RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 KRT79Q5XKE5 535 aa11.93□□□□□ -0.5
NUP188-201ENST00000372577 HELBQ8NG08 1087 aaPredicted RBP11.93□□□□□ -0.5
NUP188-201ENST00000372577 GNG11P61952 73 aa11.93□□□□□ -0.5
NUP188-201ENST00000372577 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.93□□□□□ -0.5
NUP188-201ENST00000372577 GLT8D2Q9H1C3 349 aa11.93□□□□□ -0.5
NUP188-201ENST00000372577 MAST3O60307 1309 aa11.93□□□□□ -0.5
NUP188-201ENST00000372577 ANKARQ7Z5J8 1434 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 HIBADHP31937 336 aaKnown RBP11.92□□□□□ -0.5
NUP188-201ENST00000372577 ZNF445P59923 1031 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 MIGA1Q8NAN2 632 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 PARP3Q9Y6F1 533 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 GPAA1O43292 621 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 BEND3Q5T5X7 828 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 TCERG1LQ5VWI1 586 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 SYCP3Q8IZU3 236 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 WDR66Q8TBY9 1149 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 SLAIN2Q9P270 581 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 SPHKAPQ2M3C7 1700 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 PPFIA3O75145 1194 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 FAM193AP78312 1265 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 ISM2Q6H9L7 571 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 CENPHQ9H3R5 247 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 DTHD1Q6ZMT9 781 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 DHX58Q96C10 678 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 OSBPL3Q9H4L5 887 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 STAP2Q9UGK3 403 aa11.92□□□□□ -0.5
NUP188-201ENST00000372577 ASIC1P78348 528 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 BMS1Q14692 1282 aaKnown RBP11.91□□□□□ -0.5
NUP188-201ENST00000372577 CLTCL1P53675 1640 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 AKR1B10O60218 316 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 USP8P40818 1118 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 KRT83P78385 493 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 CNBD1Q8NA66 436 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 NSFL1CQ9UNZ2 370 aaKnown RBP11.91□□□□□ -0.5
NUP188-201ENST00000372577 NPHP4O75161 1426 aaPredicted RBP11.91□□□□□ -0.5
NUP188-201ENST00000372577 A1BGP04217 495 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 CHST3Q7LGC8 479 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 FMNL3Q8IVF7 1028 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 FAM227BQ96M60 508 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 ZNF853P0CG23 659 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 SSR1P43307 286 aaKnown RBP11.91□□□□□ -0.5
NUP188-201ENST00000372577 CPSF1Q10570 1443 aaKnown RBP11.91□□□□□ -0.5
NUP188-201ENST00000372577 SHTN1A0MZ66 631 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 GNPATO15228 680 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 CCDC175P0C221 793 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 SMARCC2Q8TAQ2 1214 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 TBC1D5Q92609 795 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 CLSTN2Q9H4D0 955 aa11.91□□□□□ -0.5
NUP188-201ENST00000372577 PARP1P09874 1014 aaKnown RBP11.9□□□□□ -0.5
NUP188-201ENST00000372577 PLCD1P51178 756 aa11.9□□□□□ -0.5
NUP188-201ENST00000372577 ANO1Q5XXA6 986 aa11.9□□□□□ -0.5
NUP188-201ENST00000372577 CUTAO60888 179 aa11.9□□□□□ -0.5
NUP188-201ENST00000372577 MYL5Q02045 173 aa11.9□□□□□ -0.5
NUP188-201ENST00000372577 ZNF219Q9P2Y4 722 aaPredicted RBP11.9□□□□□ -0.5
NUP188-201ENST00000372577 SPDYE3A6NKU9 549 aa11.9□□□□□ -0.5
NUP188-201ENST00000372577 PRPHP41219 470 aa11.9□□□□□ -0.5
NUP188-201ENST00000372577 LZTS2Q9BRK4 669 aa11.9□□□□□ -0.5
NUP188-201ENST00000372577 GPR108Q9NPR9 543 aa11.9□□□□□ -0.5
NUP188-201ENST00000372577 STK24Q9Y6E0 443 aa11.9□□□□□ -0.5
NUP188-201ENST00000372577 PLVAPQ9BX97 442 aa11.9□□□□□ -0.51
NUP188-201ENST00000372577 SH2D4AQ9H788 454 aa11.9□□□□□ -0.51
NUP188-201ENST00000372577 GCOM1H8Y6P7 765 aaPredicted RBP11.89□□□□□ -0.51
NUP188-201ENST00000372577 MYZAPP0CAP1 466 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 GSPT1P15170 499 aaKnown RBP11.89□□□□□ -0.51
NUP188-201ENST00000372577 CCDC174Q6PII3 467 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 DNAJC10Q8IXB1 793 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 RNF17Q9BXT8 1623 aaKnown RBP11.89□□□□□ -0.51
NUP188-201ENST00000372577 ROBO2Q9HCK4 1378 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 B4E1Z4 1266 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 PICALMQ13492 652 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 CCDC129Q6ZRS4 1044 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 CCNL1Q9UK58 526 aaPredicted RBP11.89□□□□□ -0.51
NUP188-201ENST00000372577 SAMM50Q9Y512 469 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 B4DLN1 442 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 KRT13P13646 458 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 MRPL12P52815 198 aaKnown RBP11.89□□□□□ -0.51
NUP188-201ENST00000372577 ENOX2Q16206 610 aaKnown RBP11.89□□□□□ -0.51
NUP188-201ENST00000372577 CEP112Q8N8E3 955 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 SPATA5Q8NB90 893 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 SCLT1Q96NL6 688 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 SPAG5Q96R06 1193 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 BRD1O95696 1058 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 TUBBP07437 444 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 ARHGEF25Q86VW2 580 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 PCCAP05165 728 aaPredicted RBP11.89□□□□□ -0.51
NUP188-201ENST00000372577 KLHDC4Q8TBB5 520 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 DDX12PQ92771 950 aa11.89□□□□□ -0.51
NUP188-201ENST00000372577 SLC4A8Q2Y0W8 1093 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 TEX11Q8IYF3 940 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 ZNF274Q96GC6 653 aaPredicted RBP11.88□□□□□ -0.51
NUP188-201ENST00000372577 FAM107BQ9H098 131 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 COPRSQ9NQ92 184 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 SETBP1Q9Y6X0 1596 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 TRIM14Q14142 442 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 TAX1BP1Q86VP1 789 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 CNGA4Q8IV77 575 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 TACC1O75410 805 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 CPA1P15085 419 aa11.88□□□□□ -0.51
NUP188-201ENST00000372577 EZRP15311 586 aaKnown RBP11.88□□□□□ -0.51
NUP188-201ENST00000372577 ADGRL3Q9HAR2 1447 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 778.3 ms