RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 SSC5DA1L4H1 1573 aa12.38□□□□□ -0.43
TPM3-210ENST00000368530 IL1R1P14778 569 aa12.37□□□□□ -0.43
TPM3-210ENST00000368530 FKBP5Q13451 457 aaPredicted RBP12.37□□□□□ -0.43
TPM3-210ENST00000368530 EPHA10Q5JZY3 1008 aa12.37□□□□□ -0.43
TPM3-210ENST00000368530 BEND3Q5T5X7 828 aa12.37□□□□□ -0.43
TPM3-210ENST00000368530 ARMC9Q7Z3E5 817 aa12.37□□□□□ -0.43
TPM3-210ENST00000368530 HDAC9Q9UKV0 1011 aa12.37□□□□□ -0.43
TPM3-210ENST00000368530 ANKRD18BA2A2Z9 1011 aa12.37□□□□□ -0.43
TPM3-210ENST00000368530 SREBF2Q12772 1141 aa12.37□□□□□ -0.43
TPM3-210ENST00000368530 INTS3Q68E01 1043 aaKnown RBP12.37□□□□□ -0.43
TPM3-210ENST00000368530 PRMT6Q96LA8 375 aaPredicted RBP12.37□□□□□ -0.43
TPM3-210ENST00000368530 ANGEL1Q9UNK9 670 aaKnown RBP12.37□□□□□ -0.43
TPM3-210ENST00000368530 FKTNO75072 461 aa12.36□□□□□ -0.43
TPM3-210ENST00000368530 FKBP1AP62942 108 aaKnown RBP12.36□□□□□ -0.43
TPM3-210ENST00000368530 DLGAP5Q15398 846 aa12.36□□□□□ -0.43
TPM3-210ENST00000368530 FBXO46Q6PJ61 603 aaPredicted RBP12.36□□□□□ -0.43
TPM3-210ENST00000368530 CLMNQ96JQ2 1002 aa12.36□□□□□ -0.43
TPM3-210ENST00000368530 CHMP4BQ9H444 224 aaKnown RBP12.36□□□□□ -0.43
TPM3-210ENST00000368530 COL1A1P02452 1464 aaPredicted RBP12.35□□□□□ -0.43
TPM3-210ENST00000368530 KCNJ4P48050 445 aa12.35□□□□□ -0.43
TPM3-210ENST00000368530 CFAP100Q494V2 611 aa12.35□□□□□ -0.43
TPM3-210ENST00000368530 IFNL1Q8IU54 200 aa12.35□□□□□ -0.43
TPM3-210ENST00000368530 HTTP42858 3142 aa12.34□□□□□ -0.43
TPM3-210ENST00000368530 IGF2BP3O00425 579 aaKnown RBP eCLIP12.34□□□□□ -0.43
TPM3-210ENST00000368530 USP2O75604 605 aaPredicted RBP12.34□□□□□ -0.43
TPM3-210ENST00000368530 GJA5P36382 358 aa12.34□□□□□ -0.43
TPM3-210ENST00000368530 INHBEP58166 350 aa12.34□□□□□ -0.43
TPM3-210ENST00000368530 IFIT5Q13325 482 aaKnown RBP12.34□□□□□ -0.43
TPM3-210ENST00000368530 HDAC1Q13547 482 aaPredicted RBP12.34□□□□□ -0.43
TPM3-210ENST00000368530 NBPF12Q5TAG4 269 aaPredicted RBP12.34□□□□□ -0.43
TPM3-210ENST00000368530 PRPF38BQ5VTL8 546 aaKnown RBP12.34□□□□□ -0.43
TPM3-210ENST00000368530 LMBR1LQ6UX01 489 aa12.34□□□□□ -0.43
TPM3-210ENST00000368530 SLC10A4Q96EP9 437 aa12.34□□□□□ -0.43
TPM3-210ENST00000368530 ZNF594Q96JF6 807 aaPredicted RBP12.34□□□□□ -0.43
TPM3-210ENST00000368530 PCDH10Q9P2E7 1040 aa12.34□□□□□ -0.43
TPM3-210ENST00000368530 PPP2R3BQ9Y5P8 575 aa12.34□□□□□ -0.43
TPM3-210ENST00000368530 CLRN2A0PK11 232 aa12.33□□□□□ -0.44
TPM3-210ENST00000368530 MANSC4A6NHS7 340 aaPredicted RBP12.33□□□□□ -0.44
TPM3-210ENST00000368530 UNCXA6NJT0 531 aa12.33□□□□□ -0.44
TPM3-210ENST00000368530 ALDH1A1P00352 501 aa12.33□□□□□ -0.44
TPM3-210ENST00000368530 ZBTB48P10074 688 aaPredicted RBP12.33□□□□□ -0.44
TPM3-210ENST00000368530 WNK4Q96J92 1243 aa12.33□□□□□ -0.44
TPM3-210ENST00000368530 FAM205AQ6ZU69 1335 aa12.33□□□□□ -0.44
TPM3-210ENST00000368530 F8W031 263 aaPredicted RBP12.32□□□□□ -0.44
TPM3-210ENST00000368530 CAP1Q01518 475 aa12.32□□□□□ -0.44
TPM3-210ENST00000368530 ZNF804AQ7Z570 1209 aa12.32□□□□□ -0.44
TPM3-210ENST00000368530 TDRD7Q8NHU6 1098 aaKnown RBP12.32□□□□□ -0.44
TPM3-210ENST00000368530 KAZALD1Q96I82 304 aa12.32□□□□□ -0.44
TPM3-210ENST00000368530 MEIS3Q99687 375 aa12.32□□□□□ -0.44
TPM3-210ENST00000368530 PTPN18Q99952 460 aa12.32□□□□□ -0.44
TPM3-210ENST00000368530 JAG2Q9Y219 1238 aa12.32□□□□□ -0.44
TPM3-210ENST00000368530 TESPA1A2RU30 521 aaPredicted RBP12.32□□□□□ -0.44
TPM3-210ENST00000368530 GRM8O00222 908 aa12.32□□□□□ -0.44
TPM3-210ENST00000368530 PPP1R12BO60237 982 aaPredicted RBP12.32□□□□□ -0.44
TPM3-210ENST00000368530 RASA3Q14644 834 aa12.32□□□□□ -0.44
TPM3-210ENST00000368530 SUPT20HL1Q3ZLR7 823 aa12.32□□□□□ -0.44
TPM3-210ENST00000368530 LDHAL6AQ6ZMR3 332 aa12.32□□□□□ -0.44
TPM3-210ENST00000368530 OTOP1Q7RTM1 612 aa12.32□□□□□ -0.44
TPM3-210ENST00000368530 FAM84BQ96KN1 310 aaPredicted RBP12.32□□□□□ -0.44
TPM3-210ENST00000368530 A0A1B0GUL6 1792 aa12.31□□□□□ -0.44
TPM3-210ENST00000368530 PDE4AP27815 886 aa12.31□□□□□ -0.44
TPM3-210ENST00000368530 CDAN1Q8IWY9 1227 aa12.31□□□□□ -0.44
TPM3-210ENST00000368530 TEPSINQ96N21 525 aa12.31□□□□□ -0.44
TPM3-210ENST00000368530 PUS3Q9BZE2 481 aaKnown RBP12.31□□□□□ -0.44
TPM3-210ENST00000368530 LAMB1P07942 1786 aa12.3□□□□□ -0.44
TPM3-210ENST00000368530 GRIK5Q16478 980 aa12.3□□□□□ -0.44
TPM3-210ENST00000368530 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
TPM3-210ENST00000368530 SIRT2Q8IXJ6 389 aa12.3□□□□□ -0.44
TPM3-210ENST00000368530 MS4A4AQ96JQ5 239 aa12.3□□□□□ -0.44
TPM3-210ENST00000368530 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
TPM3-210ENST00000368530 RIPOR2Q9Y4F9 1068 aa12.3□□□□□ -0.44
TPM3-210ENST00000368530 MYO1BO43795 1136 aa12.29□□□□□ -0.44
TPM3-210ENST00000368530 GYG1P46976 350 aa12.29□□□□□ -0.44
TPM3-210ENST00000368530 CRHR2Q13324 411 aa12.29□□□□□ -0.44
TPM3-210ENST00000368530 UBE4AQ14139 1066 aa12.29□□□□□ -0.44
TPM3-210ENST00000368530 ANKRD13AQ8IZ07 590 aa12.29□□□□□ -0.44
TPM3-210ENST00000368530 VEZTQ9HBM0 779 aa12.29□□□□□ -0.44
TPM3-210ENST00000368530 ZNF70Q9UC06 446 aaPredicted RBP12.29□□□□□ -0.44
TPM3-210ENST00000368530 SERPINA10Q9UK55 444 aa12.29□□□□□ -0.44
TPM3-210ENST00000368530 TRIM17Q9Y577 477 aa12.29□□□□□ -0.44
TPM3-210ENST00000368530 MKI67P46013 3256 aaKnown RBP12.28□□□□□ -0.44
TPM3-210ENST00000368530 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
TPM3-210ENST00000368530 ALDH1L1O75891 902 aa12.28□□□□□ -0.44
TPM3-210ENST00000368530 IREB2P48200 963 aaKnown RBP12.28□□□□□ -0.44
TPM3-210ENST00000368530 MFSD14BQ5SR56 506 aa12.28□□□□□ -0.44
TPM3-210ENST00000368530 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.28□□□□□ -0.44
TPM3-210ENST00000368530 SMC5Q8IY18 1101 aa12.28□□□□□ -0.44
TPM3-210ENST00000368530 SUCLG2Q96I99 432 aa12.28□□□□□ -0.44
TPM3-210ENST00000368530 TDRD3Q9H7E2 651 aaKnown RBP12.28□□□□□ -0.44
TPM3-210ENST00000368530 CNNM1Q9NRU3 951 aa12.28□□□□□ -0.44
TPM3-210ENST00000368530 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.28□□□□□ -0.44
TPM3-210ENST00000368530 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
TPM3-210ENST00000368530 ECM29Q5VYK3 1845 aa12.28□□□□□ -0.44
TPM3-210ENST00000368530 UTYO14607 1347 aa12.28□□□□□ -0.44
TPM3-210ENST00000368530 NBPF7P0C2Y1 421 aaPredicted RBP12.27□□□□□ -0.44
TPM3-210ENST00000368530 HIBADHP31937 336 aaKnown RBP12.27□□□□□ -0.44
TPM3-210ENST00000368530 RBM5P52756 815 aaKnown RBP eCLIP12.27□□□□□ -0.44
TPM3-210ENST00000368530 FBXO33Q7Z6M2 555 aa12.27□□□□□ -0.44
TPM3-210ENST00000368530 CD99L2Q8TCZ2 262 aa12.27□□□□□ -0.44
TPM3-210ENST00000368530 BACH2Q9BYV9 841 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms