RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 KIF16BQ96L93 1317 aa26.3■■□□□ 1.8
VSX1-201ENST00000376707 ARAP2Q8WZ64 1704 aa26.3■■□□□ 1.8
VSX1-201ENST00000376707 FGFR2P21802 821 aa26.29■■□□□ 1.8
VSX1-201ENST00000376707 MANSC4A6NHS7 340 aaPredicted RBP26.28■■□□□ 1.8
VSX1-201ENST00000376707 ZBTB48P10074 688 aaPredicted RBP26.28■■□□□ 1.8
VSX1-201ENST00000376707 SLC5A1P13866 664 aa26.28■■□□□ 1.8
VSX1-201ENST00000376707 HDLBPQ00341 1268 aaKnown RBP26.28■■□□□ 1.8
VSX1-201ENST00000376707 ZNF296Q8WUU4 475 aaPredicted RBP26.28■■□□□ 1.8
VSX1-201ENST00000376707 HDAC5Q9UQL6 1122 aa26.28■■□□□ 1.8
VSX1-201ENST00000376707 TCP10L2B9ZVM9 353 aa26.27■■□□□ 1.8
VSX1-201ENST00000376707 USP2O75604 605 aaPredicted RBP26.27■■□□□ 1.8
VSX1-201ENST00000376707 TNNI2P48788 182 aa26.27■■□□□ 1.8
VSX1-201ENST00000376707 INHBEP58166 350 aa26.27■■□□□ 1.8
VSX1-201ENST00000376707 LPIN2Q92539 896 aa26.27■■□□□ 1.8
VSX1-201ENST00000376707 TEKT1Q969V4 418 aa26.27■■□□□ 1.8
VSX1-201ENST00000376707 WNK4Q96J92 1243 aa26.27■■□□□ 1.8
VSX1-201ENST00000376707 GPR25O00155 361 aa26.26■■□□□ 1.79
VSX1-201ENST00000376707 ALDH1A1P00352 501 aa26.26■■□□□ 1.79
VSX1-201ENST00000376707 RGS19P49795 217 aa26.26■■□□□ 1.79
VSX1-201ENST00000376707 MLLT1Q03111 559 aaPredicted RBP26.26■■□□□ 1.79
VSX1-201ENST00000376707 ANKRD13AQ8IZ07 590 aa26.26■■□□□ 1.79
VSX1-201ENST00000376707 SIL1Q9H173 461 aa26.26■■□□□ 1.79
VSX1-201ENST00000376707 MAST3O60307 1309 aa26.25■■□□□ 1.79
VSX1-201ENST00000376707 RARSP54136 660 aaKnown RBP26.25■■□□□ 1.79
VSX1-201ENST00000376707 NOM1Q5C9Z4 860 aaKnown RBP26.25■■□□□ 1.79
VSX1-201ENST00000376707 ATG9AQ7Z3C6 839 aa26.25■■□□□ 1.79
VSX1-201ENST00000376707 CFHR5Q9BXR6 569 aa26.25■■□□□ 1.79
VSX1-201ENST00000376707 FBXO3Q9UK99 471 aa26.25■■□□□ 1.79
VSX1-201ENST00000376707 TMEM39BQ9GZU3 492 aa26.24■■□□□ 1.79
VSX1-201ENST00000376707 SUGT1Q9Y2Z0 365 aa26.24■■□□□ 1.79
VSX1-201ENST00000376707 LRRFIP2Q9Y608 721 aaKnown RBP26.24■■□□□ 1.79
VSX1-201ENST00000376707 CIAO1O76071 339 aa26.23■■□□□ 1.79
VSX1-201ENST00000376707 TEPSINQ96N21 525 aa26.23■■□□□ 1.79
VSX1-201ENST00000376707 MRIQ9BWK5 157 aa26.23■■□□□ 1.79
VSX1-201ENST00000376707 TMOD2Q9NZR1 351 aa26.23■■□□□ 1.79
VSX1-201ENST00000376707 CEP126Q9P2H0 1117 aa26.23■■□□□ 1.79
VSX1-201ENST00000376707 PKN2Q16513 984 aaKnown RBP26.22■■□□□ 1.79
VSX1-201ENST00000376707 IFNL1Q8IU54 200 aa26.22■■□□□ 1.79
VSX1-201ENST00000376707 CDAN1Q8IWY9 1227 aa26.22■■□□□ 1.79
VSX1-201ENST00000376707 WDR66Q8TBY9 1149 aa26.22■■□□□ 1.79
VSX1-201ENST00000376707 ZDHHC15Q96MV8 337 aa26.22■■□□□ 1.79
VSX1-201ENST00000376707 FKTNO75072 461 aa26.21■■□□□ 1.79
VSX1-201ENST00000376707 CACNB3P54284 484 aa26.21■■□□□ 1.79
VSX1-201ENST00000376707 ATP2B3Q16720 1220 aa26.21■■□□□ 1.79
VSX1-201ENST00000376707 DIEXFQ68CQ4 756 aaKnown RBP26.21■■□□□ 1.79
VSX1-201ENST00000376707 MIER1Q8N108 512 aa26.21■■□□□ 1.79
VSX1-201ENST00000376707 MEIS3Q99687 375 aa26.21■■□□□ 1.79
VSX1-201ENST00000376707 R3HDMLQ9H3Y0 253 aa26.21■■□□□ 1.79
VSX1-201ENST00000376707 ARHGAP45Q92619 1136 aa26.2■■□□□ 1.78
VSX1-201ENST00000376707 ELP3Q9H9T3 547 aa26.2■■□□□ 1.78
VSX1-201ENST00000376707 IGF2BP3O00425 579 aaKnown RBP eCLIP26.19■■□□□ 1.78
VSX1-201ENST00000376707 GJA5P36382 358 aa26.19■■□□□ 1.78
VSX1-201ENST00000376707 IL15P40933 162 aaPredicted RBP26.19■■□□□ 1.78
VSX1-201ENST00000376707 HHIPL2Q6UWX4 724 aa26.19■■□□□ 1.78
VSX1-201ENST00000376707 GNL3LQ9NVN8 582 aaKnown RBP26.19■■□□□ 1.78
VSX1-201ENST00000376707 OTUD7BQ6GQQ9 843 aa26.18■■□□□ 1.78
VSX1-201ENST00000376707 APOBEC3HQ6NTF7 200 aaKnown RBP26.18■■□□□ 1.78
VSX1-201ENST00000376707 OPTNQ96CV9 577 aa26.18■■□□□ 1.78
VSX1-201ENST00000376707 HPS5Q9UPZ3 1129 aa26.18■■□□□ 1.78
VSX1-201ENST00000376707 PA2G4Q9UQ80 394 aaKnown RBP26.18■■□□□ 1.78
VSX1-201ENST00000376707 GNAI3P08754 354 aa26.17■■□□□ 1.78
VSX1-201ENST00000376707 MAP3K9P80192 1104 aa26.17■■□□□ 1.78
VSX1-201ENST00000376707 INTS3Q68E01 1043 aaKnown RBP26.17■■□□□ 1.78
VSX1-201ENST00000376707 CSADQ9Y600 493 aa26.17■■□□□ 1.78
VSX1-201ENST00000376707 SOX10P56693 466 aa26.16■■□□□ 1.78
VSX1-201ENST00000376707 FKBP1CQ5VVH2 108 aa26.16■■□□□ 1.78
VSX1-201ENST00000376707 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.16■■□□□ 1.78
VSX1-201ENST00000376707 FAM83AQ86UY5 434 aa26.16■■□□□ 1.78
VSX1-201ENST00000376707 COPRSQ9NQ92 184 aa26.16■■□□□ 1.78
VSX1-201ENST00000376707 IPO8O15397 1037 aaKnown RBP26.15■■□□□ 1.78
VSX1-201ENST00000376707 VGLL4Q14135 290 aa26.15■■□□□ 1.78
VSX1-201ENST00000376707 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.15■■□□□ 1.78
VSX1-201ENST00000376707 HOOK2Q96ED9 719 aa26.15■■□□□ 1.78
VSX1-201ENST00000376707 OTOFQ9HC10 1997 aa26.13■■□□□ 1.77
VSX1-201ENST00000376707 FBXO46Q6PJ61 603 aaPredicted RBP26.13■■□□□ 1.77
VSX1-201ENST00000376707 DENND2AQ9ULE3 1009 aa26.13■■□□□ 1.77
VSX1-201ENST00000376707 TESPA1A2RU30 521 aaPredicted RBP26.12■■□□□ 1.77
VSX1-201ENST00000376707 SEMA3EO15041 775 aa26.12■■□□□ 1.77
VSX1-201ENST00000376707 SRGAP3O43295 1099 aa26.12■■□□□ 1.77
VSX1-201ENST00000376707 LDHBP07195 334 aaKnown RBP26.12■■□□□ 1.77
VSX1-201ENST00000376707 PRDX5P30044 214 aa26.12■■□□□ 1.77
VSX1-201ENST00000376707 PHKA1P46020 1223 aa26.12■■□□□ 1.77
VSX1-201ENST00000376707 CNKSR2Q8WXI2 1034 aa26.12■■□□□ 1.77
VSX1-201ENST00000376707 FRAT1Q92837 279 aaPredicted RBP26.12■■□□□ 1.77
VSX1-201ENST00000376707 CRHR2Q13324 411 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 DIXDC1Q155Q3 683 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 DCAF15Q66K64 600 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 OTUD5Q96G74 571 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 WRNIP1Q96S55 665 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 PTPN18Q99952 460 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 DAGLAQ9Y4D2 1042 aa26.11■■□□□ 1.77
VSX1-201ENST00000376707 LAMB1P07942 1786 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 MYH13Q9UKX3 1938 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 TRIM27P14373 513 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 ADORA1P30542 326 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 GTF2A2P52657 109 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 ATF7IPQ6VMQ6 1270 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 MS4A4AQ96JQ5 239 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 SALL1Q9NSC2 1324 aa26.1■■□□□ 1.77
VSX1-201ENST00000376707 RPAP1Q9BWH6 1393 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms