RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CHMP5Q9NZZ3 219 aa15.06■□□□□ 0
VRK3-202ENST00000377011 FBXO3Q9UK99 471 aa15.06■□□□□ 0
VRK3-202ENST00000377011 A0A1B0GUL7 405 aa15.05■□□□□ -0
VRK3-202ENST00000377011 SLC5A1P13866 664 aa15.05■□□□□ -0
VRK3-202ENST00000377011 MFAP1P55081 439 aaKnown RBP15.05■□□□□ -0
VRK3-202ENST00000377011 CDC37L1Q7L3B6 337 aa15.05■□□□□ -0
VRK3-202ENST00000377011 HDAC5Q9UQL6 1122 aa15.05■□□□□ -0
VRK3-202ENST00000377011 MYO3BQ8WXR4 1341 aa15.04■□□□□ -0
VRK3-202ENST00000377011 CELF2O95319 508 aaKnown RBP15.04■□□□□ -0
VRK3-202ENST00000377011 CAVIN4Q5BKX8 364 aa15.04■□□□□ -0
VRK3-202ENST00000377011 PI16Q6UXB8 463 aa15.04■□□□□ -0
VRK3-202ENST00000377011 VPS37DQ86XT2 251 aa15.04■□□□□ -0
VRK3-202ENST00000377011 HSCBQ8IWL3 235 aa15.04■□□□□ -0
VRK3-202ENST00000377011 XAGE2Q96GT9 111 aa15.04■□□□□ -0
VRK3-202ENST00000377011 SLKQ9H2G2 1235 aaPredicted RBP15.04■□□□□ -0
VRK3-202ENST00000377011 SURF6O75683 361 aaKnown RBP15.03■□□□□ -0
VRK3-202ENST00000377011 CFAP100Q494V2 611 aa15.03■□□□□ -0
VRK3-202ENST00000377011 CCDC102BQ68D86 513 aa15.03■□□□□ -0
VRK3-202ENST00000377011 MOB2Q70IA6 237 aa15.03■□□□□ -0
VRK3-202ENST00000377011 TLR7Q9NYK1 1049 aaKnown RBP15.03■□□□□ -0
VRK3-202ENST00000377011 FZD1Q9UP38 647 aa15.03■□□□□ -0
VRK3-202ENST00000377011 EXOC6BQ9Y2D4 811 aa15.03■□□□□ -0
VRK3-202ENST00000377011 CLRN2A0PK11 232 aa15.03■□□□□ -0
VRK3-202ENST00000377011 DCPSQ96C86 337 aaKnown RBP15.03■□□□□ -0
VRK3-202ENST00000377011 TTF2Q9UNY4 1162 aaKnown RBP15.03■□□□□ -0
VRK3-202ENST00000377011 VEGFBP49765 207 aa15.02□□□□□ -0.01
VRK3-202ENST00000377011 FKBP1AP62942 108 aaKnown RBP15.02□□□□□ -0.01
VRK3-202ENST00000377011 RASGRF1Q13972 1273 aa15.02□□□□□ -0.01
VRK3-202ENST00000377011 L1TD1Q5T7N2 865 aaKnown RBP15.02□□□□□ -0.01
VRK3-202ENST00000377011 CDAN1Q8IWY9 1227 aa15.02□□□□□ -0.01
VRK3-202ENST00000377011 OGFOD1Q8N543 542 aa15.02□□□□□ -0.01
VRK3-202ENST00000377011 CDCA5Q96FF9 252 aa15.02□□□□□ -0.01
VRK3-202ENST00000377011 NEUROD6Q96NK8 337 aa15.02□□□□□ -0.01
VRK3-202ENST00000377011 CNTNAP1P78357 1384 aa15.02□□□□□ -0.01
VRK3-202ENST00000377011 PRDX5P30044 214 aa15.01□□□□□ -0.01
VRK3-202ENST00000377011 G3BP1Q13283 466 aaKnown RBP eCLIP15.01□□□□□ -0.01
VRK3-202ENST00000377011 LNPKQ9C0E8 428 aa15.01□□□□□ -0.01
VRK3-202ENST00000377011 CIZ1Q9ULV3 898 aaPredicted RBP15.01□□□□□ -0.01
VRK3-202ENST00000377011 ABT1Q9ULW3 272 aaKnown RBP15.01□□□□□ -0.01
VRK3-202ENST00000377011 ECM29Q5VYK3 1845 aa15.01□□□□□ -0.01
VRK3-202ENST00000377011 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
VRK3-202ENST00000377011 SPDYE6P0CI01 402 aa15□□□□□ -0.01
VRK3-202ENST00000377011 CYP4F22Q6NT55 531 aa15□□□□□ -0.01
VRK3-202ENST00000377011 DBNDD2Q9BQY9 259 aa15□□□□□ -0.01
VRK3-202ENST00000377011 CRKP46108 304 aa15□□□□□ -0.01
VRK3-202ENST00000377011 DLGAP5Q15398 846 aa15□□□□□ -0.01
VRK3-202ENST00000377011 TNNI3KQ59H18 835 aa15□□□□□ -0.01
VRK3-202ENST00000377011 SAPCD2Q86UD0 394 aa15□□□□□ -0.01
VRK3-202ENST00000377011 EAF2Q96CJ1 260 aaPredicted RBP15□□□□□ -0.01
VRK3-202ENST00000377011 ZIC5Q96T25 663 aa15□□□□□ -0.01
VRK3-202ENST00000377011 TDRD3Q9H7E2 651 aaKnown RBP15□□□□□ -0.01
VRK3-202ENST00000377011 BRPF3Q9ULD4 1205 aa15□□□□□ -0.01
VRK3-202ENST00000377011 TLL2Q9Y6L7 1015 aa15□□□□□ -0.01
VRK3-202ENST00000377011 FPGT-TNNI3KV9GXZ4 949 aa15□□□□□ -0.01
VRK3-202ENST00000377011 MYO5AQ9Y4I1 1855 aaKnown RBP14.99□□□□□ -0.01
VRK3-202ENST00000377011 AKAP11Q9UKA4 1901 aa14.99□□□□□ -0.01
VRK3-202ENST00000377011 RASSF10A6NK89 507 aa14.99□□□□□ -0.01
VRK3-202ENST00000377011 APBB1O00213 710 aa14.99□□□□□ -0.01
VRK3-202ENST00000377011 RBM5P52756 815 aaKnown RBP eCLIP14.99□□□□□ -0.01
VRK3-202ENST00000377011 CACNB3P54284 484 aa14.99□□□□□ -0.01
VRK3-202ENST00000377011 DIXDC1Q155Q3 683 aa14.99□□□□□ -0.01
VRK3-202ENST00000377011 SULF1Q8IWU6 871 aa14.99□□□□□ -0.01
VRK3-202ENST00000377011 JMYQ8N9B5 988 aa14.99□□□□□ -0.01
VRK3-202ENST00000377011 MTMR14Q8NCE2 650 aa14.99□□□□□ -0.01
VRK3-202ENST00000377011 ZNF384Q8TF68 577 aa14.99□□□□□ -0.01
VRK3-202ENST00000377011 CCDC8Q9H0W5 538 aaPredicted RBP14.99□□□□□ -0.01
VRK3-202ENST00000377011 HDAC9Q9UKV0 1011 aa14.99□□□□□ -0.01
VRK3-202ENST00000377011 SSC5DA1L4H1 1573 aa14.99□□□□□ -0.01
VRK3-202ENST00000377011 MCM4P33991 863 aa14.98□□□□□ -0.01
VRK3-202ENST00000377011 DDIT3P35638 169 aa14.98□□□□□ -0.01
VRK3-202ENST00000377011 GRM1Q13255 1194 aa14.98□□□□□ -0.01
VRK3-202ENST00000377011 ANKRD45Q5TZF3 282 aa14.98□□□□□ -0.01
VRK3-202ENST00000377011 TBC1D9Q6ZT07 1266 aa14.98□□□□□ -0.01
VRK3-202ENST00000377011 IL1RAPL2Q9NP60 686 aa14.98□□□□□ -0.01
VRK3-202ENST00000377011 HMG20BQ9P0W2 317 aa14.98□□□□□ -0.01
VRK3-202ENST00000377011 DBNLQ9UJU6 430 aaKnown RBP14.98□□□□□ -0.01
VRK3-202ENST00000377011 DDX11L8A8MPP1 907 aa14.97□□□□□ -0.01
VRK3-202ENST00000377011 AOC2O75106 756 aa14.97□□□□□ -0.01
VRK3-202ENST00000377011 MCAMP43121 646 aa14.97□□□□□ -0.01
VRK3-202ENST00000377011 OS9Q13438 667 aaPredicted RBP14.97□□□□□ -0.01
VRK3-202ENST00000377011 DEFB115Q30KQ5 88 aa14.97□□□□□ -0.01
VRK3-202ENST00000377011 FAM43AQ8N2R8 423 aa14.97□□□□□ -0.01
VRK3-202ENST00000377011 NDUFB9Q9Y6M9 179 aa14.97□□□□□ -0.01
VRK3-202ENST00000377011 PITPNM2Q9BZ72 1349 aa14.97□□□□□ -0.01
VRK3-202ENST00000377011 PTMSP20962 102 aa14.97□□□□□ -0.01
VRK3-202ENST00000377011 PRKG1Q13976 671 aa14.97□□□□□ -0.01
VRK3-202ENST00000377011 APOBEC3HQ6NTF7 200 aaKnown RBP14.97□□□□□ -0.01
VRK3-202ENST00000377011 RPAP2Q8IXW5 612 aaPredicted RBP14.97□□□□□ -0.01
VRK3-202ENST00000377011 VEZTQ9HBM0 779 aa14.97□□□□□ -0.01
VRK3-202ENST00000377011 SNRKQ9NRH2 765 aa14.97□□□□□ -0.01
VRK3-202ENST00000377011 ZNF70Q9UC06 446 aaPredicted RBP14.97□□□□□ -0.01
VRK3-202ENST00000377011 SERPINA10Q9UK55 444 aa14.97□□□□□ -0.01
VRK3-202ENST00000377011 CDC45O75419 566 aa14.96□□□□□ -0.01
VRK3-202ENST00000377011 DEFB129Q9H1M3 183 aa14.96□□□□□ -0.01
VRK3-202ENST00000377011 DCTPP1Q9H773 170 aa14.96□□□□□ -0.01
VRK3-202ENST00000377011 GBA2Q9HCG7 927 aaPredicted RBP14.96□□□□□ -0.01
VRK3-202ENST00000377011 AKAP2Q9Y2D5 859 aa14.96□□□□□ -0.01
VRK3-202ENST00000377011 SPDYE2Q495Y8 402 aa14.95□□□□□ -0.02
VRK3-202ENST00000377011 TBC1D22AQ8WUA7 517 aa14.95□□□□□ -0.02
VRK3-202ENST00000377011 ISY1Q9ULR0 285 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms