RNA–Protein interactions for RNA: ENST00000373504.10

CHIC1-202, Transcript of cysteine rich hydrophobic domain 1, humanhuman

TSL 1 (best) BASIC

Gene CHIC1, Length 6,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1-202ENST00000373504 NOD1Q9Y239 953 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 LUC7L2Q9Y383 392 aaKnown RBP13.07□□□□□ -0.32
CHIC1-202ENST00000373504 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHIC1-202ENST00000373504 CCDC169A6NNP5 214 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 UTP14CQ5TAP6 766 aaKnown RBP13.07□□□□□ -0.32
CHIC1-202ENST00000373504 ZNF804AQ7Z570 1209 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 RHPN1Q8TCX5 695 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 TRIM31Q9BZY9 425 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 MCM9Q9NXL9 1143 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 SLC8A3P57103 927 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 DTHD1Q6ZMT9 781 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 ANKRD13DQ6ZTN6 518 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 CHRNA2Q15822 529 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 CPSF2Q9P2I0 782 aaKnown RBP13.07□□□□□ -0.32
CHIC1-202ENST00000373504 CTNND2Q9UQB3 1225 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 FAM170AA1A519 330 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 ATP5DP30049 168 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 ATP6V1AP38606 617 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 NACA2Q9H009 215 aa13.07□□□□□ -0.32
CHIC1-202ENST00000373504 MAN1A1P33908 653 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 DDX27Q96GQ7 796 aaKnown RBP13.06□□□□□ -0.32
CHIC1-202ENST00000373504 TSGA10Q9BZW7 698 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 KIAA1107Q9UPP5 1409 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 BUB1BO60566 1050 aaPredicted RBP13.06□□□□□ -0.32
CHIC1-202ENST00000373504 TNFAIP3P21580 790 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 LRRC43Q8N309 656 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 KIFAP3Q92845 792 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 MCUR1Q96AQ8 359 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 IFT74Q96LB3 600 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 CACYBPQ9HB71 228 aaKnown RBP13.06□□□□□ -0.32
CHIC1-202ENST00000373504 PIK3R4Q99570 1358 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 EPB41P11171 864 aaKnown RBP13.06□□□□□ -0.32
CHIC1-202ENST00000373504 IRX3P78415 501 aaPredicted RBP13.06□□□□□ -0.32
CHIC1-202ENST00000373504 TYRO3Q06418 890 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 GPIHBP1Q8IV16 184 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 WHAMMQ8TF30 809 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 TRAF5O00463 557 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 SNRPA1P09661 255 aaKnown RBP13.06□□□□□ -0.32
CHIC1-202ENST00000373504 APOBRQ0VD83 1088 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 KRBA2Q6ZNG9 492 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 CCDC89Q8N998 374 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 PPME1Q9Y570 386 aa13.06□□□□□ -0.32
CHIC1-202ENST00000373504 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
CHIC1-202ENST00000373504 SDSP20132 328 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 CSRNP2Q9H175 543 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 ANKFY1Q9P2R3 1169 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 F13A1P00488 732 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 GBP1P32455 592 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 BMP2KLQ5H9B9 411 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 LRRC9Q6ZRR7 1453 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 LMNTD2Q8IXW0 634 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 GSDMBQ8TAX9 411 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 USTQ9Y2C2 406 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 WDR46O15213 610 aaKnown RBP13.05□□□□□ -0.32
CHIC1-202ENST00000373504 CALML3P27482 149 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 CASC4Q6P4E1 433 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 MAEAQ7L5Y9 396 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 MAGEB6Q8N7X4 407 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 ZKSCAN3Q9BRR0 538 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 HDXQ7Z353 690 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 NLRP3Q96P20 1036 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 RABGAP1Q9Y3P9 1069 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 ZNF365Q70YC5 407 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 CHPF2Q9P2E5 772 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 RTL9Q8NET4 1388 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 SH2D4BQ5SQS7 431 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 AFAP1L2Q8N4X5 818 aa13.05□□□□□ -0.32
CHIC1-202ENST00000373504 ABCC11Q96J66 1382 aa13.04□□□□□ -0.32
CHIC1-202ENST00000373504 RIOK3O14730 519 aaKnown RBP13.04□□□□□ -0.32
CHIC1-202ENST00000373504 ZNF853P0CG23 659 aa13.04□□□□□ -0.32
CHIC1-202ENST00000373504 TRPC3Q13507 836 aa13.04□□□□□ -0.32
CHIC1-202ENST00000373504 KRT28Q7Z3Y7 464 aa13.04□□□□□ -0.32
CHIC1-202ENST00000373504 NOC4LQ9BVI4 516 aaKnown RBP13.04□□□□□ -0.32
CHIC1-202ENST00000373504 SWAP70Q9UH65 585 aa13.04□□□□□ -0.32
CHIC1-202ENST00000373504 NIP7Q9Y221 180 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHIC1-202ENST00000373504 VWA3AA6NCI4 1184 aa13.04□□□□□ -0.32
CHIC1-202ENST00000373504 STK10O94804 968 aaKnown RBP13.04□□□□□ -0.32
CHIC1-202ENST00000373504 PPP2R3AQ06190 1150 aa13.04□□□□□ -0.32
CHIC1-202ENST00000373504 ZNF174Q15697 407 aa13.04□□□□□ -0.32
CHIC1-202ENST00000373504 MBIPQ9NS73 344 aa13.04□□□□□ -0.32
CHIC1-202ENST00000373504 UTP11Q9Y3A2 253 aaKnown RBP13.04□□□□□ -0.32
CHIC1-202ENST00000373504 RPL13P26373 211 aaKnown RBP13.04□□□□□ -0.32
CHIC1-202ENST00000373504 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
CHIC1-202ENST00000373504 RAB3GAP1Q15042 981 aa13.04□□□□□ -0.32
CHIC1-202ENST00000373504 LETM2Q2VYF4 491 aa13.04□□□□□ -0.32
CHIC1-202ENST00000373504 SAP30BPQ9UHR5 308 aaKnown RBP13.04□□□□□ -0.32
CHIC1-202ENST00000373504 HELBQ8NG08 1087 aaPredicted RBP13.04□□□□□ -0.32
CHIC1-202ENST00000373504 CETN3O15182 167 aa13.03□□□□□ -0.32
CHIC1-202ENST00000373504 CCDC62Q6P9F0 684 aa13.03□□□□□ -0.32
CHIC1-202ENST00000373504 XAGE3Q8WTP9 111 aa13.03□□□□□ -0.32
CHIC1-202ENST00000373504 U2AF2P26368 475 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHIC1-202ENST00000373504 MAP7Q14244 749 aa13.03□□□□□ -0.32
CHIC1-202ENST00000373504 AFAP1L1Q8TED9 768 aa13.03□□□□□ -0.32
CHIC1-202ENST00000373504 CLNS1AP54105 237 aaKnown RBP13.03□□□□□ -0.32
CHIC1-202ENST00000373504 SV2BQ7L1I2 683 aa13.03□□□□□ -0.32
CHIC1-202ENST00000373504 ANKRD24Q8TF21 1146 aa13.03□□□□□ -0.32
CHIC1-202ENST00000373504 VPS16Q9H269 839 aa13.03□□□□□ -0.32
CHIC1-202ENST00000373504 PAG1Q9NWQ8 432 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms