQ07283 1943 aa13.14□□□□□ -0.31
UBD-203ENST00000377050 SLC27A2O14975 620 aa13.14□□□□□ -0.31
UBD-203ENST00000377050 GADD45BO75293 160 aaPredicted RBP13.14□□□□□ -0.31
UBD-203ENST00000377050 GJB2P29033 226 aa13.14□□□□□ -0.31
UBD-203ENST00000377050 HUNKP57058 714 aa13.14□□□□□ -0.31
UBD-203ENST00000377050 PKN2Q16513 984 aaKnown RBP13.14□□□□□ -0.31
UBD-203ENST00000377050 GRIPAP1Q4V328 841 aa13.14□□□□□ -0.31
UBD-203ENST00000377050 LRP10Q7Z4F1 713 aa13.14□□□□□ -0.31
UBD-203ENST00000377050 GLIS2Q9BZE0 524 aaPredicted RBP13.14□□□□□ -0.31
UBD-203ENST00000377050 BICC1Q9H694 974 aaKnown RBP13.14□□□□□ -0.31
UBD-203ENST00000377050 ZNF652Q9Y2D9 606 aa13.14□□□□□ -0.31
UBD-203ENST00000377050 C19orf67A6NJJ6 358 aa13.13□□□□□ -0.31
UBD-203ENST00000377050 CAMTA2O94983 1202 aa13.13□□□□□ -0.31
UBD-203ENST00000377050 ANXA1P04083 346 aa13.13□□□□□ -0.31
UBD-203ENST00000377050 SNRPA1P09661 255 aaKnown RBP13.13□□□□□ -0.31
UBD-203ENST00000377050 RFX5P48382 616 aaPredicted RBP13.13□□□□□ -0.31
UBD-203ENST00000377050 NMIQ13287 307 aaPredicted RBP13.13□□□□□ -0.31
UBD-203ENST00000377050 CWF19L2Q2TBE0 894 aaKnown RBP13.13□□□□□ -0.31
UBD-203ENST00000377050 TPTE2Q6XPS3 522 aa13.13□□□□□ -0.31
UBD-203ENST00000377050 RIC3Q7Z5B4 369 aa13.13□□□□□ -0.31
UBD-203ENST00000377050 CHMP4CQ96CF2 233 aa13.13□□□□□ -0.31
UBD-203ENST00000377050 MAP7D2Q96T17 732 aa13.13□□□□□ -0.31
UBD-203ENST00000377050 GPR108Q9NPR9 543 aa13.13□□□□□ -0.31
UBD-203ENST00000377050 HPS5Q9UPZ3 1129 aa13.13□□□□□ -0.31
UBD-203ENST00000377050 CNPY2Q9Y2B0 182 aa13.13□□□□□ -0.31
UBD-203ENST00000377050 SPEF2Q9C093 1822 aa13.12□□□□□ -0.31
UBD-203ENST00000377050 KLRG2A4D1S0 409 aaPredicted RBP13.12□□□□□ -0.31
UBD-203ENST00000377050 TRPA1O75762 1119 aa13.12□□□□□ -0.31
UBD-203ENST00000377050 RPS6KB1P23443 525 aa13.12□□□□□ -0.31
UBD-203ENST00000377050 ST3GAL1Q11201 340 aa13.12□□□□□ -0.31
UBD-203ENST00000377050 ME3Q16798 604 aa13.12□□□□□ -0.31
UBD-203ENST00000377050 ADCK5Q3MIX3 580 aa13.12□□□□□ -0.31
UBD-203ENST00000377050 FOXD4L5Q5VV16 416 aaPredicted RBP13.12□□□□□ -0.31
UBD-203ENST00000377050 BLOC1S2Q6QNY1 142 aa13.12□□□□□ -0.31
UBD-203ENST00000377050 NOL8Q76FK4 1167 aaKnown RBP13.12□□□□□ -0.31
UBD-203ENST00000377050 CDC37L1Q7L3B6 337 aa13.12□□□□□ -0.31
UBD-203ENST00000377050 DZIP3Q86Y13 1208 aaKnown RBP13.12□□□□□ -0.31
UBD-203ENST00000377050 NIM1KQ8IY84 436 aa13.12□□□□□ -0.31
UBD-203ENST00000377050 ZC3H15Q8WU90 426 aaKnown RBP13.12□□□□□ -0.31
UBD-203ENST00000377050 FOXD4L4Q8WXT5 416 aaPredicted RBP13.12□□□□□ -0.31
UBD-203ENST00000377050 CCDC102AQ96A19 550 aa13.12□□□□□ -0.31
UBD-203ENST00000377050 GPRC5DQ9NZD1 345 aa13.12□□□□□ -0.31
UBD-203ENST00000377050 PA2G4Q9UQ80 394 aaKnown RBP13.12□□□□□ -0.31
UBD-203ENST00000377050 LARGE1O95461 756 aa13.11□□□□□ -0.31
UBD-203ENST00000377050 KRT85P78386 507 aa13.11□□□□□ -0.31
UBD-203ENST00000377050 RGMBQ6NW40 437 aa13.11□□□□□ -0.31
UBD-203ENST00000377050 CLEC4GQ6UXB4 293 aa13.11□□□□□ -0.31
UBD-203ENST00000377050 ANKRD13DQ6ZTN6 518 aa13.11□□□□□ -0.31
UBD-203ENST00000377050 CCDC83Q8IWF9 413 aa13.11□□□□□ -0.31
UBD-203ENST00000377050 UBE2Q2Q8WVN8 375 aa13.11□□□□□ -0.31
UBD-203ENST00000377050 CHAMP1Q96JM3 812 aa13.11□□□□□ -0.31
UBD-203ENST00000377050 ZIC5Q96T25 663 aa13.11□□□□□ -0.31
UBD-203ENST00000377050 SCAND2PQ9GZW5 306 aaPredicted RBP13.11□□□□□ -0.31
UBD-203ENST00000377050 RNF186Q9NXI6 227 aa13.11□□□□□ -0.31
UBD-203ENST00000377050 USP25Q9UHP3 1055 aa13.11□□□□□ -0.31
UBD-203ENST00000377050 TAF5LO75529 589 aa13.1□□□□□ -0.31
UBD-203ENST00000377050 GTF2E1P29083 439 aaPredicted RBP13.1□□□□□ -0.31
UBD-203ENST00000377050 KIF23Q02241 960 aaPredicted RBP13.1□□□□□ -0.31
UBD-203ENST00000377050 MTERF4Q7Z6M4 381 aaKnown RBP13.1□□□□□ -0.31
UBD-203ENST00000377050 FMNL2Q96PY5 1086 aa13.1□□□□□ -0.31
UBD-203ENST00000377050 LLPHQ9BRT6 129 aaKnown RBP13.1□□□□□ -0.31
UBD-203ENST00000377050 FSD1Q9BTV5 496 aa13.1□□□□□ -0.31
UBD-203ENST00000377050 TPCN1Q9ULQ1 816 aa13.1□□□□□ -0.31
UBD-203ENST00000377050 COL4A5P29400 1685 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 KDM4AO75164 1064 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 CAVIN2O95810 425 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 HMGB1P09429 215 aaKnown RBP13.09□□□□□ -0.31
UBD-203ENST00000377050 KCNJ4P48050 445 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 CASP7P55210 303 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 PTPN12Q05209 780 aaKnown RBP13.09□□□□□ -0.31
UBD-203ENST00000377050 KIAA2012Q0VF49 1180 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 TNNI3KQ59H18 835 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 LARP1BQ659C4 914 aaKnown RBP13.09□□□□□ -0.31
UBD-203ENST00000377050 RBM43Q6ZSC3 357 aaKnown RBP13.09□□□□□ -0.31
UBD-203ENST00000377050 RGS22Q8NE09 1264 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 PLBD2Q8NHP8 589 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 XAGE3Q8WTP9 111 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.09□□□□□ -0.31
UBD-203ENST00000377050 HAUS7Q99871 368 aa13.09□□□□□ -0.31
UBD-203ENST00000377050 TMX4Q9H1E5 349 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms