RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ATP5JP18859 108 aa16.77■□□□□ 0.28
SSR4-202ENST00000370085 GSTO1P78417 241 aa16.77■□□□□ 0.28
SSR4-202ENST00000370085 SCARF1Q14162 830 aa16.77■□□□□ 0.28
SSR4-202ENST00000370085 CFAP100Q494V2 611 aa16.77■□□□□ 0.28
SSR4-202ENST00000370085 ECHDC1Q9NTX5 307 aa16.77■□□□□ 0.28
SSR4-202ENST00000370085 IGHDP01880 384 aa16.76■□□□□ 0.27
SSR4-202ENST00000370085 LDHCP07864 332 aa16.76■□□□□ 0.27
SSR4-202ENST00000370085 PRDX5P30044 214 aa16.76■□□□□ 0.27
SSR4-202ENST00000370085 CRKP46108 304 aa16.76■□□□□ 0.27
SSR4-202ENST00000370085 TMED8Q6PL24 325 aaPredicted RBP16.76■□□□□ 0.27
SSR4-202ENST00000370085 HHIPL2Q6UWX4 724 aa16.76■□□□□ 0.27
SSR4-202ENST00000370085 SULF1Q8IWU6 871 aa16.76■□□□□ 0.27
SSR4-202ENST00000370085 SNRKQ9NRH2 765 aa16.76■□□□□ 0.27
SSR4-202ENST00000370085 RAI14Q9P0K7 980 aa16.76■□□□□ 0.27
SSR4-202ENST00000370085 AKAP11Q9UKA4 1901 aa16.76■□□□□ 0.27
SSR4-202ENST00000370085 TTC41PQ6P2S7 1318 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 PITPNM2Q9BZ72 1349 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 ADAMTSL1Q8N6G6 1762 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 SPDYE2BA6NHP3 402 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 WNT10BO00744 389 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 POTEIP0CG38 1075 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 POTEJP0CG39 1038 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 SPDYE6P0CI01 402 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 ZAP70P43403 619 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 HIRAP54198 1017 aaPredicted RBP16.75■□□□□ 0.27
SSR4-202ENST00000370085 ERICH6BQ5W0A0 696 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 B4GALNT3Q6L9W6 998 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 PI16Q6UXB8 463 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 CDC37L1Q7L3B6 337 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 CNTROBQ8N137 903 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 NOL10Q9BSC4 688 aaKnown RBP16.75■□□□□ 0.27
SSR4-202ENST00000370085 GGA3Q9NZ52 723 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 TMOD2Q9NZR1 351 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 PGAP2Q9UHJ9 254 aa16.75■□□□□ 0.27
SSR4-202ENST00000370085 MX1P20591 662 aa16.74■□□□□ 0.27
SSR4-202ENST00000370085 MAP3K12Q12852 859 aa16.74■□□□□ 0.27
SSR4-202ENST00000370085 MAP1SQ66K74 1059 aaPredicted RBP16.74■□□□□ 0.27
SSR4-202ENST00000370085 CHD1LQ86WJ1 897 aa16.74■□□□□ 0.27
SSR4-202ENST00000370085 APOBEC3FQ8IUX4 373 aaKnown RBP16.74■□□□□ 0.27
SSR4-202ENST00000370085 ZDHHC15Q96MV8 337 aa16.74■□□□□ 0.27
SSR4-202ENST00000370085 DNAJC2Q99543 621 aaKnown RBP16.74■□□□□ 0.27
SSR4-202ENST00000370085 ECM29Q5VYK3 1845 aa16.73■□□□□ 0.27
SSR4-202ENST00000370085 EGFRP00533 1210 aa16.73■□□□□ 0.27
SSR4-202ENST00000370085 CYP2E1P05181 493 aaPredicted RBP16.73■□□□□ 0.27
SSR4-202ENST00000370085 C1QTNF8P60827 252 aa16.73■□□□□ 0.27
SSR4-202ENST00000370085 NUCB1Q02818 461 aa16.73■□□□□ 0.27
SSR4-202ENST00000370085 TNFAIP1Q13829 316 aa16.73■□□□□ 0.27
SSR4-202ENST00000370085 NBPF9Q3BBW0 867 aa16.73■□□□□ 0.27
SSR4-202ENST00000370085 ANGEL2Q5VTE6 544 aaKnown RBP16.73■□□□□ 0.27
SSR4-202ENST00000370085 KRT26Q7Z3Y9 468 aa16.73■□□□□ 0.27
SSR4-202ENST00000370085 BOLA2Q9H3K6 86 aa16.73■□□□□ 0.27
SSR4-202ENST00000370085 MYH2Q9UKX2 1941 aa16.72■□□□□ 0.27
SSR4-202ENST00000370085 IDH1O75874 414 aaKnown RBP16.72■□□□□ 0.27
SSR4-202ENST00000370085 GLRX3O76003 335 aaKnown RBP16.72■□□□□ 0.27
SSR4-202ENST00000370085 MECOMQ03112 1051 aa16.72■□□□□ 0.27
SSR4-202ENST00000370085 GRIK5Q16478 980 aa16.72■□□□□ 0.27
SSR4-202ENST00000370085 LRRFIP1Q32MZ4 808 aaKnown RBP16.72■□□□□ 0.27
SSR4-202ENST00000370085 TBC1D9Q6ZT07 1266 aa16.72■□□□□ 0.27
SSR4-202ENST00000370085 ZBED3Q96IU2 234 aaPredicted RBP16.72■□□□□ 0.27
SSR4-202ENST00000370085 CCDC136Q96JN2 1154 aa16.72■□□□□ 0.27
SSR4-202ENST00000370085 HAUS7Q99871 368 aa16.72■□□□□ 0.27
SSR4-202ENST00000370085 LNPKQ9C0E8 428 aa16.72■□□□□ 0.27
SSR4-202ENST00000370085 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.72■□□□□ 0.27
SSR4-202ENST00000370085 PAG1Q9NWQ8 432 aa16.72■□□□□ 0.27
SSR4-202ENST00000370085 GOLIM4O00461 696 aa16.71■□□□□ 0.27
SSR4-202ENST00000370085 TNNI2P48788 182 aa16.71■□□□□ 0.27
SSR4-202ENST00000370085 NAA16Q6N069 864 aaPredicted RBP16.71■□□□□ 0.27
SSR4-202ENST00000370085 FAM163AQ96GL9 167 aaPredicted RBP16.71■□□□□ 0.27
SSR4-202ENST00000370085 PRMT6Q96LA8 375 aaPredicted RBP16.71■□□□□ 0.27
SSR4-202ENST00000370085 VEZTQ9HBM0 779 aa16.71■□□□□ 0.27
SSR4-202ENST00000370085 POLR2AP24928 1970 aaKnown RBP16.71■□□□□ 0.27
SSR4-202ENST00000370085 MAST2Q6P0Q8 1798 aa16.7■□□□□ 0.26
SSR4-202ENST00000370085 BAG3O95817 575 aa16.7■□□□□ 0.26
SSR4-202ENST00000370085 MAP4K4O95819 1239 aaPredicted RBP16.7■□□□□ 0.26
SSR4-202ENST00000370085 DIXDC1Q155Q3 683 aa16.7■□□□□ 0.26
SSR4-202ENST00000370085 ZSCAN25Q6NSZ9 544 aa16.7■□□□□ 0.26
SSR4-202ENST00000370085 CENPQQ7L2Z9 268 aaPredicted RBP16.7■□□□□ 0.26
SSR4-202ENST00000370085 CERS3Q8IU89 383 aa16.7■□□□□ 0.26
SSR4-202ENST00000370085 NSUN4Q96CB9 384 aaKnown RBP16.7■□□□□ 0.26
SSR4-202ENST00000370085 DAGLAQ9Y4D2 1042 aa16.7■□□□□ 0.26
SSR4-202ENST00000370085 PPP2R3BQ9Y5P8 575 aa16.7■□□□□ 0.26
SSR4-202ENST00000370085 MROH7-TTC4A0A0A0MT08 1334 aa16.7■□□□□ 0.26
SSR4-202ENST00000370085 PLCG2P16885 1265 aa16.69■□□□□ 0.26
SSR4-202ENST00000370085 NF2P35240 595 aa16.69■□□□□ 0.26
SSR4-202ENST00000370085 SPDYE2Q495Y8 402 aa16.69■□□□□ 0.26
SSR4-202ENST00000370085 USP48Q86UV5 1035 aa16.69■□□□□ 0.26
SSR4-202ENST00000370085 TDRD3Q9H7E2 651 aaKnown RBP16.69■□□□□ 0.26
SSR4-202ENST00000370085 ZNF70Q9UC06 446 aaPredicted RBP16.69■□□□□ 0.26
SSR4-202ENST00000370085 GAKO14976 1311 aa16.69■□□□□ 0.26
SSR4-202ENST00000370085 AOX1Q06278 1338 aa16.69■□□□□ 0.26
SSR4-202ENST00000370085 CLRN2A0PK11 232 aa16.68■□□□□ 0.26
SSR4-202ENST00000370085 PDE1AP54750 535 aa16.68■□□□□ 0.26
SSR4-202ENST00000370085 FKBP1CQ5VVH2 108 aa16.68■□□□□ 0.26
SSR4-202ENST00000370085 APOBEC3HQ6NTF7 200 aaKnown RBP16.68■□□□□ 0.26
SSR4-202ENST00000370085 GLIS2Q9BZE0 524 aaPredicted RBP16.68■□□□□ 0.26
SSR4-202ENST00000370085 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
SSR4-202ENST00000370085 STAP2Q9UGK3 403 aa16.68■□□□□ 0.26
SSR4-202ENST00000370085 NDUFB9Q9Y6M9 179 aa16.68■□□□□ 0.26
SSR4-202ENST00000370085 ITGBL1O95965 494 aaPredicted RBP16.67■□□□□ 0.26
SSR4-202ENST00000370085 BTDP43251 543 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms