RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 SPDYE3A6NKU9 549 aa27.02■■□□□ 1.92
RAPGEF1-203ENST00000372195 GNAQP50148 359 aa27.02■■□□□ 1.92
RAPGEF1-203ENST00000372195 TIMM10P62072 90 aa27.02■■□□□ 1.92
RAPGEF1-203ENST00000372195 UBLCP1Q8WVY7 318 aaPredicted RBP27.02■■□□□ 1.92
RAPGEF1-203ENST00000372195 RPS6KB1P23443 525 aa27.01■■□□□ 1.91
RAPGEF1-203ENST00000372195 FERMT1Q9BQL6 677 aa27.01■■□□□ 1.91
RAPGEF1-203ENST00000372195 PLVAPQ9BX97 442 aa27.01■■□□□ 1.91
RAPGEF1-203ENST00000372195 MAP3K5Q99683 1374 aa27.01■■□□□ 1.91
RAPGEF1-203ENST00000372195 SLC27A2O14975 620 aa27.01■■□□□ 1.91
RAPGEF1-203ENST00000372195 ERCC3P19447 782 aa27.01■■□□□ 1.91
RAPGEF1-203ENST00000372195 CCDC114Q96M63 670 aa27.01■■□□□ 1.91
RAPGEF1-203ENST00000372195 LINS1Q8NG48 757 aa27.01■■□□□ 1.91
RAPGEF1-203ENST00000372195 EYA1Q99502 592 aa27.01■■□□□ 1.91
RAPGEF1-203ENST00000372195 GPATCH8Q9UKJ3 1502 aaKnown RBP27.01■■□□□ 1.91
RAPGEF1-203ENST00000372195 PPM1EQ8WY54 764 aa27.01■■□□□ 1.91
RAPGEF1-203ENST00000372195 ZBTB7BO15156 539 aaPredicted RBP27■■□□□ 1.91
RAPGEF1-203ENST00000372195 LETM2Q2VYF4 491 aa27■■□□□ 1.91
RAPGEF1-203ENST00000372195 BICDL2A1A5D9 508 aa27■■□□□ 1.91
RAPGEF1-203ENST00000372195 RABEP2Q9H5N1 569 aa27■■□□□ 1.91
RAPGEF1-203ENST00000372195 DNAJC5BQ9UF47 199 aa27■■□□□ 1.91
RAPGEF1-203ENST00000372195 CCDC121Q6ZUS5 278 aa27■■□□□ 1.91
RAPGEF1-203ENST00000372195 SOS1Q07889 1333 aaPredicted RBP27■■□□□ 1.91
RAPGEF1-203ENST00000372195 CCDC122Q5T0U0 273 aa27■■□□□ 1.91
RAPGEF1-203ENST00000372195 FAM227BQ96M60 508 aa27■■□□□ 1.91
RAPGEF1-203ENST00000372195 GADD45BO75293 160 aaPredicted RBP27■■□□□ 1.91
RAPGEF1-203ENST00000372195 EIF6P56537 245 aaKnown RBP27■■□□□ 1.91
RAPGEF1-203ENST00000372195 CCDC160A6NGH7 325 aa26.99■■□□□ 1.91
RAPGEF1-203ENST00000372195 PPP2R3AQ06190 1150 aa26.99■■□□□ 1.91
RAPGEF1-203ENST00000372195 ZNF594Q96JF6 807 aaPredicted RBP26.99■■□□□ 1.91
RAPGEF1-203ENST00000372195 ARMT1Q9H993 441 aa26.99■■□□□ 1.91
RAPGEF1-203ENST00000372195 AKR1B15C9JRZ8 316 aaPredicted RBP26.99■■□□□ 1.91
RAPGEF1-203ENST00000372195 POLR3AO14802 1390 aaPredicted RBP26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 TNRQ92752 1358 aa26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 LUC7L2Q9Y383 392 aaKnown RBP26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 GPCPD1Q9NPB8 672 aa26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 PPP1R7Q15435 360 aa26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 SNX14Q9Y5W7 946 aa26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 ABCC1P33527 1531 aa26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 FAM160A1Q05DH4 1040 aa26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 BRAPQ7Z569 592 aa26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 LMBR1Q8WVP7 490 aa26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 NSFL1CQ9UNZ2 370 aaKnown RBP26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 GRM1Q13255 1194 aa26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 TTC31Q49AM3 519 aaPredicted RBP26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 MRRFQ96E11 262 aaKnown RBP26.98■■□□□ 1.91
RAPGEF1-203ENST00000372195 GNAT2P19087 354 aa26.97■■□□□ 1.91
RAPGEF1-203ENST00000372195 EVCP57679 992 aa26.97■■□□□ 1.91
RAPGEF1-203ENST00000372195 KRBA2Q6ZNG9 492 aa26.97■■□□□ 1.91
RAPGEF1-203ENST00000372195 NBPF11Q86T75 865 aa26.97■■□□□ 1.91
RAPGEF1-203ENST00000372195 ZBTB16Q05516 673 aa26.97■■□□□ 1.91
RAPGEF1-203ENST00000372195 ELP1O95163 1332 aa26.97■■□□□ 1.91
RAPGEF1-203ENST00000372195 CALML3P27482 149 aa26.97■■□□□ 1.91
RAPGEF1-203ENST00000372195 PIK3AP1Q6ZUJ8 805 aa26.96■■□□□ 1.91
RAPGEF1-203ENST00000372195 MYL10Q9BUA6 226 aa26.96■■□□□ 1.91
RAPGEF1-203ENST00000372195 CPLX4Q7Z7G2 160 aa26.96■■□□□ 1.91
RAPGEF1-203ENST00000372195 ANKS4BQ8N8V4 417 aa26.96■■□□□ 1.91
RAPGEF1-203ENST00000372195 FAM89AQ96GI7 184 aa26.96■■□□□ 1.91
RAPGEF1-203ENST00000372195 CHMP2AO43633 222 aa26.96■■□□□ 1.91
RAPGEF1-203ENST00000372195 WDHD1O75717 1129 aaPredicted RBP26.96■■□□□ 1.91
RAPGEF1-203ENST00000372195 INTS4Q96HW7 963 aaKnown RBP26.95■■□□□ 1.91
RAPGEF1-203ENST00000372195 RNMTO43148 476 aaKnown RBP26.95■■□□□ 1.91
RAPGEF1-203ENST00000372195 GTPBP4Q9BZE4 634 aaKnown RBP26.95■■□□□ 1.91
RAPGEF1-203ENST00000372195 A0A1W2PP64 1363 aa26.95■■□□□ 1.91
RAPGEF1-203ENST00000372195 MYL5Q02045 173 aa26.95■■□□□ 1.9
RAPGEF1-203ENST00000372195 NOC4LQ9BVI4 516 aaKnown RBP26.95■■□□□ 1.9
RAPGEF1-203ENST00000372195 SYCP2Q9BX26 1530 aa26.94■■□□□ 1.9
RAPGEF1-203ENST00000372195 KRT5P13647 590 aa26.94■■□□□ 1.9
RAPGEF1-203ENST00000372195 HPDP32754 393 aaPredicted RBP26.94■■□□□ 1.9
RAPGEF1-203ENST00000372195 USP37Q86T82 979 aa26.94■■□□□ 1.9
RAPGEF1-203ENST00000372195 IGSF22Q8N9C0 903 aa26.94■■□□□ 1.9
RAPGEF1-203ENST00000372195 CCDC77Q9BR77 488 aa26.94■■□□□ 1.9
RAPGEF1-203ENST00000372195 CCNT1O60563 726 aaKnown RBP26.94■■□□□ 1.9
RAPGEF1-203ENST00000372195 NPHP3Q7Z494 1330 aa26.94■■□□□ 1.9
RAPGEF1-203ENST00000372195 PRPHP41219 470 aa26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 PABPN1LA6NDY0 278 aaKnown RBP26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 LDHBP07195 334 aaKnown RBP26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 MRPS9P82933 396 aaKnown RBP26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 CTDSPL2Q05D32 466 aa26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 VTI1AQ96AJ9 217 aa26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 OGFRQ9NZT2 677 aa26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 RIOK3O14730 519 aaKnown RBP26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 C8orf37Q96NL8 207 aa26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 ATP6V0A2Q9Y487 856 aa26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 IQUBQ8NA54 791 aa26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 IMPG2Q9BZV3 1241 aa26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 PARP1P09874 1014 aaKnown RBP26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 HARSP12081 509 aaKnown RBP26.93■■□□□ 1.9
RAPGEF1-203ENST00000372195 RIMS2Q9UQ26 1411 aa26.92■■□□□ 1.9
RAPGEF1-203ENST00000372195 A0A1B0GUL7 405 aa26.92■■□□□ 1.9
RAPGEF1-203ENST00000372195 POLR2DO15514 142 aaKnown RBP26.92■■□□□ 1.9
RAPGEF1-203ENST00000372195 UAP1Q16222 522 aaPredicted RBP26.92■■□□□ 1.9
RAPGEF1-203ENST00000372195 SF3A3Q12874 501 aaKnown RBP eCLIP26.92■■□□□ 1.9
RAPGEF1-203ENST00000372195 HELLSQ9NRZ9 838 aa26.92■■□□□ 1.9
RAPGEF1-203ENST00000372195 HDAC9Q9UKV0 1011 aa26.92■■□□□ 1.9
RAPGEF1-203ENST00000372195 TRAF5O00463 557 aa26.92■■□□□ 1.9
RAPGEF1-203ENST00000372195 HOXC9P31274 260 aa26.92■■□□□ 1.9
RAPGEF1-203ENST00000372195 PDE4DQ08499 809 aa26.92■■□□□ 1.9
RAPGEF1-203ENST00000372195 CBX8Q9HC52 389 aa26.92■■□□□ 1.9
RAPGEF1-203ENST00000372195 EBAG9O00559 213 aa26.91■■□□□ 1.9
RAPGEF1-203ENST00000372195 SV2BQ7L1I2 683 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms