RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 KIF16BQ96L93 1317 aa26.3■■□□□ 1.8
VSX1-201ENST00000376707 ARAP2Q8WZ64 1704 aa26.3■■□□□ 1.8
VSX1-201ENST00000376707 FGFR2P21802 821 aa26.29■■□□□ 1.8
VSX1-201ENST00000376707 MANSC4A6NHS7 340 aaPredicted RBP26.28■■□□□ 1.8
VSX1-201ENST00000376707 ZBTB48P10074 688 aaPredicted RBP26.28■■□□□ 1.8
VSX1-201ENST00000376707 SLC5A1P13866 664 aa26.28■■□□□ 1.8
VSX1-201ENST00000376707 HDLBPQ00341 1268 aaKnown RBP26.28■■□□□ 1.8
VSX1-201ENST00000376707 ZNF296Q8WUU4 475 aaPredicted RBP26.28■■□□□ 1.8
VSX1-201ENST00000376707 HDAC5Q9UQL6 1122 aa26.28■■□□□ 1.8
VSX1-201ENST00000376707 TCP10L2B9ZVM9 353 aa26.27■■□□□ 1.8
VSX1-201ENST00000376707 USP2O75604 605 aaPredicted RBP26.27■■□□□ 1.8
VSX1-201ENST00000376707 TNNI2P48788 182 aa26.27■■□□□ 1.8
VSX1-201ENST00000376707 INHBEP58166 350 aa26.27■■□□□ 1.8
VSX1-201ENST00000376707 LPIN2Q92539 896 aa26.27■■□□□ 1.8
VSX1-201ENST00000376707 TEKT1Q969V4 418 aa26.27■■□□□ 1.8
VSX1-201ENST00000376707 WNK4Q96J92 1243 aa26.27■■□□□ 1.8
VSX1-201ENST00000376707 GPR25O00155 361 aa26.26■■□□□ 1.79
VSX1-201ENST00000376707 ALDH1A1P00352 501 aa26.26■■□□□ 1.79
VSX1-201ENST00000376707 RGS19P49795 217 aa26.26■■□□□ 1.79
VSX1-201ENST00000376707 MLLT1Q03111 559 aaPredicted RBP26.26■■□□□ 1.79
VSX1-201ENST00000376707 ANKRD13AQ8IZ07 590 aa26.26■■□□□ 1.79
VSX1-201ENST00000376707 SIL1Q9H173 461 aa26.26■■□□□ 1.79
VSX1-201ENST00000376707 MAST3O60307 1309 aa26.25■■□□□ 1.79
VSX1-201ENST00000376707 RARSP54136 660 aaKnown RBP26.25■■□□□ 1.79
VSX1-201ENST00000376707 NOM1Q5C9Z4 860 aaKnown RBP26.25■■□□□ 1.79
VSX1-201ENST00000376707 ATG9AQ7Z3C6 839 aa26.25■■□□□ 1.79
VSX1-201ENST00000376707 CFHR5Q9BXR6 569 aa26.25■■□□□ 1.79
VSX1-201ENST00000376707 FBXO3Q9UK99 471 aa26.25■■□□□ 1.79
VSX1-201ENST00000376707 TMEM39BQ9GZU3 492 aa26.24■■□□□ 1.79
VSX1-201ENST00000376707 SUGT1Q9Y2Z0 365 aa26.24■■□□□ 1.79
VSX1-201ENST00000376707 LRRFIP2Q9Y608 721 aaKnown RBP26.24■■□□□ 1.79
VSX1-201ENST00000376707 CIAO1O76071 339 aa26.23■■□□□ 1.79
VSX1-201ENST00000376707 TEPSINQ96N21 525 aa26.23■■□□□ 1.79
VSX1-201ENST00000376707 MRIQ9BWK5 157 aa26.23■■□□□ 1.79
VSX1-201ENST00000376707 TMOD2Q9NZR1 351 aa26.23■■□□□ 1.79
VSX1-201ENST00000376707 CEP126Q9P2H0 1117 aa26.23■■□□□ 1.79
VSX1-201ENST00000376707 PKN2Q16513 984 aaKnown RBP26.22■■□□□ 1.79
VSX1-201ENST00000376707 IFNL1Q8IU54 200 aa26.22■■□□□ 1.79
VSX1-201ENST00000376707 CDAN1Q8IWY9 1227 aa26.22■■□□□ 1.79
VSX1-201ENST00000376707 WDR66Q8TBY9 1149 aa26.22■■□□□ 1.79
VSX1-201ENST00000376707 ZDHHC15Q96MV8 337 aa26.22■■□□□ 1.79
VSX1-201ENST00000376707 FKTNO75072 461 aa26.21■■□□□ 1.79
VSX1-201ENST00000376707 CACNB3P54284 484 aa26.21■■□□□ 1.79
VSX1-201ENST00000376707 ATP2B3Q16720 1220 aa26.21■■□□□ 1.79
VSX1-201ENST00000376707 DIEXFQ68CQ4 756 aaKnown RBP26.21■■□□□ 1.79
VSX1-201ENST00000376707 MIER1Q8N108 512 aa26.21■■□□□ 1.79
VSX1-201ENST00000376707 MEIS3Q99687 375 aa26.21■■□□□ 1.79
VSX1-201ENST00000376707 R3HDMLQ9H3Y0 253 aa26.21■■□□□ 1.79
VSX1-201ENST00000376707 ARHGAP45Q92619 1136 aa26.2■■□□□ 1.78
VSX1-201ENST00000376707 ELP3Q9H9T3 547 aa26.2■■□□□ 1.78
VSX1-201ENST00000376707 IGF2BP3O00425 579 aaKnown RBP eCLIP26.19■■□□□ 1.78
VSX1-201ENST00000376707 GJA5P36382 358 aa26.19■■□□□ 1.78
VSX1-201ENST00000376707 IL15P40933 162 aaPredicted RBP26.19■■□□□ 1.78
VSX1-201ENST00000376707 HHIPL2Q6UWX4 724 aa26.19■■□□□ 1.78
VSX1-201ENST00000376707 GNL3LQ9NVN8 582 aaKnown RBP26.19■■□□□ 1.78
VSX1-201ENST00000376707 OTUD7BQ6GQQ9 843 aa26.18■■□□□ 1.78
VSX1-201ENST00000376707 APOBEC3HQ6NTF7 200 aaKnown RBP26.18■■□□□ 1.78
VSX1-201ENST00000376707 OPTNQ96CV9 577 aa26.18■■□□□ 1.78
VSX1-201ENST00000376707 HPS5Q9UPZ3 1129 aa26.18■■□□□ 1.78
VSX1-201ENST00000376707 PA2G4Q9UQ80 394 aaKnown RBP26.18■■□□□ 1.78
VSX1-201ENST00000376707 GNAI3P08754 354 aa26.17■■□□□ 1.78
VSX1-201ENST00000376707 MAP3K9P80192 1104 aa26.17■■□□□ 1.78
VSX1-201ENST00000376707 INTS3Q68E01 1043 aaKnown RBP26.17■■□□□ 1.78
VSX1-201ENST00000376707 CSADQ9Y600 493 aa26.17■■□□□ 1.78
VSX1-201ENST00000376707 SOX10P56693 466 aa26.16■■□□□ 1.78
VSX1-201ENST00000376707 FKBP1CQ5VVH2 108 aa26.16■■□□□ 1.78
VSX1-201ENST00000376707 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.16■■□□□ 1.78
VSX1-201ENST00000376707 FAM83AQ86UY5 434 aa26.16■■□□□ 1.78
VSX1-201ENST00000376707 COPRSQ9NQ92 184 aa26.16■■□□□ 1.78
VSX1-201ENST00000376707 IPO8O15397 1037 aaKnown RBP26.15■■□□□ 1.78
VSX1-201ENST00000376707 VGLL4Q14135 290 aa26.15■■□□□ 1.78
VSX1-201ENST00000376707 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.15■■□□□ 1.78
VSX1-201ENST00000376707 HOOK2Q96ED9 719 aa26.15■■□□□ 1.78
VSX1-201ENST00000376707 OTOFQ9HC10 1997 aa26.13■■□□□ 1.77
VSX1-201ENST00000376707 FBXO46Q6PJ61 603 aaPredicted RBP26.13■■□□□ 1.77
VSX1-201ENST00000376707 DENND2AQ9ULE3 1009 aa26.13■■□□□ 1.77
VSX1-201ENST00000376707 TESPA1A2RU30 521 aaPredicted RBP26.12■■□□□ 1.77
VSX1-201ENST00000376707 SEMA3EO15041 775 aa26.12■■□□□ 1.77
VSX1-201ENST00000376707 SRGAP3O43295 1099 aa26.12■■□□□ 1.77
VSX1-201ENST00000376707 LDHBP07195 334 aaKnown RBP26.12■■□□□ 1.77
VSX1-201ENST00000376707 PRDX5P30044 214 aa26.12■■□□□ 1.77
VSX1-201ENST00000376707 PHKA1P46020 1223 aa26.12■■□□□ 1.77
VSX1-201ENST00000376707 CNKSR2Q8WXI2 1034 aa26.12■■□□□ 1.77
VSX1-201ENST00000376707 FRAT1Q92837 279 aaPredicted RBP26.12■■□□□ 1.77
VSX1-201ENST00000376707 CRHR2Q13324 411 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 DIXDC1Q155Q3 683 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 DCAF15Q66K64 600 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 OTUD5Q96G74 571 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 WRNIP1Q96S55 665 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 PTPN18Q99952 460 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 DAGLAQ9Y4D2 1042 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 LAMB1P07942 1786 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 MYH13Q9UKX3 1938 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 TRIM27P14373 513 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 ADORA1P30542 326 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 GTF2A2P52657 109 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 ATF7IPQ6VMQ6 1270 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 MS4A4AQ96JQ5 239 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 SALL1Q9NSC2 1324 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 RPAP1Q9BWH6 1393 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms