RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 COA1Q9GZY4 146 aa13.17□□□□□ -0.3
EXOSC1-203ENST00000370886 KIAA0100Q14667 2235 aaKnown RBP13.17□□□□□ -0.3
EXOSC1-203ENST00000370886 MED23Q9ULK4 1368 aa13.17□□□□□ -0.3
EXOSC1-203ENST00000370886 PITPNM2Q9BZ72 1349 aa13.16□□□□□ -0.3
EXOSC1-203ENST00000370886 A0A1B0GUL7 405 aa13.16□□□□□ -0.3
EXOSC1-203ENST00000370886 SMARCA5O60264 1052 aaPredicted RBP13.16□□□□□ -0.3
EXOSC1-203ENST00000370886 VIL1P09327 827 aaKnown RBP13.16□□□□□ -0.3
EXOSC1-203ENST00000370886 CHAF1AQ13111 956 aaPredicted RBP13.16□□□□□ -0.3
EXOSC1-203ENST00000370886 AAMPQ13685 434 aa13.16□□□□□ -0.3
EXOSC1-203ENST00000370886 ANGEL2Q5VTE6 544 aaKnown RBP13.16□□□□□ -0.3
EXOSC1-203ENST00000370886 FAM84BQ96KN1 310 aaPredicted RBP13.16□□□□□ -0.3
EXOSC1-203ENST00000370886 CCDC8Q9H0W5 538 aaPredicted RBP13.16□□□□□ -0.3
EXOSC1-203ENST00000370886 RWDD1Q9H446 243 aaPredicted RBP13.16□□□□□ -0.3
EXOSC1-203ENST00000370886 CD209Q9NNX6 404 aa13.16□□□□□ -0.3
EXOSC1-203ENST00000370886 PSME4Q14997 1843 aa13.16□□□□□ -0.3
EXOSC1-203ENST00000370886 MYH3P11055 1940 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 GPR25O00155 361 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 RAB11FIP3O75154 756 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 TBC1D8O95759 1140 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 FGFR2P21802 821 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 GTF2IP78347 998 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 TNNI3KQ59H18 835 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 PODNQ7Z5L7 613 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 AACSQ86V21 672 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 AGBL3Q8NEM8 1001 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 RHPN1Q8TCX5 695 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 KIF1BPQ96EK5 621 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 XAGE2Q96GT9 111 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 ZBTB47Q9UFB7 747 aaPredicted RBP13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 FPGT-TNNI3KV9GXZ4 949 aa13.15□□□□□ -0.3
EXOSC1-203ENST00000370886 USP17L3A6NCW0 530 aa13.14□□□□□ -0.31
EXOSC1-203ENST00000370886 USP17L4A6NCW7 530 aa13.14□□□□□ -0.31
EXOSC1-203ENST00000370886 ZNF280AP59817 542 aaPredicted RBP13.14□□□□□ -0.31
EXOSC1-203ENST00000370886 SREBF2Q12772 1141 aa13.14□□□□□ -0.31
EXOSC1-203ENST00000370886 HABP4Q5JVS0 413 aaKnown RBP13.14□□□□□ -0.31
EXOSC1-203ENST00000370886 B4GALNT3Q6L9W6 998 aa13.14□□□□□ -0.31
EXOSC1-203ENST00000370886 C15orf52Q6ZUT6 534 aaKnown RBP13.14□□□□□ -0.31
EXOSC1-203ENST00000370886 USP17L1Q7RTZ2 530 aa13.14□□□□□ -0.31
EXOSC1-203ENST00000370886 CLASRPQ8N2M8 674 aaKnown RBP13.14□□□□□ -0.31
EXOSC1-203ENST00000370886 MXD3Q9BW11 206 aa13.14□□□□□ -0.31
EXOSC1-203ENST00000370886 LRRCC1Q9C099 1032 aa13.14□□□□□ -0.31
EXOSC1-203ENST00000370886 DCTPP1Q9H773 170 aa13.14□□□□□ -0.31
EXOSC1-203ENST00000370886 GNL3LQ9NVN8 582 aaKnown RBP13.14□□□□□ -0.31
EXOSC1-203ENST00000370886 ASTN2O75129 1339 aaPredicted RBP13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 IGHDP01880 384 aa13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 IFIT2P09913 472 aaKnown RBP13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 NF2P35240 595 aa13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 PHKA1P46020 1223 aa13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 SCARF1Q14162 830 aa13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 TTLL5Q6EMB2 1281 aa13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 RSBN1LQ6PCB5 846 aaPredicted RBP13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 FBXO33Q7Z6M2 555 aa13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 EAF2Q96CJ1 260 aaPredicted RBP13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 DBNDD2Q9BQY9 259 aa13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 TLR7Q9NYK1 1049 aaKnown RBP13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 SPEF2Q9C093 1822 aa13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 IRS2Q9Y4H2 1338 aa13.13□□□□□ -0.31
EXOSC1-203ENST00000370886 FKTNO75072 461 aa13.12□□□□□ -0.31
EXOSC1-203ENST00000370886 TM4SF4P48230 202 aa13.12□□□□□ -0.31
EXOSC1-203ENST00000370886 HDAC1Q13547 482 aaPredicted RBP13.12□□□□□ -0.31
EXOSC1-203ENST00000370886 TTLL12Q14166 644 aaPredicted RBP13.12□□□□□ -0.31
EXOSC1-203ENST00000370886 TTC39AQ5SRH9 613 aa13.12□□□□□ -0.31
EXOSC1-203ENST00000370886 ANKRD45Q5TZF3 282 aa13.12□□□□□ -0.31
EXOSC1-203ENST00000370886 CCDC102BQ68D86 513 aa13.12□□□□□ -0.31
EXOSC1-203ENST00000370886 CFHR5Q9BXR6 569 aa13.12□□□□□ -0.31
EXOSC1-203ENST00000370886 MKI67P46013 3256 aaKnown RBP13.11□□□□□ -0.31
EXOSC1-203ENST00000370886 F8W031 263 aaPredicted RBP13.11□□□□□ -0.31
EXOSC1-203ENST00000370886 USP17L8P0C7I0 530 aa13.11□□□□□ -0.31
EXOSC1-203ENST00000370886 IL1R1P14778 569 aa13.11□□□□□ -0.31
EXOSC1-203ENST00000370886 CCDC158Q5M9N0 1113 aa13.11□□□□□ -0.31
EXOSC1-203ENST00000370886 TDRD7Q8NHU6 1098 aaKnown RBP13.11□□□□□ -0.31
EXOSC1-203ENST00000370886 MYOZ2Q9NPC6 264 aa13.11□□□□□ -0.31
EXOSC1-203ENST00000370886 GPR108Q9NPR9 543 aa13.11□□□□□ -0.31
EXOSC1-203ENST00000370886 DBNLQ9UJU6 430 aaKnown RBP13.11□□□□□ -0.31
EXOSC1-203ENST00000370886 RBBP6Q7Z6E9 1792 aaKnown RBP13.1□□□□□ -0.31
EXOSC1-203ENST00000370886 UBE2Q2LH0YL09 131 aa13.1□□□□□ -0.31
EXOSC1-203ENST00000370886 ALDH1A1P00352 501 aa13.1□□□□□ -0.31
EXOSC1-203ENST00000370886 STRIP1Q5VSL9 837 aa13.1□□□□□ -0.31
EXOSC1-203ENST00000370886 SNRKQ9NRH2 765 aa13.1□□□□□ -0.31
EXOSC1-203ENST00000370886 CEP290O15078 2479 aa13.1□□□□□ -0.31
EXOSC1-203ENST00000370886 DACT2Q5SW24 774 aa13.09□□□□□ -0.31
EXOSC1-203ENST00000370886 MOB2Q70IA6 237 aa13.09□□□□□ -0.31
EXOSC1-203ENST00000370886 KIAA0825Q8IV33 1275 aa13.09□□□□□ -0.31
EXOSC1-203ENST00000370886 UQCRFS1P1P0C7P4 283 aa13.08□□□□□ -0.32
EXOSC1-203ENST00000370886 RASGRF1Q13972 1273 aa13.08□□□□□ -0.32
EXOSC1-203ENST00000370886 MFSD14BQ5SR56 506 aa13.08□□□□□ -0.32
EXOSC1-203ENST00000370886 PI16Q6UXB8 463 aa13.08□□□□□ -0.32
EXOSC1-203ENST00000370886 ARMC9Q7Z3E5 817 aa13.08□□□□□ -0.32
EXOSC1-203ENST00000370886 DENND2AQ9ULE3 1009 aa13.08□□□□□ -0.32
EXOSC1-203ENST00000370886 HTTP42858 3142 aa13.08□□□□□ -0.32
EXOSC1-203ENST00000370886 MKRN3Q13064 507 aaKnown RBP13.07□□□□□ -0.32
EXOSC1-203ENST00000370886 OGFOD1Q8N543 542 aa13.07□□□□□ -0.32
EXOSC1-203ENST00000370886 CERS5Q8N5B7 392 aa13.07□□□□□ -0.32
EXOSC1-203ENST00000370886 CCDC136Q96JN2 1154 aa13.07□□□□□ -0.32
EXOSC1-203ENST00000370886 GMLQ99445 158 aa13.07□□□□□ -0.32
EXOSC1-203ENST00000370886 LNPKQ9C0E8 428 aa13.07□□□□□ -0.32
EXOSC1-203ENST00000370886 ABCF2Q9UG63 623 aa13.07□□□□□ -0.32
EXOSC1-203ENST00000370886 TRIM17Q9Y577 477 aa13.07□□□□□ -0.32
EXOSC1-203ENST00000370886 TRIOBPQ9H2D6 2365 aa13.07□□□□□ -0.32
EXOSC1-203ENST00000370886 KCNA4P22459 653 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms