RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 WFDC3Q8IUB2 231 aa6.91□□□□□ -1.3
ECHDC1-201ENST00000368287 FNBP4Q8N3X1 1017 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-201ENST00000368287 ACTL7BQ9Y614 415 aa6.91□□□□□ -1.3
ECHDC1-201ENST00000368287 ACIN1Q9UKV3 1341 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-201ENST00000368287 GSTM4Q03013 218 aa6.9□□□□□ -1.3
ECHDC1-201ENST00000368287 CDCA8Q53HL2 280 aa6.9□□□□□ -1.3
ECHDC1-201ENST00000368287 LCE5AQ5TCM9 118 aa6.9□□□□□ -1.3
ECHDC1-201ENST00000368287 CAPN12Q6ZSI9 719 aa6.9□□□□□ -1.3
ECHDC1-201ENST00000368287 GLIS3Q8NEA6 775 aa6.9□□□□□ -1.3
ECHDC1-201ENST00000368287 NXPE3Q969Y0 559 aa6.9□□□□□ -1.3
ECHDC1-201ENST00000368287 MISP3Q96FF7 219 aa6.9□□□□□ -1.3
ECHDC1-201ENST00000368287 OSMRQ99650 979 aa6.9□□□□□ -1.3
ECHDC1-201ENST00000368287 RPLP1P05386 114 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-201ENST00000368287 BNIP3Q12983 259 aa6.89□□□□□ -1.31
ECHDC1-201ENST00000368287 FAM84AQ96KN4 292 aa6.89□□□□□ -1.31
ECHDC1-201ENST00000368287 SEMA6CQ9H3T2 930 aa6.89□□□□□ -1.31
ECHDC1-201ENST00000368287 ESRRAP11474 423 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-201ENST00000368287 FUT4P22083 530 aa6.88□□□□□ -1.31
ECHDC1-201ENST00000368287 DYMQ7RTS9 669 aa6.88□□□□□ -1.31
ECHDC1-201ENST00000368287 ASAP3Q8TDY4 903 aa6.88□□□□□ -1.31
ECHDC1-201ENST00000368287 PMEPA1Q969W9 287 aa6.88□□□□□ -1.31
ECHDC1-201ENST00000368287 ZKSCAN3Q9BRR0 538 aa6.88□□□□□ -1.31
ECHDC1-201ENST00000368287 C1orf115Q9H7X2 142 aa6.88□□□□□ -1.31
ECHDC1-201ENST00000368287 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-201ENST00000368287 EIF4EBP3O60516 100 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-201ENST00000368287 RNASE1P07998 156 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-201ENST00000368287 XKR5Q6UX68 686 aa6.87□□□□□ -1.31
ECHDC1-201ENST00000368287 BHLHE22Q8NFJ8 381 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-201ENST00000368287 TOX2Q96NM4 488 aa6.87□□□□□ -1.31
ECHDC1-201ENST00000368287 MBNL3Q9NUK0 354 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-201ENST00000368287 CXXC1Q9P0U4 656 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-201ENST00000368287 ARID3CA6NKF2 412 aa6.86□□□□□ -1.31
ECHDC1-201ENST00000368287 CD8BP10966 210 aa6.86□□□□□ -1.31
ECHDC1-201ENST00000368287 PCSK2P16519 638 aa6.86□□□□□ -1.31
ECHDC1-201ENST00000368287 MESP2Q0VG99 397 aa6.86□□□□□ -1.31
ECHDC1-201ENST00000368287 CFAP70Q5T0N1 1121 aa6.86□□□□□ -1.31
ECHDC1-201ENST00000368287 LILRA6Q6PI73 481 aa6.86□□□□□ -1.31
ECHDC1-201ENST00000368287 OGFOD3Q6PK18 319 aa6.86□□□□□ -1.31
ECHDC1-201ENST00000368287 TTC16Q8NEE8 873 aa6.86□□□□□ -1.31
ECHDC1-201ENST00000368287 ACSS3Q9H6R3 686 aa6.86□□□□□ -1.31
ECHDC1-201ENST00000368287 FAM105AQ9NUU6 356 aa6.86□□□□□ -1.31
ECHDC1-201ENST00000368287 NCANO14594 1321 aa6.85□□□□□ -1.31
ECHDC1-201ENST00000368287 CYP27C1Q4G0S4 372 aa6.85□□□□□ -1.31
ECHDC1-201ENST00000368287 AKAP4Q5JQC9 854 aa6.85□□□□□ -1.31
ECHDC1-201ENST00000368287 HP1BP3Q5SSJ5 553 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-201ENST00000368287 ATCAYQ86WG3 371 aa6.85□□□□□ -1.31
ECHDC1-201ENST00000368287 LRRN4CLQ8ND94 238 aa6.85□□□□□ -1.31
ECHDC1-201ENST00000368287 PI4K2BQ8TCG2 481 aa6.85□□□□□ -1.31
ECHDC1-201ENST00000368287 CHRDQ9H2X0 955 aa6.85□□□□□ -1.31
ECHDC1-201ENST00000368287 C1GALT1Q9NS00 363 aa6.85□□□□□ -1.31
ECHDC1-201ENST00000368287 ADAMTS6Q9UKP5 1117 aa6.85□□□□□ -1.31
ECHDC1-201ENST00000368287 ZNF777Q9ULD5 760 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-201ENST00000368287 AP4E1Q9UPM8 1137 aa6.85□□□□□ -1.31
ECHDC1-201ENST00000368287 LRRC10BA6NIK2 292 aa6.84□□□□□ -1.31
ECHDC1-201ENST00000368287 ZSCAN18Q8TBC5 510 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-201ENST00000368287 NETO1Q8TDF5 533 aa6.84□□□□□ -1.31
ECHDC1-201ENST00000368287 EDEM1Q92611 657 aa6.84□□□□□ -1.31
ECHDC1-201ENST00000368287 BHLHE41Q9C0J9 482 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-201ENST00000368287 RAD18Q9NS91 495 aa6.84□□□□□ -1.31
ECHDC1-201ENST00000368287 DAGLAQ9Y4D2 1042 aa6.84□□□□□ -1.31
ECHDC1-201ENST00000368287 A6NHS1 94 aa6.83□□□□□ -1.32
ECHDC1-201ENST00000368287 PRRG2O14669 202 aa6.83□□□□□ -1.32
ECHDC1-201ENST00000368287 EDN3P14138 238 aa6.83□□□□□ -1.32
ECHDC1-201ENST00000368287 ASPAP45381 313 aa6.83□□□□□ -1.32
ECHDC1-201ENST00000368287 RAP1GAPP47736 663 aa6.83□□□□□ -1.32
ECHDC1-201ENST00000368287 FAM69CQ0P6D2 419 aa6.83□□□□□ -1.32
ECHDC1-201ENST00000368287 C8orf34Q49A92 452 aa6.83□□□□□ -1.32
ECHDC1-201ENST00000368287 SEZ6L2Q6UXD5 910 aa6.83□□□□□ -1.32
ECHDC1-201ENST00000368287 PLD6Q8N2A8 252 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-201ENST00000368287 NRSN2Q9GZP1 204 aa6.83□□□□□ -1.32
ECHDC1-201ENST00000368287 LGR6Q9HBX8 967 aa6.83□□□□□ -1.32
ECHDC1-201ENST00000368287 B8ZZF3 427 aa6.82□□□□□ -1.32
ECHDC1-201ENST00000368287 DYNC1LI2O43237 492 aaPredicted RBP6.82□□□□□ -1.32
ECHDC1-201ENST00000368287 MAOBP27338 520 aa6.82□□□□□ -1.32
ECHDC1-201ENST00000368287 CFPP27918 469 aa6.82□□□□□ -1.32
ECHDC1-201ENST00000368287 DNM1Q05193 864 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-201ENST00000368287 CILP2Q8IUL8 1156 aa6.82□□□□□ -1.32
ECHDC1-201ENST00000368287 GGNBP2Q9H3C7 697 aa6.82□□□□□ -1.32
ECHDC1-201ENST00000368287 VAV3Q9UKW4 847 aa6.82□□□□□ -1.32
ECHDC1-201ENST00000368287 ZMIZ1Q9ULJ6 1067 aa6.82□□□□□ -1.32
ECHDC1-201ENST00000368287 EREGO14944 169 aa6.81□□□□□ -1.32
ECHDC1-201ENST00000368287 CYP11A1P05108 521 aa6.81□□□□□ -1.32
ECHDC1-201ENST00000368287 PRKCQQ04759 706 aa6.81□□□□□ -1.32
ECHDC1-201ENST00000368287 MLANAQ16655 118 aa6.81□□□□□ -1.32
ECHDC1-201ENST00000368287 FAM181AQ8N9Y4 354 aa6.81□□□□□ -1.32
ECHDC1-201ENST00000368287 STK32AQ8WU08 396 aa6.81□□□□□ -1.32
ECHDC1-201ENST00000368287 FAM53CQ9NYF3 392 aa6.81□□□□□ -1.32
ECHDC1-201ENST00000368287 PDGFAP04085 211 aa6.8□□□□□ -1.32
ECHDC1-201ENST00000368287 CTSBP07858 339 aa6.8□□□□□ -1.32
ECHDC1-201ENST00000368287 CD96P40200 585 aa6.8□□□□□ -1.32
ECHDC1-201ENST00000368287 POU4F3Q15319 338 aa6.8□□□□□ -1.32
ECHDC1-201ENST00000368287 ZSWIM9Q86XI8 627 aa6.8□□□□□ -1.32
ECHDC1-201ENST00000368287 LRRC56Q8IYG6 542 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-201ENST00000368287 ZFYVE1Q9HBF4 777 aa6.8□□□□□ -1.32
ECHDC1-201ENST00000368287 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.8□□□□□ -1.32
ECHDC1-201ENST00000368287 PHACTR2O75167 634 aa6.79□□□□□ -1.32
ECHDC1-201ENST00000368287 ELOAQ14241 798 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-201ENST00000368287 LCNL1Q6ZST4 164 aa6.79□□□□□ -1.32
ECHDC1-201ENST00000368287 PPP1R16BQ96T49 567 aa6.79□□□□□ -1.32
ECHDC1-201ENST00000368287 GSX1Q9H4S2 264 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms