RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 ASTN2O75129 1339 aaPredicted RBP22.62■■□□□ 1.21
CDX4-201ENST00000373514 CDK5RAP2Q96SN8 1893 aa22.62■■□□□ 1.21
CDX4-201ENST00000373514 CHD1LQ86WJ1 897 aa22.62■■□□□ 1.21
CDX4-201ENST00000373514 DNAJC2Q99543 621 aaKnown RBP22.62■■□□□ 1.21
CDX4-201ENST00000373514 ANTXR1Q9H6X2 564 aa22.62■■□□□ 1.21
CDX4-201ENST00000373514 PIH1D3Q9NQM4 214 aaKnown RBP22.62■■□□□ 1.21
CDX4-201ENST00000373514 AOX1Q06278 1338 aa22.61■■□□□ 1.21
CDX4-201ENST00000373514 OGFOD1Q8N543 542 aa22.61■■□□□ 1.21
CDX4-201ENST00000373514 EDC3Q96F86 508 aaKnown RBP22.61■■□□□ 1.21
CDX4-201ENST00000373514 BOLA2Q9H3K6 86 aa22.61■■□□□ 1.21
CDX4-201ENST00000373514 ECHDC1Q9NTX5 307 aa22.61■■□□□ 1.21
CDX4-201ENST00000373514 HDAC9Q9UKV0 1011 aa22.61■■□□□ 1.21
CDX4-201ENST00000373514 LDHBP07195 334 aaKnown RBP22.6■■□□□ 1.21
CDX4-201ENST00000373514 ATP5JP18859 108 aa22.6■■□□□ 1.21
CDX4-201ENST00000373514 MX1P20591 662 aa22.6■■□□□ 1.21
CDX4-201ENST00000373514 DIXDC1Q155Q3 683 aa22.6■■□□□ 1.21
CDX4-201ENST00000373514 USP50Q70EL3 339 aaPredicted RBP22.6■■□□□ 1.21
CDX4-201ENST00000373514 CFAP100Q494V2 611 aa22.59■■□□□ 1.21
CDX4-201ENST00000373514 PNMA8AQ86V59 439 aaPredicted RBP22.59■■□□□ 1.21
CDX4-201ENST00000373514 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.59■■□□□ 1.21
CDX4-201ENST00000373514 CRKP46108 304 aa22.58■■□□□ 1.21
CDX4-201ENST00000373514 NBPF9Q3BBW0 867 aa22.58■■□□□ 1.21
CDX4-201ENST00000373514 ZGPATQ8N5A5 531 aaKnown RBP22.58■■□□□ 1.21
CDX4-201ENST00000373514 ZNF384Q8TF68 577 aa22.58■■□□□ 1.21
CDX4-201ENST00000373514 CLEC11AQ9Y240 323 aa22.58■■□□□ 1.21
CDX4-201ENST00000373514 RBM5P52756 815 aaKnown RBP eCLIP22.57■■□□□ 1.2
CDX4-201ENST00000373514 PI4K2BQ8TCG2 481 aa22.57■■□□□ 1.2
CDX4-201ENST00000373514 GPATCH3Q96I76 525 aa22.57■■□□□ 1.2
CDX4-201ENST00000373514 ZBED3Q96IU2 234 aaPredicted RBP22.57■■□□□ 1.2
CDX4-201ENST00000373514 SUGT1Q9Y2Z0 365 aa22.57■■□□□ 1.2
CDX4-201ENST00000373514 MAST3O60307 1309 aa22.57■■□□□ 1.2
CDX4-201ENST00000373514 TTC41PQ6P2S7 1318 aa22.57■■□□□ 1.2
CDX4-201ENST00000373514 GOLIM4O00461 696 aa22.57■■□□□ 1.2
CDX4-201ENST00000373514 WNT10BO00744 389 aa22.57■■□□□ 1.2
CDX4-201ENST00000373514 PDE4AP27815 886 aa22.57■■□□□ 1.2
CDX4-201ENST00000373514 MECOMQ03112 1051 aa22.57■■□□□ 1.2
CDX4-201ENST00000373514 ERICH6Q7L0X2 663 aa22.57■■□□□ 1.2
CDX4-201ENST00000373514 LDHDQ86WU2 507 aa22.57■■□□□ 1.2
CDX4-201ENST00000373514 DZIP1Q86YF9 867 aaKnown RBP22.57■■□□□ 1.2
CDX4-201ENST00000373514 RAI14Q9P0K7 980 aa22.57■■□□□ 1.2
CDX4-201ENST00000373514 SCAF8Q9UPN6 1271 aaKnown RBP22.57■■□□□ 1.2
CDX4-201ENST00000373514 FOCADQ5VW36 1801 aa22.56■■□□□ 1.2
CDX4-201ENST00000373514 TRPM7Q96QT4 1865 aa22.56■■□□□ 1.2
CDX4-201ENST00000373514 SPDYE2BA6NHP3 402 aa22.56■■□□□ 1.2
CDX4-201ENST00000373514 MAP4K4O95819 1239 aaPredicted RBP22.56■■□□□ 1.2
CDX4-201ENST00000373514 SPDYE6P0CI01 402 aa22.56■■□□□ 1.2
CDX4-201ENST00000373514 DLGAP5Q15398 846 aa22.56■■□□□ 1.2
CDX4-201ENST00000373514 MAP1SQ66K74 1059 aaPredicted RBP22.56■■□□□ 1.2
CDX4-201ENST00000373514 HAUS7Q99871 368 aa22.56■■□□□ 1.2
CDX4-201ENST00000373514 GGA3Q9NZ52 723 aa22.56■■□□□ 1.2
CDX4-201ENST00000373514 LRP2BPQ9P2M1 347 aa22.56■■□□□ 1.2
CDX4-201ENST00000373514 SERPINA10Q9UK55 444 aa22.56■■□□□ 1.2
CDX4-201ENST00000373514 PDE1AP54750 535 aa22.55■■□□□ 1.2
CDX4-201ENST00000373514 SPTY2D1Q68D10 685 aaPredicted RBP22.55■■□□□ 1.2
CDX4-201ENST00000373514 SKAP1Q86WV1 359 aa22.55■■□□□ 1.2
CDX4-201ENST00000373514 TEKT1Q969V4 418 aa22.55■■□□□ 1.2
CDX4-201ENST00000373514 PAG1Q9NWQ8 432 aa22.55■■□□□ 1.2
CDX4-201ENST00000373514 DAGLAQ9Y4D2 1042 aa22.55■■□□□ 1.2
CDX4-201ENST00000373514 TOMM70O94826 608 aa22.54■■□□□ 1.2
CDX4-201ENST00000373514 ANGEL2Q5VTE6 544 aaKnown RBP22.54■■□□□ 1.2
CDX4-201ENST00000373514 NSUN4Q96CB9 384 aaKnown RBP22.54■■□□□ 1.2
CDX4-201ENST00000373514 PRMT6Q96LA8 375 aaPredicted RBP22.54■■□□□ 1.2
CDX4-201ENST00000373514 CLRN2A0PK11 232 aa22.53■■□□□ 1.2
CDX4-201ENST00000373514 IDH1O75874 414 aaKnown RBP22.53■■□□□ 1.2
CDX4-201ENST00000373514 MTMR14Q8NCE2 650 aa22.53■■□□□ 1.2
CDX4-201ENST00000373514 CHADLQ6NUI6 762 aa22.52■■□□□ 1.2
CDX4-201ENST00000373514 PLEKHM2Q8IWE5 1019 aa22.52■■□□□ 1.2
CDX4-201ENST00000373514 RBM46Q8TBY0 533 aaKnown RBP22.52■■□□□ 1.2
CDX4-201ENST00000373514 MROH7-TTC4A0A0A0MT08 1334 aa22.52■■□□□ 1.2
CDX4-201ENST00000373514 GAKO14976 1311 aa22.52■■□□□ 1.2
CDX4-201ENST00000373514 MMP14P50281 582 aa22.52■■□□□ 1.19
CDX4-201ENST00000373514 HDLBPQ00341 1268 aaKnown RBP22.52■■□□□ 1.19
CDX4-201ENST00000373514 HHIPL2Q6UWX4 724 aa22.52■■□□□ 1.19
CDX4-201ENST00000373514 DLK2Q6UY11 383 aa22.52■■□□□ 1.19
CDX4-201ENST00000373514 ADGRA1Q86SQ6 560 aa22.52■■□□□ 1.19
CDX4-201ENST00000373514 TDRD3Q9H7E2 651 aaKnown RBP22.52■■□□□ 1.19
CDX4-201ENST00000373514 STAP2Q9UGK3 403 aa22.52■■□□□ 1.19
CDX4-201ENST00000373514 ERC2O15083 957 aa22.51■■□□□ 1.19
CDX4-201ENST00000373514 CHGBP05060 677 aa22.51■■□□□ 1.19
CDX4-201ENST00000373514 SMC1BQ8NDV3 1235 aa22.51■■□□□ 1.19
CDX4-201ENST00000373514 ZDHHC15Q96MV8 337 aa22.51■■□□□ 1.19
CDX4-201ENST00000373514 GLIS2Q9BZE0 524 aaPredicted RBP22.51■■□□□ 1.19
CDX4-201ENST00000373514 PGAP2Q9UHJ9 254 aa22.51■■□□□ 1.19
CDX4-201ENST00000373514 ADM5C9JUS6 153 aa22.5■■□□□ 1.19
CDX4-201ENST00000373514 GLRX3O76003 335 aaKnown RBP22.5■■□□□ 1.19
CDX4-201ENST00000373514 FMR1Q06787 632 aaKnown RBP eCLIP22.5■■□□□ 1.19
CDX4-201ENST00000373514 TTF1Q15361 905 aaPredicted RBP22.5■■□□□ 1.19
CDX4-201ENST00000373514 SLFNL1Q499Z3 407 aa22.5■■□□□ 1.19
CDX4-201ENST00000373514 APOBEC3HQ6NTF7 200 aaKnown RBP22.5■■□□□ 1.19
CDX4-201ENST00000373514 NAV1Q8NEY1 1877 aa22.49■■□□□ 1.19
CDX4-201ENST00000373514 CACNB3P54284 484 aa22.49■■□□□ 1.19
CDX4-201ENST00000373514 NAA16Q6N069 864 aaPredicted RBP22.49■■□□□ 1.19
CDX4-201ENST00000373514 MAGEB6Q8N7X4 407 aa22.49■■□□□ 1.19
CDX4-201ENST00000373514 ZC3H15Q8WU90 426 aaKnown RBP22.49■■□□□ 1.19
CDX4-201ENST00000373514 BTDP43251 543 aa22.48■■□□□ 1.19
CDX4-201ENST00000373514 SPDYE2Q495Y8 402 aa22.48■■□□□ 1.19
CDX4-201ENST00000373514 CNTROBQ8N137 903 aa22.48■■□□□ 1.19
CDX4-201ENST00000373514 DCPSQ96C86 337 aaKnown RBP22.48■■□□□ 1.19
CDX4-201ENST00000373514 MRIQ9BWK5 157 aa22.48■■□□□ 1.19
CDX4-201ENST00000373514 VEZTQ9HBM0 779 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms