RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 SREBF2Q12772 1141 aa16.53■□□□□ 0.24
RPF1-201ENST00000370654 IFNL1Q8IU54 200 aa16.53■□□□□ 0.24
RPF1-201ENST00000370654 TMEM39BQ9GZU3 492 aa16.53■□□□□ 0.24
RPF1-201ENST00000370654 SMC4Q9NTJ3 1288 aa16.53■□□□□ 0.24
RPF1-201ENST00000370654 HPS5Q9UPZ3 1129 aa16.53■□□□□ 0.24
RPF1-201ENST00000370654 ALDH1L2Q3SY69 923 aa16.52■□□□□ 0.24
RPF1-201ENST00000370654 SUPT20HL1Q3ZLR7 823 aa16.52■□□□□ 0.24
RPF1-201ENST00000370654 ATG9AQ7Z3C6 839 aa16.52■□□□□ 0.24
RPF1-201ENST00000370654 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.24
RPF1-201ENST00000370654 NOB1Q9ULX3 412 aaKnown RBP16.52■□□□□ 0.24
RPF1-201ENST00000370654 EYA2O00167 538 aa16.51■□□□□ 0.23
RPF1-201ENST00000370654 CAP1Q01518 475 aa16.51■□□□□ 0.23
RPF1-201ENST00000370654 VPS37DQ86XT2 251 aa16.51■□□□□ 0.23
RPF1-201ENST00000370654 PTPN18Q99952 460 aa16.51■□□□□ 0.23
RPF1-201ENST00000370654 CFHR5Q9BXR6 569 aa16.51■□□□□ 0.23
RPF1-201ENST00000370654 MANSC4A6NHS7 340 aaPredicted RBP16.51■□□□□ 0.23
RPF1-201ENST00000370654 CAVIN4Q5BKX8 364 aa16.51■□□□□ 0.23
RPF1-201ENST00000370654 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.51■□□□□ 0.23
RPF1-201ENST00000370654 ELP3Q9H9T3 547 aa16.51■□□□□ 0.23
RPF1-201ENST00000370654 LAMB1P07942 1786 aa16.5■□□□□ 0.23
RPF1-201ENST00000370654 FKTNO75072 461 aa16.5■□□□□ 0.23
RPF1-201ENST00000370654 FRAT2O75474 233 aaPredicted RBP16.5■□□□□ 0.23
RPF1-201ENST00000370654 ZBTB48P10074 688 aaPredicted RBP16.5■□□□□ 0.23
RPF1-201ENST00000370654 IREB2P48200 963 aaKnown RBP16.5■□□□□ 0.23
RPF1-201ENST00000370654 PUM3Q15397 648 aaKnown RBP16.5■□□□□ 0.23
RPF1-201ENST00000370654 NOM1Q5C9Z4 860 aaKnown RBP16.5■□□□□ 0.23
RPF1-201ENST00000370654 APOBEC3HQ6NTF7 200 aaKnown RBP16.5■□□□□ 0.23
RPF1-201ENST00000370654 SIL1Q9H173 461 aa16.5■□□□□ 0.23
RPF1-201ENST00000370654 ANKRD13AQ8IZ07 590 aa16.49■□□□□ 0.23
RPF1-201ENST00000370654 OPTNQ96CV9 577 aa16.49■□□□□ 0.23
RPF1-201ENST00000370654 PA2G4Q9UQ80 394 aaKnown RBP16.49■□□□□ 0.23
RPF1-201ENST00000370654 IFIT1P09914 478 aaKnown RBP16.48■□□□□ 0.23
RPF1-201ENST00000370654 TNFAIP1Q13829 316 aa16.48■□□□□ 0.23
RPF1-201ENST00000370654 TBC1D22AQ8WUA7 517 aa16.48■□□□□ 0.23
RPF1-201ENST00000370654 TEKT1Q969V4 418 aa16.48■□□□□ 0.23
RPF1-201ENST00000370654 MS4A4AQ96JQ5 239 aa16.48■□□□□ 0.23
RPF1-201ENST00000370654 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
RPF1-201ENST00000370654 TNRC18O15417 2968 aaPredicted RBP16.47■□□□□ 0.23
RPF1-201ENST00000370654 TESPA1A2RU30 521 aaPredicted RBP16.47■□□□□ 0.23
RPF1-201ENST00000370654 UNCXA6NJT0 531 aa16.47■□□□□ 0.23
RPF1-201ENST00000370654 UBTFL1P0CB47 393 aaPredicted RBP16.47■□□□□ 0.23
RPF1-201ENST00000370654 INHBEP58166 350 aa16.47■□□□□ 0.23
RPF1-201ENST00000370654 HDLBPQ00341 1268 aaKnown RBP16.47■□□□□ 0.23
RPF1-201ENST00000370654 CRHR2Q13324 411 aa16.47■□□□□ 0.23
RPF1-201ENST00000370654 VGLL4Q14135 290 aa16.47■□□□□ 0.23
RPF1-201ENST00000370654 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.47■□□□□ 0.23
RPF1-201ENST00000370654 ZDHHC15Q96MV8 337 aa16.47■□□□□ 0.23
RPF1-201ENST00000370654 MEIS3Q99687 375 aa16.47■□□□□ 0.23
RPF1-201ENST00000370654 TNNQ9UQP3 1299 aa16.47■□□□□ 0.23
RPF1-201ENST00000370654 KIF16BQ96L93 1317 aa16.46■□□□□ 0.23
RPF1-201ENST00000370654 SLC5A1P13866 664 aa16.46■□□□□ 0.23
RPF1-201ENST00000370654 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
RPF1-201ENST00000370654 PKN2Q16513 984 aaKnown RBP16.46■□□□□ 0.23
RPF1-201ENST00000370654 BRI3BPQ8WY22 251 aa16.46■□□□□ 0.23
RPF1-201ENST00000370654 LPIN2Q92539 896 aa16.46■□□□□ 0.23
RPF1-201ENST00000370654 ALDH1A1P00352 501 aa16.45■□□□□ 0.22
RPF1-201ENST00000370654 ADORA1P30542 326 aa16.45■□□□□ 0.22
RPF1-201ENST00000370654 MAP3K9P80192 1104 aa16.45■□□□□ 0.22
RPF1-201ENST00000370654 DIXDC1Q155Q3 683 aa16.45■□□□□ 0.22
RPF1-201ENST00000370654 FBXO46Q6PJ61 603 aaPredicted RBP16.45■□□□□ 0.22
RPF1-201ENST00000370654 MRIQ9BWK5 157 aa16.45■□□□□ 0.22
RPF1-201ENST00000370654 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.45■□□□□ 0.22
RPF1-201ENST00000370654 PRDX5P30044 214 aa16.44■□□□□ 0.22
RPF1-201ENST00000370654 PHKA1P46020 1223 aa16.44■□□□□ 0.22
RPF1-201ENST00000370654 OTOP1Q7RTM1 612 aa16.44■□□□□ 0.22
RPF1-201ENST00000370654 CD99L2Q8TCZ2 262 aa16.44■□□□□ 0.22
RPF1-201ENST00000370654 TRIM17Q9Y577 477 aa16.44■□□□□ 0.22
RPF1-201ENST00000370654 SNCAIPQ9Y6H5 919 aa16.44■□□□□ 0.22
RPF1-201ENST00000370654 CIAO1O76071 339 aa16.43■□□□□ 0.22
RPF1-201ENST00000370654 TNNI2P48788 182 aa16.43■□□□□ 0.22
RPF1-201ENST00000370654 ATP2B3Q16720 1220 aa16.43■□□□□ 0.22
RPF1-201ENST00000370654 HHIPL2Q6UWX4 724 aa16.43■□□□□ 0.22
RPF1-201ENST00000370654 FAM43AQ8N2R8 423 aa16.43■□□□□ 0.22
RPF1-201ENST00000370654 ZKSCAN4Q969J2 545 aaPredicted RBP16.43■□□□□ 0.22
RPF1-201ENST00000370654 OTUD5Q96G74 571 aa16.43■□□□□ 0.22
RPF1-201ENST00000370654 DAGLAQ9Y4D2 1042 aa16.43■□□□□ 0.22
RPF1-201ENST00000370654 MYH13Q9UKX3 1938 aa16.42■□□□□ 0.22
RPF1-201ENST00000370654 CCER2I3L3R5 266 aa16.42■□□□□ 0.22
RPF1-201ENST00000370654 CT47B1P0C2W7 299 aaPredicted RBP16.42■□□□□ 0.22
RPF1-201ENST00000370654 NFIAQ12857 509 aa16.42■□□□□ 0.22
RPF1-201ENST00000370654 CDC42EP5Q6NZY7 148 aa16.42■□□□□ 0.22
RPF1-201ENST00000370654 MIGA2Q7L4E1 593 aa16.42■□□□□ 0.22
RPF1-201ENST00000370654 API5Q9BZZ5 524 aaKnown RBP16.42■□□□□ 0.22
RPF1-201ENST00000370654 CEP126Q9P2H0 1117 aa16.42■□□□□ 0.22
RPF1-201ENST00000370654 SUGT1Q9Y2Z0 365 aa16.42■□□□□ 0.22
RPF1-201ENST00000370654 HTTP42858 3142 aa16.42■□□□□ 0.22
RPF1-201ENST00000370654 CCL15-CCL14A0A0B4J2E2 113 aa16.41■□□□□ 0.22
RPF1-201ENST00000370654 CCL15Q16663 113 aa16.41■□□□□ 0.22
RPF1-201ENST00000370654 FAM83AQ86UY5 434 aa16.41■□□□□ 0.22
RPF1-201ENST00000370654 ZFPM1Q8IX07 1006 aa16.41■□□□□ 0.22
RPF1-201ENST00000370654 WDR66Q8TBY9 1149 aa16.41■□□□□ 0.22
RPF1-201ENST00000370654 WRNIP1Q96S55 665 aa16.41■□□□□ 0.22
RPF1-201ENST00000370654 SPDYE5A6NIY4 337 aa16.4■□□□□ 0.22
RPF1-201ENST00000370654 TIMM10P62072 90 aa16.4■□□□□ 0.22
RPF1-201ENST00000370654 TCP10Q12799 353 aa16.4■□□□□ 0.22
RPF1-201ENST00000370654 INTS3Q68E01 1043 aaKnown RBP16.4■□□□□ 0.22
RPF1-201ENST00000370654 COPRSQ9NQ92 184 aa16.4■□□□□ 0.22
RPF1-201ENST00000370654 MAST3O60307 1309 aa16.4■□□□□ 0.22
RPF1-201ENST00000370654 BCAR3O75815 825 aa16.39■□□□□ 0.21
RPF1-201ENST00000370654 SLURP2P0DP57 97 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms