RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 CLRN2A0PK11 232 aa13.52□□□□□ -0.25
HLA-DQA1-202ENST00000374949 F8W031 263 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQA1-202ENST00000374949 GRM8O00222 908 aa13.52□□□□□ -0.25
HLA-DQA1-202ENST00000374949 HMMRO75330 724 aa13.52□□□□□ -0.25
HLA-DQA1-202ENST00000374949 TAF5LO75529 589 aa13.52□□□□□ -0.25
HLA-DQA1-202ENST00000374949 NBPF7P0C2Y1 421 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQA1-202ENST00000374949 MMP14P50281 582 aa13.52□□□□□ -0.25
HLA-DQA1-202ENST00000374949 SMC5Q8IY18 1101 aa13.52□□□□□ -0.25
HLA-DQA1-202ENST00000374949 HELBQ8NG08 1087 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQA1-202ENST00000374949 GCC1Q96CN9 775 aa13.52□□□□□ -0.25
HLA-DQA1-202ENST00000374949 JAG2Q9Y219 1238 aa13.52□□□□□ -0.25
HLA-DQA1-202ENST00000374949 LRRFIP2Q9Y608 721 aaKnown RBP13.52□□□□□ -0.25
HLA-DQA1-202ENST00000374949 RBBP6Q7Z6E9 1792 aaKnown RBP13.52□□□□□ -0.25
HLA-DQA1-202ENST00000374949 HTTP42858 3142 aa13.51□□□□□ -0.25
HLA-DQA1-202ENST00000374949 IGF2BP3O00425 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
HLA-DQA1-202ENST00000374949 CSF1RP07333 972 aa13.51□□□□□ -0.25
HLA-DQA1-202ENST00000374949 IFNL1Q8IU54 200 aa13.51□□□□□ -0.25
HLA-DQA1-202ENST00000374949 WNK4Q96J92 1243 aa13.51□□□□□ -0.25
HLA-DQA1-202ENST00000374949 TRIM17Q9Y577 477 aa13.51□□□□□ -0.25
HLA-DQA1-202ENST00000374949 ANKRD18BA2A2Z9 1011 aa13.5□□□□□ -0.25
HLA-DQA1-202ENST00000374949 MANSC4A6NHS7 340 aaPredicted RBP13.5□□□□□ -0.25
HLA-DQA1-202ENST00000374949 ALDH1A1P00352 501 aa13.5□□□□□ -0.25
HLA-DQA1-202ENST00000374949 CFAP100Q494V2 611 aa13.5□□□□□ -0.25
HLA-DQA1-202ENST00000374949 SLC10A4Q96EP9 437 aa13.5□□□□□ -0.25
HLA-DQA1-202ENST00000374949 DCTPP1Q9H773 170 aa13.5□□□□□ -0.25
HLA-DQA1-202ENST00000374949 VEZTQ9HBM0 779 aa13.5□□□□□ -0.25
HLA-DQA1-202ENST00000374949 CHMP3Q9Y3E7 222 aa13.5□□□□□ -0.25
HLA-DQA1-202ENST00000374949 PPP2R3BQ9Y5P8 575 aa13.5□□□□□ -0.25
HLA-DQA1-202ENST00000374949 SPDYE2BA6NHP3 402 aa13.49□□□□□ -0.25
HLA-DQA1-202ENST00000374949 SPDYE6P0CI01 402 aa13.49□□□□□ -0.25
HLA-DQA1-202ENST00000374949 ZBTB48P10074 688 aaPredicted RBP13.49□□□□□ -0.25
HLA-DQA1-202ENST00000374949 MAP3K11Q16584 847 aa13.49□□□□□ -0.25
HLA-DQA1-202ENST00000374949 ZNF804AQ7Z570 1209 aa13.49□□□□□ -0.25
HLA-DQA1-202ENST00000374949 KIAA0100Q14667 2235 aaKnown RBP13.49□□□□□ -0.25
HLA-DQA1-202ENST00000374949 MYO1BO43795 1136 aa13.48□□□□□ -0.25
HLA-DQA1-202ENST00000374949 PPP1R12BO60237 982 aaPredicted RBP13.48□□□□□ -0.25
HLA-DQA1-202ENST00000374949 IL1R1P14778 569 aa13.48□□□□□ -0.25
HLA-DQA1-202ENST00000374949 GJA5P36382 358 aa13.48□□□□□ -0.25
HLA-DQA1-202ENST00000374949 NBPF12Q5TAG4 269 aaPredicted RBP13.48□□□□□ -0.25
HLA-DQA1-202ENST00000374949 C15orf52Q6ZUT6 534 aaKnown RBP13.48□□□□□ -0.25
HLA-DQA1-202ENST00000374949 OTOP1Q7RTM1 612 aa13.48□□□□□ -0.25
HLA-DQA1-202ENST00000374949 MTMR14Q8NCE2 650 aa13.48□□□□□ -0.25
HLA-DQA1-202ENST00000374949 SUCLG2Q96I99 432 aa13.48□□□□□ -0.25
HLA-DQA1-202ENST00000374949 PRMT6Q96LA8 375 aaPredicted RBP13.48□□□□□ -0.25
HLA-DQA1-202ENST00000374949 POTEFA5A3E0 1075 aa13.47□□□□□ -0.25
HLA-DQA1-202ENST00000374949 FOXO4P98177 505 aa13.47□□□□□ -0.25
HLA-DQA1-202ENST00000374949 NUCB1Q02818 461 aa13.47□□□□□ -0.25
HLA-DQA1-202ENST00000374949 CRHR2Q13324 411 aa13.47□□□□□ -0.25
HLA-DQA1-202ENST00000374949 IFIT5Q13325 482 aaKnown RBP13.47□□□□□ -0.25
HLA-DQA1-202ENST00000374949 CD99L2Q8TCZ2 262 aa13.47□□□□□ -0.25
HLA-DQA1-202ENST00000374949 SSH3Q8TE77 659 aa13.47□□□□□ -0.25
HLA-DQA1-202ENST00000374949 ZNF594Q96JF6 807 aaPredicted RBP13.47□□□□□ -0.25
HLA-DQA1-202ENST00000374949 PNMA6EA0A0J9YXQ4 647 aa13.46□□□□□ -0.25
HLA-DQA1-202ENST00000374949 IREB2P48200 963 aaKnown RBP13.46□□□□□ -0.25
HLA-DQA1-202ENST00000374949 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.25
HLA-DQA1-202ENST00000374949 INHBEP58166 350 aa13.46□□□□□ -0.25
HLA-DQA1-202ENST00000374949 MTX1Q13505 466 aa13.46□□□□□ -0.25
HLA-DQA1-202ENST00000374949 POLA2Q14181 598 aa13.46□□□□□ -0.25
HLA-DQA1-202ENST00000374949 SUPT20HL1Q3ZLR7 823 aa13.46□□□□□ -0.25
HLA-DQA1-202ENST00000374949 EPHA10Q5JZY3 1008 aa13.46□□□□□ -0.25
HLA-DQA1-202ENST00000374949 ANKRD45Q5TZF3 282 aa13.46□□□□□ -0.25
HLA-DQA1-202ENST00000374949 CDAN1Q8IWY9 1227 aa13.46□□□□□ -0.25
HLA-DQA1-202ENST00000374949 SRGAP3O43295 1099 aa13.45□□□□□ -0.26
HLA-DQA1-202ENST00000374949 FKBP1AP62942 108 aaKnown RBP13.45□□□□□ -0.26
HLA-DQA1-202ENST00000374949 CAP1Q01518 475 aa13.45□□□□□ -0.26
HLA-DQA1-202ENST00000374949 RASA3Q14644 834 aa13.45□□□□□ -0.26
HLA-DQA1-202ENST00000374949 LMBR1LQ6UX01 489 aa13.45□□□□□ -0.26
HLA-DQA1-202ENST00000374949 CHD1LQ86WJ1 897 aa13.45□□□□□ -0.26
HLA-DQA1-202ENST00000374949 ERO1AQ96HE7 468 aa13.45□□□□□ -0.26
HLA-DQA1-202ENST00000374949 KAZALD1Q96I82 304 aa13.45□□□□□ -0.26
HLA-DQA1-202ENST00000374949 BICC1Q9H694 974 aaKnown RBP13.45□□□□□ -0.26
HLA-DQA1-202ENST00000374949 ELP3Q9H9T3 547 aa13.45□□□□□ -0.26
HLA-DQA1-202ENST00000374949 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQA1-202ENST00000374949 ZSWIM8A7E2V4 1837 aa13.45□□□□□ -0.26
HLA-DQA1-202ENST00000374949 USP2O75604 605 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQA1-202ENST00000374949 SPDYE2Q495Y8 402 aa13.44□□□□□ -0.26
HLA-DQA1-202ENST00000374949 TAF7LQ5H9L4 462 aa13.44□□□□□ -0.26
HLA-DQA1-202ENST00000374949 ANKRD13AQ8IZ07 590 aa13.44□□□□□ -0.26
HLA-DQA1-202ENST00000374949 PTPN18Q99952 460 aa13.44□□□□□ -0.26
HLA-DQA1-202ENST00000374949 PTPN22Q9Y2R2 807 aa13.44□□□□□ -0.26
HLA-DQA1-202ENST00000374949 GYG1P46976 350 aa13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 CENPFP49454 3210 aa13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 RGS3P49796 1198 aa13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 CCDC57Q2TAC2 916 aa13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 HSP90AB4PQ58FF6 505 aa13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 MFSD14BQ5SR56 506 aa13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 LDHAL6AQ6ZMR3 332 aa13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 SKAP1Q86WV1 359 aa13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 CNKSR2Q8WXI2 1034 aa13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 OPTNQ96CV9 577 aa13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 TDRD3Q9H7E2 651 aaKnown RBP13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 CNNM1Q9NRU3 951 aa13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 ZNF70Q9UC06 446 aaPredicted RBP13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 TTF2Q9UNY4 1162 aaKnown RBP13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 MKI67P46013 3256 aaKnown RBP13.43□□□□□ -0.26
HLA-DQA1-202ENST00000374949 FAM205AQ6ZU69 1335 aa13.42□□□□□ -0.26
HLA-DQA1-202ENST00000374949 BRCA2P51587 3418 aa13.42□□□□□ -0.26
HLA-DQA1-202ENST00000374949 UNCXA6NJT0 531 aa13.42□□□□□ -0.26
HLA-DQA1-202ENST00000374949 RAB11FIP3O75154 756 aa13.42□□□□□ -0.26
HLA-DQA1-202ENST00000374949 SURF6O75683 361 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms