RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 NBPF3Q9H094 633 aa21.45■■□□□ 1.02
RXRB-202ENST00000374685 LAMA4Q16363 1823 aa21.45■■□□□ 1.02
RXRB-202ENST00000374685 ANKRD36CQ5JPF3 1778 aa21.45■■□□□ 1.02
RXRB-202ENST00000374685 SENP2Q9HC62 589 aa21.45■■□□□ 1.02
RXRB-202ENST00000374685 DACT1Q9NYF0 836 aa21.45■■□□□ 1.02
RXRB-202ENST00000374685 RESTQ13127 1097 aa21.44■■□□□ 1.02
RXRB-202ENST00000374685 ANKRD18AQ8IVF6 992 aa21.44■■□□□ 1.02
RXRB-202ENST00000374685 MB21D2Q8IYB1 491 aaPredicted RBP21.44■■□□□ 1.02
RXRB-202ENST00000374685 NAPBQ9H115 298 aa21.44■■□□□ 1.02
RXRB-202ENST00000374685 MTERF4Q7Z6M4 381 aaKnown RBP21.44■■□□□ 1.02
RXRB-202ENST00000374685 AMIGO3Q86WK7 504 aa21.44■■□□□ 1.02
RXRB-202ENST00000374685 MICU3Q86XE3 530 aa21.44■■□□□ 1.02
RXRB-202ENST00000374685 CELF1Q92879 486 aaKnown RBP21.44■■□□□ 1.02
RXRB-202ENST00000374685 MEX3CQ5U5Q3 659 aaKnown RBP21.43■■□□□ 1.02
RXRB-202ENST00000374685 CYB5R4Q7L1T6 521 aa21.43■■□□□ 1.02
RXRB-202ENST00000374685 SMARCC2Q8TAQ2 1214 aa21.43■■□□□ 1.02
RXRB-202ENST00000374685 ZKSCAN3Q9BRR0 538 aa21.43■■□□□ 1.02
RXRB-202ENST00000374685 USP25Q9UHP3 1055 aa21.43■■□□□ 1.02
RXRB-202ENST00000374685 AKAP11Q9UKA4 1901 aa21.43■■□□□ 1.02
RXRB-202ENST00000374685 NRAPQ86VF7 1730 aa21.43■■□□□ 1.02
RXRB-202ENST00000374685 POLR3DP05423 398 aaPredicted RBP21.43■■□□□ 1.02
RXRB-202ENST00000374685 UBE3CQ15386 1083 aa21.43■■□□□ 1.02
RXRB-202ENST00000374685 NFXL1Q6ZNB6 911 aa21.43■■□□□ 1.02
RXRB-202ENST00000374685 STRBPQ96SI9 672 aaKnown RBP21.43■■□□□ 1.02
RXRB-202ENST00000374685 CDC5LQ99459 802 aaKnown RBP21.43■■□□□ 1.02
RXRB-202ENST00000374685 SCAND2PQ9GZW5 306 aaPredicted RBP21.43■■□□□ 1.02
RXRB-202ENST00000374685 RAI14Q9P0K7 980 aa21.43■■□□□ 1.02
RXRB-202ENST00000374685 PTMAP06454 111 aaKnown RBP21.42■■□□□ 1.02
RXRB-202ENST00000374685 CCNL1Q9UK58 526 aaPredicted RBP21.42■■□□□ 1.02
RXRB-202ENST00000374685 TDO2P48775 406 aa21.42■■□□□ 1.02
RXRB-202ENST00000374685 LCORLQ8N3X6 602 aa21.42■■□□□ 1.02
RXRB-202ENST00000374685 WNK3Q9BYP7 1800 aa21.42■■□□□ 1.02
RXRB-202ENST00000374685 TCRBV5S4A2TA0A5A2 114 aa21.42■■□□□ 1.02
RXRB-202ENST00000374685 SLC51AQ86UW1 340 aa21.42■■□□□ 1.02
RXRB-202ENST00000374685 NBPF5PQ86XG9 351 aaPredicted RBP21.42■■□□□ 1.02
RXRB-202ENST00000374685 ZNF274Q96GC6 653 aaPredicted RBP21.42■■□□□ 1.02
RXRB-202ENST00000374685 NEDD4P46934 1319 aa21.42■■□□□ 1.02
RXRB-202ENST00000374685 TAF1P21675 1872 aa21.41■■□□□ 1.02
RXRB-202ENST00000374685 ZPR1O75312 459 aa21.41■■□□□ 1.02
RXRB-202ENST00000374685 ADD1P35611 737 aaKnown RBP21.41■■□□□ 1.02
RXRB-202ENST00000374685 HMGN5P82970 282 aaKnown RBP21.41■■□□□ 1.02
RXRB-202ENST00000374685 AGXT2Q9BYV1 514 aa21.41■■□□□ 1.02
RXRB-202ENST00000374685 EPB41L4AQ9HCS5 686 aaPredicted RBP21.41■■□□□ 1.02
RXRB-202ENST00000374685 FDPSP14324 419 aaKnown RBP21.41■■□□□ 1.02
RXRB-202ENST00000374685 VPS72Q15906 364 aa21.41■■□□□ 1.02
RXRB-202ENST00000374685 SDR42E1Q8WUS8 393 aa21.41■■□□□ 1.02
RXRB-202ENST00000374685 PGBD1Q96JS3 809 aa21.41■■□□□ 1.02
RXRB-202ENST00000374685 AK7Q96M32 723 aa21.41■■□□□ 1.02
RXRB-202ENST00000374685 AIFM3Q96NN9 605 aa21.41■■□□□ 1.02
RXRB-202ENST00000374685 LLPHQ9BRT6 129 aaKnown RBP21.41■■□□□ 1.02
RXRB-202ENST00000374685 ORC3Q9UBD5 711 aaPredicted RBP21.41■■□□□ 1.02
RXRB-202ENST00000374685 SLC4A4Q9Y6R1 1079 aa21.41■■□□□ 1.02
RXRB-202ENST00000374685 IFNL3Q8IZI9 196 aa21.4■■□□□ 1.02
RXRB-202ENST00000374685 ZNF512BQ96KM6 892 aaPredicted RBP21.4■■□□□ 1.02
RXRB-202ENST00000374685 SETDB2Q96T68 719 aa21.4■■□□□ 1.02
RXRB-202ENST00000374685 NUP62CLQ9H1M0 184 aa21.4■■□□□ 1.02
RXRB-202ENST00000374685 COL4A1P02462 1669 aa21.4■■□□□ 1.02
RXRB-202ENST00000374685 CARMIL3Q8ND23 1372 aa21.4■■□□□ 1.02
RXRB-202ENST00000374685 ABCC12Q96J65 1359 aa21.4■■□□□ 1.02
RXRB-202ENST00000374685 NR1I2O75469 434 aa21.4■■□□□ 1.02
RXRB-202ENST00000374685 KLRK1P26718 216 aa21.4■■□□□ 1.02
RXRB-202ENST00000374685 CCDC82Q8N4S0 544 aa21.4■■□□□ 1.02
RXRB-202ENST00000374685 TFCP2L1Q9NZI6 479 aa21.4■■□□□ 1.02
RXRB-202ENST00000374685 KIF3AQ9Y496 699 aa21.4■■□□□ 1.02
RXRB-202ENST00000374685 BCL9LQ86UU0 1499 aa21.39■■□□□ 1.02
RXRB-202ENST00000374685 MINDY4BA8MYZ0 360 aa21.39■■□□□ 1.02
RXRB-202ENST00000374685 SMIM22K7EJ46 135 aa21.39■■□□□ 1.02
RXRB-202ENST00000374685 CYP7A1P22680 504 aa21.39■■□□□ 1.02
RXRB-202ENST00000374685 PHKBQ93100 1093 aa21.39■■□□□ 1.02
RXRB-202ENST00000374685 HPS5Q9UPZ3 1129 aa21.39■■□□□ 1.02
RXRB-202ENST00000374685 SPEF2Q9C093 1822 aa21.39■■□□□ 1.01
RXRB-202ENST00000374685 USP28Q96RU2 1077 aa21.39■■□□□ 1.01
RXRB-202ENST00000374685 BCL2L12Q9HB09 334 aa21.39■■□□□ 1.01
RXRB-202ENST00000374685 FAM13BQ9NYF5 915 aa21.39■■□□□ 1.01
RXRB-202ENST00000374685 NWD2Q9ULI1 1742 aa21.39■■□□□ 1.01
RXRB-202ENST00000374685 TNMDQ9H2S6 317 aa21.38■■□□□ 1.01
RXRB-202ENST00000374685 SLC4A8Q2Y0W8 1093 aa21.38■■□□□ 1.01
RXRB-202ENST00000374685 UTP14CQ5TAP6 766 aaKnown RBP21.38■■□□□ 1.01
RXRB-202ENST00000374685 C8orf76Q96K31 380 aa21.38■■□□□ 1.01
RXRB-202ENST00000374685 CHAF1AQ13111 956 aaPredicted RBP21.37■■□□□ 1.01
RXRB-202ENST00000374685 ADGRA1Q86SQ6 560 aa21.37■■□□□ 1.01
RXRB-202ENST00000374685 FBXW7Q969H0 707 aa21.37■■□□□ 1.01
RXRB-202ENST00000374685 MSNP26038 577 aaKnown RBP21.37■■□□□ 1.01
RXRB-202ENST00000374685 ZSCAN16Q9H4T2 348 aaPredicted RBP21.37■■□□□ 1.01
RXRB-202ENST00000374685 ANGEL1Q9UNK9 670 aaKnown RBP21.37■■□□□ 1.01
RXRB-202ENST00000374685 UBE2Q2LH0YL09 131 aa21.37■■□□□ 1.01
RXRB-202ENST00000374685 ME1P48163 572 aa21.37■■□□□ 1.01
RXRB-202ENST00000374685 TMEM67Q5HYA8 995 aa21.37■■□□□ 1.01
RXRB-202ENST00000374685 TICAM2Q86XR7 235 aa21.37■■□□□ 1.01
RXRB-202ENST00000374685 MINPP1Q9UNW1 487 aa21.37■■□□□ 1.01
RXRB-202ENST00000374685 PATL2C9JE40 543 aaKnown RBP21.36■■□□□ 1.01
RXRB-202ENST00000374685 METAP2P50579 478 aaKnown RBP eCLIP21.36■■□□□ 1.01
RXRB-202ENST00000374685 CLEC4GQ6UXB4 293 aa21.36■■□□□ 1.01
RXRB-202ENST00000374685 IFIT3O14879 490 aaKnown RBP21.36■■□□□ 1.01
RXRB-202ENST00000374685 MAP3K11Q16584 847 aa21.36■■□□□ 1.01
RXRB-202ENST00000374685 ERCC4Q92889 916 aaPredicted RBP21.36■■□□□ 1.01
RXRB-202ENST00000374685 CFAP45Q9UL16 551 aa21.36■■□□□ 1.01
RXRB-202ENST00000374685 RTCBQ9Y3I0 505 aaKnown RBP21.36■■□□□ 1.01
RXRB-202ENST00000374685 MYH7P12883 1935 aa21.35■■□□□ 1.01
RXRB-202ENST00000374685 A0A087WWV3 80 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms