RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 DZIP1LQ8IYY4 767 aaKnown RBP19.41■□□□□ 0.7
SDHB-201ENST00000375499 PRMT6Q96LA8 375 aaPredicted RBP19.41■□□□□ 0.7
SDHB-201ENST00000375499 C1orf115Q9H7X2 142 aa19.41■□□□□ 0.7
SDHB-201ENST00000375499 HDAC5Q9UQL6 1122 aa19.41■□□□□ 0.7
SDHB-201ENST00000375499 CLRN2A0PK11 232 aa19.4■□□□□ 0.7
SDHB-201ENST00000375499 ADORA1P30542 326 aa19.4■□□□□ 0.7
SDHB-201ENST00000375499 IL15P40933 162 aaPredicted RBP19.4■□□□□ 0.7
SDHB-201ENST00000375499 ATP2B3Q16720 1220 aa19.4■□□□□ 0.7
SDHB-201ENST00000375499 PRPF38BQ5VTL8 546 aaKnown RBP19.4■□□□□ 0.7
SDHB-201ENST00000375499 FTSJ3Q8IY81 847 aaKnown RBP19.4■□□□□ 0.7
SDHB-201ENST00000375499 CEP126Q9P2H0 1117 aa19.4■□□□□ 0.7
SDHB-201ENST00000375499 TTF2Q9UNY4 1162 aaKnown RBP19.4■□□□□ 0.7
SDHB-201ENST00000375499 SSC5DA1L4H1 1573 aa19.4■□□□□ 0.7
SDHB-201ENST00000375499 ITPRIPQ8IWB1 547 aa19.39■□□□□ 0.69
SDHB-201ENST00000375499 PANK1Q8TE04 598 aa19.39■□□□□ 0.69
SDHB-201ENST00000375499 PHKA1P46020 1223 aa19.38■□□□□ 0.69
SDHB-201ENST00000375499 APOBEC3FQ8IUX4 373 aaKnown RBP19.38■□□□□ 0.69
SDHB-201ENST00000375499 TNRC18O15417 2968 aaPredicted RBP19.37■□□□□ 0.69
SDHB-201ENST00000375499 FRAT2O75474 233 aaPredicted RBP19.37■□□□□ 0.69
SDHB-201ENST00000375499 RBM5P52756 815 aaKnown RBP eCLIP19.37■□□□□ 0.69
SDHB-201ENST00000375499 TFCP2Q12800 502 aa19.37■□□□□ 0.69
SDHB-201ENST00000375499 NOM1Q5C9Z4 860 aaKnown RBP19.37■□□□□ 0.69
SDHB-201ENST00000375499 FZD1Q9UP38 647 aa19.37■□□□□ 0.69
SDHB-201ENST00000375499 ZBTB7BO15156 539 aaPredicted RBP19.36■□□□□ 0.69
SDHB-201ENST00000375499 CRKP46108 304 aa19.36■□□□□ 0.69
SDHB-201ENST00000375499 SOX10P56693 466 aa19.36■□□□□ 0.69
SDHB-201ENST00000375499 POLA2Q14181 598 aa19.36■□□□□ 0.69
SDHB-201ENST00000375499 SERPINA10Q9UK55 444 aa19.36■□□□□ 0.69
SDHB-201ENST00000375499 TIMM10P62072 90 aa19.35■□□□□ 0.69
SDHB-201ENST00000375499 TBC1D22AQ8WUA7 517 aa19.35■□□□□ 0.69
SDHB-201ENST00000375499 DEFB129Q9H1M3 183 aa19.35■□□□□ 0.69
SDHB-201ENST00000375499 VEZTQ9HBM0 779 aa19.35■□□□□ 0.69
SDHB-201ENST00000375499 A0A1B0GUL7 405 aa19.34■□□□□ 0.69
SDHB-201ENST00000375499 UBE2Q2LH0YL09 131 aa19.34■□□□□ 0.69
SDHB-201ENST00000375499 SPDYE2Q495Y8 402 aa19.34■□□□□ 0.69
SDHB-201ENST00000375499 RASAL3Q86YV0 1011 aa19.34■□□□□ 0.69
SDHB-201ENST00000375499 CDAN1Q8IWY9 1227 aa19.34■□□□□ 0.69
SDHB-201ENST00000375499 TDRD3Q9H7E2 651 aaKnown RBP19.34■□□□□ 0.69
SDHB-201ENST00000375499 ZNF70Q9UC06 446 aaPredicted RBP19.34■□□□□ 0.69
SDHB-201ENST00000375499 PRKG1Q13976 671 aa19.33■□□□□ 0.68
SDHB-201ENST00000375499 CCDC102BQ68D86 513 aa19.33■□□□□ 0.68
SDHB-201ENST00000375499 HPS5Q9UPZ3 1129 aa19.33■□□□□ 0.68
SDHB-201ENST00000375499 OTOFQ9HC10 1997 aa19.33■□□□□ 0.68
SDHB-201ENST00000375499 MYO1BO43795 1136 aa19.32■□□□□ 0.68
SDHB-201ENST00000375499 PRDX5P30044 214 aa19.32■□□□□ 0.68
SDHB-201ENST00000375499 TM4SF4P48230 202 aa19.32■□□□□ 0.68
SDHB-201ENST00000375499 ATP8B2P98198 1209 aa19.32■□□□□ 0.68
SDHB-201ENST00000375499 SSH3Q8TE77 659 aa19.32■□□□□ 0.68
SDHB-201ENST00000375499 XAGE2Q96GT9 111 aa19.32■□□□□ 0.68
SDHB-201ENST00000375499 RCAN3Q9UKA8 241 aa19.32■□□□□ 0.68
SDHB-201ENST00000375499 RASGRF1Q13972 1273 aa19.31■□□□□ 0.68
SDHB-201ENST00000375499 TTLL12Q14166 644 aaPredicted RBP19.31■□□□□ 0.68
SDHB-201ENST00000375499 GCC1Q96CN9 775 aa19.31■□□□□ 0.68
SDHB-201ENST00000375499 CACNB3P54284 484 aa19.3■□□□□ 0.68
SDHB-201ENST00000375499 HDLBPQ00341 1268 aaKnown RBP19.3■□□□□ 0.68
SDHB-201ENST00000375499 RASA3Q14644 834 aa19.3■□□□□ 0.68
SDHB-201ENST00000375499 DIXDC1Q155Q3 683 aa19.3■□□□□ 0.68
SDHB-201ENST00000375499 NBPF12Q5TAG4 269 aaPredicted RBP19.3■□□□□ 0.68
SDHB-201ENST00000375499 APOBEC3HQ6NTF7 200 aaKnown RBP19.3■□□□□ 0.68
SDHB-201ENST00000375499 CEP85Q6P2H3 762 aa19.3■□□□□ 0.68
SDHB-201ENST00000375499 WDR66Q8TBY9 1149 aa19.3■□□□□ 0.68
SDHB-201ENST00000375499 TEKT1Q969V4 418 aa19.3■□□□□ 0.68
SDHB-201ENST00000375499 SUGT1Q9Y2Z0 365 aa19.3■□□□□ 0.68
SDHB-201ENST00000375499 TCP10L2B9ZVM9 353 aa19.29■□□□□ 0.68
SDHB-201ENST00000375499 NF2P35240 595 aa19.29■□□□□ 0.68
SDHB-201ENST00000375499 G3BP1Q13283 466 aaKnown RBP eCLIP19.29■□□□□ 0.68
SDHB-201ENST00000375499 ZDHHC15Q96MV8 337 aa19.29■□□□□ 0.68
SDHB-201ENST00000375499 TEPSINQ96N21 525 aa19.29■□□□□ 0.68
SDHB-201ENST00000375499 CFHR5Q9BXR6 569 aa19.29■□□□□ 0.68
SDHB-201ENST00000375499 PPP2R3BQ9Y5P8 575 aa19.29■□□□□ 0.68
SDHB-201ENST00000375499 MYH2Q9UKX2 1941 aa19.29■□□□□ 0.68
SDHB-201ENST00000375499 C20orf194Q5TEA3 1177 aa19.28■□□□□ 0.68
SDHB-201ENST00000375499 FBXO46Q6PJ61 603 aaPredicted RBP19.28■□□□□ 0.68
SDHB-201ENST00000375499 PI16Q6UXB8 463 aa19.28■□□□□ 0.68
SDHB-201ENST00000375499 ZNF296Q8WUU4 475 aaPredicted RBP19.28■□□□□ 0.68
SDHB-201ENST00000375499 TMEM39BQ9GZU3 492 aa19.28■□□□□ 0.68
SDHB-201ENST00000375499 GNL3LQ9NVN8 582 aaKnown RBP19.28■□□□□ 0.68
SDHB-201ENST00000375499 DENND2AQ9ULE3 1009 aa19.28■□□□□ 0.68
SDHB-201ENST00000375499 ANGEL1Q9UNK9 670 aaKnown RBP19.28■□□□□ 0.68
SDHB-201ENST00000375499 AKAP2Q9Y2D5 859 aa19.28■□□□□ 0.68
SDHB-201ENST00000375499 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
SDHB-201ENST00000375499 DAGLAQ9Y4D2 1042 aa19.28■□□□□ 0.68
SDHB-201ENST00000375499 SALL1Q9NSC2 1324 aa19.27■□□□□ 0.68
SDHB-201ENST00000375499 ZBTB22O15209 634 aa19.27■□□□□ 0.68
SDHB-201ENST00000375499 SREBF2Q12772 1141 aa19.27■□□□□ 0.68
SDHB-201ENST00000375499 MVPQ14764 893 aaKnown RBP19.27■□□□□ 0.68
SDHB-201ENST00000375499 LDLRAD1Q5T700 205 aa19.27■□□□□ 0.68
SDHB-201ENST00000375499 NEUROD6Q96NK8 337 aa19.27■□□□□ 0.68
SDHB-201ENST00000375499 MAST3O60307 1309 aa19.26■□□□□ 0.67
SDHB-201ENST00000375499 GPR25O00155 361 aa19.26■□□□□ 0.67
SDHB-201ENST00000375499 SEMA3EO15041 775 aa19.26■□□□□ 0.67
SDHB-201ENST00000375499 SURF6O75683 361 aaKnown RBP19.26■□□□□ 0.67
SDHB-201ENST00000375499 MKRN3Q13064 507 aaKnown RBP19.26■□□□□ 0.67
SDHB-201ENST00000375499 MAP3K11Q16584 847 aa19.26■□□□□ 0.67
SDHB-201ENST00000375499 HHIPL2Q6UWX4 724 aa19.26■□□□□ 0.67
SDHB-201ENST00000375499 MRIQ9BWK5 157 aa19.26■□□□□ 0.67
SDHB-201ENST00000375499 NOP58Q9Y2X3 529 aaKnown RBP19.26■□□□□ 0.67
SDHB-201ENST00000375499 TBC1D8O95759 1140 aa19.25■□□□□ 0.67
SDHB-201ENST00000375499 ALDH1A1P00352 501 aa19.25■□□□□ 0.67
SDHB-201ENST00000375499 LDHBP07195 334 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms