RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 DDX11Q96FC9 970 aa15.03■□□□□ -0
MSH5-204ENST00000375755 TOB2Q14106 344 aaPredicted RBP15.02■□□□□ -0
MSH5-204ENST00000375755 CCDC129Q6ZRS4 1044 aa15.02■□□□□ -0
MSH5-204ENST00000375755 ZBTB38Q8NAP3 1195 aaPredicted RBP15.02■□□□□ -0
MSH5-204ENST00000375755 NEK11Q8NG66 645 aa15.02■□□□□ -0
MSH5-204ENST00000375755 PPP1R13BQ96KQ4 1090 aa15.02■□□□□ -0
MSH5-204ENST00000375755 GREM2Q9H772 168 aa15.02■□□□□ -0
MSH5-204ENST00000375755 SPATA31A6Q5VVP1 1343 aa15.02■□□□□ -0
MSH5-204ENST00000375755 EYA2O00167 538 aa15.02□□□□□ -0.01
MSH5-204ENST00000375755 JAK2O60674 1132 aa15.02□□□□□ -0.01
MSH5-204ENST00000375755 NBPF11Q86T75 865 aa15.02□□□□□ -0.01
MSH5-204ENST00000375755 ZRANB2O95218 330 aaKnown RBP eCLIP15.01□□□□□ -0.01
MSH5-204ENST00000375755 PCCAP05165 728 aaPredicted RBP15.01□□□□□ -0.01
MSH5-204ENST00000375755 ADORA1P30542 326 aa15.01□□□□□ -0.01
MSH5-204ENST00000375755 CEBPZQ03701 1054 aaKnown RBP15.01□□□□□ -0.01
MSH5-204ENST00000375755 MAP4K1Q92918 833 aa15.01□□□□□ -0.01
MSH5-204ENST00000375755 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.01□□□□□ -0.015e-8■■□□□ 12.7
MSH5-204ENST00000375755 POLR3GO15318 223 aaPredicted RBP15.01□□□□□ -0.01
MSH5-204ENST00000375755 ATP5JP18859 108 aa15.01□□□□□ -0.01
MSH5-204ENST00000375755 CCDC57Q2TAC2 916 aa15.01□□□□□ -0.01
MSH5-204ENST00000375755 BLOC1S2Q6QNY1 142 aa15.01□□□□□ -0.01
MSH5-204ENST00000375755 TRMT112Q9UI30 125 aaKnown RBP15.01□□□□□ -0.01
MSH5-204ENST00000375755 PSMA5P28066 241 aa15.01□□□□□ -0.01
MSH5-204ENST00000375755 CDCA7Q9BWT1 371 aaPredicted RBP15.01□□□□□ -0.01
MSH5-204ENST00000375755 GOLPH3LQ9H4A5 285 aa15.01□□□□□ -0.01
MSH5-204ENST00000375755 A0A1B0GUL7 405 aa15□□□□□ -0.01
MSH5-204ENST00000375755 RPS6KB1P23443 525 aa15□□□□□ -0.01
MSH5-204ENST00000375755 TRIM28Q13263 835 aaKnown RBP15□□□□□ -0.01
MSH5-204ENST00000375755 BARGINQ6ZT62 677 aa15□□□□□ -0.01
MSH5-204ENST00000375755 AOPEPQ8N6M6 819 aa15□□□□□ -0.01
MSH5-204ENST00000375755 BRF1Q92994 677 aa15□□□□□ -0.01
MSH5-204ENST00000375755 TSPYL1Q9H0U9 437 aa15□□□□□ -0.01
MSH5-204ENST00000375755 EIF5P55010 431 aaKnown RBP15□□□□□ -0.01
MSH5-204ENST00000375755 GSDMDP57764 484 aa15□□□□□ -0.01
MSH5-204ENST00000375755 OSBPL5Q9H0X9 879 aaPredicted RBP15□□□□□ -0.01
MSH5-204ENST00000375755 PALLDQ8WX93 1383 aa14.99□□□□□ -0.01
MSH5-204ENST00000375755 IL6STP40189 918 aaPredicted RBP14.99□□□□□ -0.01
MSH5-204ENST00000375755 CCAR1Q8IX12 1150 aaKnown RBP14.99□□□□□ -0.01
MSH5-204ENST00000375755 TTLL11Q8NHH1 800 aa14.99□□□□□ -0.01
MSH5-204ENST00000375755 ERCC4Q92889 916 aaPredicted RBP14.99□□□□□ -0.01
MSH5-204ENST00000375755 FBXW7Q969H0 707 aa14.99□□□□□ -0.01
MSH5-204ENST00000375755 ANKRD36CQ5JPF3 1778 aa14.99□□□□□ -0.01
MSH5-204ENST00000375755 GOLIM4O00461 696 aa14.99□□□□□ -0.01
MSH5-204ENST00000375755 IRS4O14654 1257 aaPredicted RBP14.99□□□□□ -0.01
MSH5-204ENST00000375755 IL15P40933 162 aaPredicted RBP14.99□□□□□ -0.01
MSH5-204ENST00000375755 ANKRD1Q15327 319 aa14.99□□□□□ -0.01
MSH5-204ENST00000375755 GORABQ5T7V8 394 aa14.99□□□□□ -0.01
MSH5-204ENST00000375755 FTOQ9C0B1 505 aaKnown RBP eCLIP14.99□□□□□ -0.01
MSH5-204ENST00000375755 SNRKQ9NRH2 765 aa14.99□□□□□ -0.01
MSH5-204ENST00000375755 CCDC87Q9NVE4 849 aa14.99□□□□□ -0.01
MSH5-204ENST00000375755 CTAGE5O15320 804 aa14.98□□□□□ -0.01
MSH5-204ENST00000375755 CSF1RP07333 972 aa14.98□□□□□ -0.01
MSH5-204ENST00000375755 ITGA6P23229 1130 aa14.98□□□□□ -0.01
MSH5-204ENST00000375755 SUSD4Q5VX71 490 aa14.98□□□□□ -0.01
MSH5-204ENST00000375755 ARMCX5Q6P1M9 558 aa14.98□□□□□ -0.01
MSH5-204ENST00000375755 ORC3Q9UBD5 711 aaPredicted RBP14.98□□□□□ -0.01
MSH5-204ENST00000375755 ST5P78524 1137 aa14.98□□□□□ -0.01
MSH5-204ENST00000375755 PI16Q6UXB8 463 aa14.98□□□□□ -0.01
MSH5-204ENST00000375755 SNAP23O00161 211 aa14.98□□□□□ -0.01
MSH5-204ENST00000375755 SEC31AO94979 1220 aaKnown RBP14.98□□□□□ -0.01
MSH5-204ENST00000375755 TMCO3Q6UWJ1 677 aa14.98□□□□□ -0.01
MSH5-204ENST00000375755 FNBP4Q8N3X1 1017 aaPredicted RBP14.98□□□□□ -0.01
MSH5-204ENST00000375755 HAUS7Q99871 368 aa14.98□□□□□ -0.01
MSH5-204ENST00000375755 ANO10Q9NW15 660 aa14.98□□□□□ -0.01
MSH5-204ENST00000375755 ZNF609O15014 1411 aa14.97□□□□□ -0.01
MSH5-204ENST00000375755 ADD1P35611 737 aaKnown RBP14.97□□□□□ -0.01
MSH5-204ENST00000375755 IFIT5Q13325 482 aaKnown RBP14.97□□□□□ -0.01
MSH5-204ENST00000375755 SCARF1Q14162 830 aa14.97□□□□□ -0.01
MSH5-204ENST00000375755 TEX35Q5T0J7 233 aa14.97□□□□□ -0.01
MSH5-204ENST00000375755 ZNF34Q8IZ26 560 aa14.97□□□□□ -0.01
MSH5-204ENST00000375755 LINC00116Q8NCU8 138 aa14.97□□□□□ -0.01
MSH5-204ENST00000375755 SMARCE1Q969G3 411 aa14.97□□□□□ -0.01
MSH5-204ENST00000375755 ALDH8A1Q9H2A2 487 aaPredicted RBP14.97□□□□□ -0.01
MSH5-204ENST00000375755 CFAP45Q9UL16 551 aa14.97□□□□□ -0.01
MSH5-204ENST00000375755 PSDA5PKW4 1024 aaPredicted RBP14.96□□□□□ -0.01
MSH5-204ENST00000375755 H3BQV1 296 aa14.96□□□□□ -0.01
MSH5-204ENST00000375755 CTSWP56202 376 aa14.96□□□□□ -0.01
MSH5-204ENST00000375755 IFFO2Q5TF58 517 aa14.96□□□□□ -0.01
MSH5-204ENST00000375755 CEP57L1Q8IYX8 460 aa14.96□□□□□ -0.01
MSH5-204ENST00000375755 HELBQ8NG08 1087 aaPredicted RBP14.96□□□□□ -0.01
MSH5-204ENST00000375755 CHMP4CQ96CF2 233 aa14.96□□□□□ -0.01
MSH5-204ENST00000375755 ZCCHC17Q9NP64 241 aaKnown RBP14.96□□□□□ -0.01
MSH5-204ENST00000375755 USP21Q9UK80 565 aa14.96□□□□□ -0.01
MSH5-204ENST00000375755 TPM4P67936 248 aa14.96□□□□□ -0.01
MSH5-204ENST00000375755 TMC6Q7Z403 805 aa14.96□□□□□ -0.01
MSH5-204ENST00000375755 UBXN4Q92575 508 aa14.96□□□□□ -0.01
MSH5-204ENST00000375755 IMPACTQ9P2X3 320 aa14.96□□□□□ -0.01
MSH5-204ENST00000375755 MYH3P11055 1940 aa14.96□□□□□ -0.02
MSH5-204ENST00000375755 A0A0G2JLW4 131 aa14.96□□□□□ -0.02
MSH5-204ENST00000375755 VPS72Q15906 364 aa14.96□□□□□ -0.02
MSH5-204ENST00000375755 MUM1L1Q5H9M0 696 aa14.96□□□□□ -0.02
MSH5-204ENST00000375755 KRBA2Q6ZNG9 492 aa14.96□□□□□ -0.02
MSH5-204ENST00000375755 TXLNBQ8N3L3 684 aa14.96□□□□□ -0.02
MSH5-204ENST00000375755 XAGE2Q96GT9 111 aa14.96□□□□□ -0.02
MSH5-204ENST00000375755 PLA2G12BQ9BX93 195 aa14.96□□□□□ -0.02
MSH5-204ENST00000375755 UBXN6Q9BZV1 441 aa14.96□□□□□ -0.02
MSH5-204ENST00000375755 CEP126Q9P2H0 1117 aa14.96□□□□□ -0.02
MSH5-204ENST00000375755 MED23Q9ULK4 1368 aa14.95□□□□□ -0.02
MSH5-204ENST00000375755 CAMTA2O94983 1202 aa14.95□□□□□ -0.02
MSH5-204ENST00000375755 ENGASEQ8NFI3 743 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms