RNA–Protein interactions for RNA: ENST00000374014.3

LINC00474-201, long intergenic non-protein coding RNA 474, humanhuman

TSL 1 (best) BASIC

Gene LINC00474, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474-201ENST00000374014 RUSC1Q9BVN2 902 aa7.57□□□□□ -1.2
LINC00474-201ENST00000374014 TMEM63CQ9P1W3 806 aa7.57□□□□□ -1.2
LINC00474-201ENST00000374014 PIM2Q9P1W9 311 aa7.57□□□□□ -1.2
LINC00474-201ENST00000374014 KANSL3Q9P2N6 904 aa7.57□□□□□ -1.2
LINC00474-201ENST00000374014 SALL4Q9UJQ4 1053 aa7.56□□□□□ -1.2
LINC00474-201ENST00000374014 ZNF777Q9ULD5 760 aaPredicted RBP7.56□□□□□ -1.2
LINC00474-201ENST00000374014 CDK11AQ9UQ88 783 aaPredicted RBP7.56□□□□□ -1.2
LINC00474-201ENST00000374014 EPRSP07814 1512 aaKnown RBP7.56□□□□□ -1.2
LINC00474-201ENST00000374014 GAS2O43903 313 aaKnown RBP7.55□□□□□ -1.2
LINC00474-201ENST00000374014 MAP4P27816 1152 aaKnown RBP7.55□□□□□ -1.2
LINC00474-201ENST00000374014 SLC7A3Q8WY07 619 aa7.55□□□□□ -1.2
LINC00474-201ENST00000374014 CNTN3Q9P232 1028 aa7.55□□□□□ -1.2
LINC00474-201ENST00000374014 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.55□□□□□ -1.2
LINC00474-201ENST00000374014 MEGF11A6BM72 1044 aa7.54□□□□□ -1.2
LINC00474-201ENST00000374014 NFKBIEO00221 500 aa7.54□□□□□ -1.2
LINC00474-201ENST00000374014 ZNF438Q7Z4V0 828 aa7.54□□□□□ -1.2
LINC00474-201ENST00000374014 ABI1Q8IZP0 508 aa7.54□□□□□ -1.2
LINC00474-201ENST00000374014 GIMAP7Q8NHV1 300 aa7.54□□□□□ -1.2
LINC00474-201ENST00000374014 NUDT16Q96DE0 195 aaKnown RBP7.54□□□□□ -1.2
LINC00474-201ENST00000374014 ATG3Q9NT62 314 aa7.54□□□□□ -1.2
LINC00474-201ENST00000374014 PTPN23Q9H3S7 1636 aa7.53□□□□□ -1.2
LINC00474-201ENST00000374014 ACPPP15309 386 aa7.53□□□□□ -1.2
LINC00474-201ENST00000374014 ITGAEP38570 1179 aa7.53□□□□□ -1.2
LINC00474-201ENST00000374014 ARL4DP49703 201 aa7.53□□□□□ -1.2
LINC00474-201ENST00000374014 SGO2Q562F6 1265 aa7.53□□□□□ -1.2
LINC00474-201ENST00000374014 LCE1DQ5T752 114 aa7.53□□□□□ -1.2
LINC00474-201ENST00000374014 DZANK1Q9NVP4 752 aa7.53□□□□□ -1.2
LINC00474-201ENST00000374014 LEMD3Q9Y2U8 911 aa7.53□□□□□ -1.2
LINC00474-201ENST00000374014 ROCK1Q13464 1354 aa7.53□□□□□ -1.2
LINC00474-201ENST00000374014 GRIN2AQ12879 1464 aa7.53□□□□□ -1.2
LINC00474-201ENST00000374014 NAIPQ13075 1403 aa7.52□□□□□ -1.2
LINC00474-201ENST00000374014 SYNJ2O15056 1496 aa7.52□□□□□ -1.21
LINC00474-201ENST00000374014 PDE2AO00408 941 aaPredicted RBP7.52□□□□□ -1.21
LINC00474-201ENST00000374014 F13BP05160 661 aa7.52□□□□□ -1.21
LINC00474-201ENST00000374014 CES1P23141 567 aa7.52□□□□□ -1.21
LINC00474-201ENST00000374014 C19orf57Q0VDD7 668 aa7.52□□□□□ -1.21
LINC00474-201ENST00000374014 FBXL6Q8N531 539 aa7.52□□□□□ -1.21
LINC00474-201ENST00000374014 C1orf127Q8N9H9 656 aa7.52□□□□□ -1.21
LINC00474-201ENST00000374014 SOX13Q9UN79 622 aa7.52□□□□□ -1.21
LINC00474-201ENST00000374014 ANGEL1Q9UNK9 670 aaKnown RBP7.52□□□□□ -1.21
LINC00474-201ENST00000374014 LRRIQ1Q96JM4 1722 aa7.52□□□□□ -1.21
LINC00474-201ENST00000374014 KIAA0556O60303 1618 aa7.52□□□□□ -1.21
LINC00474-201ENST00000374014 ARID1BQ8NFD5 2236 aaPredicted RBP7.51□□□□□ -1.21
LINC00474-201ENST00000374014 TRPA1O75762 1119 aa7.51□□□□□ -1.21
LINC00474-201ENST00000374014 PPP1R15AO75807 674 aaPredicted RBP7.51□□□□□ -1.21
LINC00474-201ENST00000374014 FOSL1P15407 271 aa7.51□□□□□ -1.21
LINC00474-201ENST00000374014 RXRBP28702 533 aa7.51□□□□□ -1.21
LINC00474-201ENST00000374014 MSMPQ1L6U9 139 aa7.51□□□□□ -1.21
LINC00474-201ENST00000374014 NUTM2GQ5VZR2 741 aa7.51□□□□□ -1.21
LINC00474-201ENST00000374014 HGSNATQ68CP4 663 aa7.51□□□□□ -1.21
LINC00474-201ENST00000374014 XKR5Q6UX68 686 aa7.51□□□□□ -1.21
LINC00474-201ENST00000374014 ATCAYQ86WG3 371 aa7.51□□□□□ -1.21
LINC00474-201ENST00000374014 C12orf50Q8NA57 414 aaPredicted RBP7.51□□□□□ -1.21
LINC00474-201ENST00000374014 HHIPQ96QV1 700 aa7.51□□□□□ -1.21
LINC00474-201ENST00000374014 CARMIL2Q6F5E8 1435 aa7.51□□□□□ -1.21
LINC00474-201ENST00000374014 GCC2Q8IWJ2 1684 aa7.51□□□□□ -1.21
LINC00474-201ENST00000374014 RPLP1P05386 114 aaKnown RBP7.5□□□□□ -1.21
LINC00474-201ENST00000374014 CPSF6Q16630 551 aaKnown RBP eCLIP7.5□□□□□ -1.21
LINC00474-201ENST00000374014 OSBPL1AQ9BXW6 950 aa7.5□□□□□ -1.21
LINC00474-201ENST00000374014 KRTAP4-7Q9BYR0 210 aa7.5□□□□□ -1.21
LINC00474-201ENST00000374014 CCDC39Q9UFE4 941 aa7.5□□□□□ -1.21
LINC00474-201ENST00000374014 DISP1Q96F81 1524 aa7.5□□□□□ -1.21
LINC00474-201ENST00000374014 EIF4G3O43432 1585 aaKnown RBP7.5□□□□□ -1.21
LINC00474-201ENST00000374014 ERCC6Q03468 1493 aa7.49□□□□□ -1.21
LINC00474-201ENST00000374014 TONSLQ96HA7 1378 aa7.49□□□□□ -1.21
LINC00474-201ENST00000374014 SRPK2P78362 688 aaKnown RBP7.49□□□□□ -1.21
LINC00474-201ENST00000374014 TMEM132AQ24JP5 1023 aa7.49□□□□□ -1.21
LINC00474-201ENST00000374014 TMEM164Q5U3C3 297 aa7.49□□□□□ -1.21
LINC00474-201ENST00000374014 TMEM102Q8N9M5 508 aaPredicted RBP7.49□□□□□ -1.21
LINC00474-201ENST00000374014 SMG8Q8ND04 991 aaKnown RBP7.49□□□□□ -1.21
LINC00474-201ENST00000374014 CLP1Q92989 425 aaKnown RBP7.49□□□□□ -1.21
LINC00474-201ENST00000374014 TMPRSS13Q9BYE2 586 aa7.49□□□□□ -1.21
LINC00474-201ENST00000374014 SUGCTQ9HAC7 445 aa7.49□□□□□ -1.21
LINC00474-201ENST00000374014 MAGI3Q5TCQ9 1506 aa7.48□□□□□ -1.21
LINC00474-201ENST00000374014 FAM95CA0A1B0GW59 222 aa7.48□□□□□ -1.21
LINC00474-201ENST00000374014 SOX1O00570 391 aaPredicted RBP7.48□□□□□ -1.21
LINC00474-201ENST00000374014 ATG7O95352 703 aa7.48□□□□□ -1.21
LINC00474-201ENST00000374014 TIAF1O95411 115 aa7.48□□□□□ -1.21
LINC00474-201ENST00000374014 PRNPP04156 253 aa7.48□□□□□ -1.21
LINC00474-201ENST00000374014 NUP160Q12769 1436 aa7.48□□□□□ -1.21
LINC00474-201ENST00000374014 IKBKEQ14164 716 aa7.48□□□□□ -1.21
LINC00474-201ENST00000374014 CBLL1Q75N03 491 aa7.48□□□□□ -1.21
LINC00474-201ENST00000374014 CYP4F12Q9HCS2 524 aa7.48□□□□□ -1.21
LINC00474-201ENST00000374014 RAPGEF6Q8TEU7 1601 aa7.48□□□□□ -1.21
LINC00474-201ENST00000374014 ZNF608Q9ULD9 1512 aaPredicted RBP7.47□□□□□ -1.21
LINC00474-201ENST00000374014 PTPRKQ15262 1439 aa7.47□□□□□ -1.21
LINC00474-201ENST00000374014 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.47□□□□□ -1.21
LINC00474-201ENST00000374014 NFKBIBQ15653 356 aa7.47□□□□□ -1.21
LINC00474-201ENST00000374014 OGFOD2Q6N063 350 aa7.47□□□□□ -1.21
LINC00474-201ENST00000374014 NFXL1Q6ZNB6 911 aa7.47□□□□□ -1.21
LINC00474-201ENST00000374014 VN1R5Q7Z5H4 357 aa7.47□□□□□ -1.21
LINC00474-201ENST00000374014 SHISA5Q8N114 240 aa7.47□□□□□ -1.21
LINC00474-201ENST00000374014 BSNDQ8WZ55 320 aa7.47□□□□□ -1.21
LINC00474-201ENST00000374014 EDEM1Q92611 657 aa7.47□□□□□ -1.21
LINC00474-201ENST00000374014 PMEPA1Q969W9 287 aa7.47□□□□□ -1.21
LINC00474-201ENST00000374014 NXPE3Q969Y0 559 aa7.47□□□□□ -1.21
LINC00474-201ENST00000374014 FBXL18Q96ME1 805 aa7.47□□□□□ -1.21
LINC00474-201ENST00000374014 GGNBP2Q9H3C7 697 aa7.47□□□□□ -1.21
LINC00474-201ENST00000374014 SEPT3Q9UH03 358 aa7.47□□□□□ -1.21
LINC00474-201ENST00000374014 GTF3C3Q9Y5Q9 886 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms