RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 OSBPP22059 807 aa18.95■□□□□ 0.62
VAMP4-202ENST00000367740 MAP3K9P80192 1104 aa18.95■□□□□ 0.62
VAMP4-202ENST00000367740 U2AF1L4Q8WU68 220 aaKnown RBP18.95■□□□□ 0.62
VAMP4-202ENST00000367740 ANKRD2Q9GZV1 360 aa18.95■□□□□ 0.62
VAMP4-202ENST00000367740 CETPP11597 493 aa18.94■□□□□ 0.62
VAMP4-202ENST00000367740 IGHMBP2P38935 993 aaKnown RBP18.94■□□□□ 0.62
VAMP4-202ENST00000367740 PSMC4P43686 418 aa18.94■□□□□ 0.62
VAMP4-202ENST00000367740 TNFAIP1Q13829 316 aa18.94■□□□□ 0.62
VAMP4-202ENST00000367740 SPDYE2Q495Y8 402 aa18.94■□□□□ 0.62
VAMP4-202ENST00000367740 C17orf99Q6UX52 265 aa18.94■□□□□ 0.62
VAMP4-202ENST00000367740 RAET1EQ8TD07 263 aa18.94■□□□□ 0.62
VAMP4-202ENST00000367740 TRIM35Q9UPQ4 493 aa18.94■□□□□ 0.62
VAMP4-202ENST00000367740 CSADQ9Y600 493 aa18.94■□□□□ 0.62
VAMP4-202ENST00000367740 LAMA2P24043 3122 aaKnown RBP18.94■□□□□ 0.62
VAMP4-202ENST00000367740 SNAP23O00161 211 aa18.93■□□□□ 0.62
VAMP4-202ENST00000367740 RBM5P52756 815 aaKnown RBP eCLIP18.93■□□□□ 0.62
VAMP4-202ENST00000367740 FKBP1AP62942 108 aaKnown RBP18.93■□□□□ 0.62
VAMP4-202ENST00000367740 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
VAMP4-202ENST00000367740 ZNF70Q9UC06 446 aaPredicted RBP18.93■□□□□ 0.62
VAMP4-202ENST00000367740 SNCAIPQ9Y6H5 919 aa18.93■□□□□ 0.62
VAMP4-202ENST00000367740 MYPNQ86TC9 1320 aa18.93■□□□□ 0.62
VAMP4-202ENST00000367740 IGKV5-2P06315 115 aa18.92■□□□□ 0.62
VAMP4-202ENST00000367740 KCNJ4P48050 445 aa18.92■□□□□ 0.62
VAMP4-202ENST00000367740 TMEM39BQ9GZU3 492 aa18.92■□□□□ 0.62
VAMP4-202ENST00000367740 SPINK5Q9NQ38 1064 aaPredicted RBP18.92■□□□□ 0.62
VAMP4-202ENST00000367740 CPA4Q9UI42 421 aa18.92■□□□□ 0.62
VAMP4-202ENST00000367740 JAG2Q9Y219 1238 aa18.92■□□□□ 0.62
VAMP4-202ENST00000367740 ADGRA2Q96PE1 1338 aa18.92■□□□□ 0.62
VAMP4-202ENST00000367740 IL1R1P14778 569 aa18.91■□□□□ 0.62
VAMP4-202ENST00000367740 UBXN2AP68543 259 aa18.91■□□□□ 0.62
VAMP4-202ENST00000367740 CHRNDQ07001 517 aa18.91■□□□□ 0.62
VAMP4-202ENST00000367740 GDF15Q99988 308 aa18.91■□□□□ 0.62
VAMP4-202ENST00000367740 UNC93B1Q9H1C4 597 aa18.91■□□□□ 0.62
VAMP4-202ENST00000367740 TDRD3Q9H7E2 651 aaKnown RBP18.91■□□□□ 0.62
VAMP4-202ENST00000367740 MTMR10Q9NXD2 777 aa18.91■□□□□ 0.62
VAMP4-202ENST00000367740 IRF6O14896 467 aa18.9■□□□□ 0.62
VAMP4-202ENST00000367740 SGPL1O95470 568 aa18.9■□□□□ 0.62
VAMP4-202ENST00000367740 ITGA6P23229 1130 aa18.9■□□□□ 0.62
VAMP4-202ENST00000367740 HOXD10P28358 340 aa18.9■□□□□ 0.62
VAMP4-202ENST00000367740 BMP8BP34820 402 aa18.9■□□□□ 0.62
VAMP4-202ENST00000367740 SNAPC2Q13487 334 aa18.9■□□□□ 0.62
VAMP4-202ENST00000367740 C15orf52Q6ZUT6 534 aaKnown RBP18.9■□□□□ 0.62
VAMP4-202ENST00000367740 HELBQ8NG08 1087 aaPredicted RBP18.9■□□□□ 0.62
VAMP4-202ENST00000367740 CCER1Q8TC90 406 aaPredicted RBP18.9■□□□□ 0.62
VAMP4-202ENST00000367740 BIN2Q9UBW5 565 aaPredicted RBP18.9■□□□□ 0.62
VAMP4-202ENST00000367740 MAP3K2Q9Y2U5 619 aa18.9■□□□□ 0.62
VAMP4-202ENST00000367740 FMNL1O95466 1100 aaPredicted RBP18.89■□□□□ 0.61
VAMP4-202ENST00000367740 PRKCZQ05513 592 aa18.89■□□□□ 0.61
VAMP4-202ENST00000367740 ERO1BQ86YB8 467 aa18.89■□□□□ 0.61
VAMP4-202ENST00000367740 MPHOSPH8Q99549 860 aa18.89■□□□□ 0.61
VAMP4-202ENST00000367740 MBIPQ9NS73 344 aa18.89■□□□□ 0.61
VAMP4-202ENST00000367740 U3KPZ7 1027 aaPredicted RBP18.89■□□□□ 0.61
VAMP4-202ENST00000367740 TCP10L2B9ZVM9 353 aa18.88■□□□□ 0.61
VAMP4-202ENST00000367740 ZNF804AQ7Z570 1209 aa18.88■□□□□ 0.61
VAMP4-202ENST00000367740 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.88■□□□□ 0.61
VAMP4-202ENST00000367740 CCDC146Q8IYE0 955 aa18.88■□□□□ 0.61
VAMP4-202ENST00000367740 TAF5LO75529 589 aa18.87■□□□□ 0.61
VAMP4-202ENST00000367740 DDX58O95786 925 aaKnown RBP18.87■□□□□ 0.61
VAMP4-202ENST00000367740 PPIL2Q13356 520 aa18.87■□□□□ 0.61
VAMP4-202ENST00000367740 LRIT3Q3SXY7 679 aa18.87■□□□□ 0.61
VAMP4-202ENST00000367740 UBE3BQ7Z3V4 1068 aa18.87■□□□□ 0.61
VAMP4-202ENST00000367740 SLAIN1Q8ND83 568 aa18.87■□□□□ 0.61
VAMP4-202ENST00000367740 PRUNE2Q8WUY3 3088 aa18.87■□□□□ 0.61
VAMP4-202ENST00000367740 SERPINA10Q9UK55 444 aa18.87■□□□□ 0.61
VAMP4-202ENST00000367740 CWF19L2Q2TBE0 894 aaKnown RBP18.86■□□□□ 0.61
VAMP4-202ENST00000367740 ZKSCAN4Q969J2 545 aaPredicted RBP18.86■□□□□ 0.61
VAMP4-202ENST00000367740 WRNIP1Q96S55 665 aa18.86■□□□□ 0.61
VAMP4-202ENST00000367740 BCAMP50895 628 aa18.85■□□□□ 0.61
VAMP4-202ENST00000367740 ANKRD23Q86SG2 305 aa18.85■□□□□ 0.61
VAMP4-202ENST00000367740 DZIP1LQ8IYY4 767 aaKnown RBP18.85■□□□□ 0.61
VAMP4-202ENST00000367740 GABRQQ9UN88 632 aa18.85■□□□□ 0.61
VAMP4-202ENST00000367740 MUC3AQ02505 3323 aa18.84■□□□□ 0.61
VAMP4-202ENST00000367740 NEURL1BA8MQ27 555 aa18.84■□□□□ 0.61
VAMP4-202ENST00000367740 H7C1W4 665 aa18.84■□□□□ 0.61
VAMP4-202ENST00000367740 PDHXO00330 501 aa18.84■□□□□ 0.61
VAMP4-202ENST00000367740 ELL2O00472 640 aaPredicted RBP18.84■□□□□ 0.61
VAMP4-202ENST00000367740 TNNI2P48788 182 aa18.84■□□□□ 0.61
VAMP4-202ENST00000367740 PLA2G12BQ9BX93 195 aa18.84■□□□□ 0.61
VAMP4-202ENST00000367740 TTF2Q9UNY4 1162 aaKnown RBP18.84■□□□□ 0.61
VAMP4-202ENST00000367740 FAM205AQ6ZU69 1335 aa18.83■□□□□ 0.61
VAMP4-202ENST00000367740 PI4KAP2A4QPH2 592 aa18.83■□□□□ 0.6
VAMP4-202ENST00000367740 MFSD14BQ5SR56 506 aa18.83■□□□□ 0.6
VAMP4-202ENST00000367740 KSR2Q6VAB6 950 aa18.83■□□□□ 0.6
VAMP4-202ENST00000367740 PI4KAP1Q8N8J0 262 aa18.83■□□□□ 0.6
VAMP4-202ENST00000367740 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.83■□□□□ 0.6
VAMP4-202ENST00000367740 PAWRQ96IZ0 340 aaKnown RBP18.83■□□□□ 0.6
VAMP4-202ENST00000367740 DEFB118Q96PH6 123 aa18.83■□□□□ 0.6
VAMP4-202ENST00000367740 ZMYND8Q9ULU4 1186 aaPredicted RBP18.83■□□□□ 0.6
VAMP4-202ENST00000367740 TFRCP02786 760 aaKnown RBP18.82■□□□□ 0.6
VAMP4-202ENST00000367740 INHAP05111 366 aa18.82■□□□□ 0.6
VAMP4-202ENST00000367740 CSF1RP07333 972 aa18.82■□□□□ 0.6
VAMP4-202ENST00000367740 ZNF853P0CG23 659 aa18.82■□□□□ 0.6
VAMP4-202ENST00000367740 FCGRTP55899 365 aa18.82■□□□□ 0.6
VAMP4-202ENST00000367740 C7orf61Q8IZ16 206 aa18.82■□□□□ 0.6
VAMP4-202ENST00000367740 TDHQ8IZJ6 230 aa18.82■□□□□ 0.6
VAMP4-202ENST00000367740 DIS3LQ8TF46 1054 aaKnown RBP18.82■□□□□ 0.6
VAMP4-202ENST00000367740 CRISPLD2Q9H0B8 497 aa18.82■□□□□ 0.6
VAMP4-202ENST00000367740 PAK6Q9NQU5 681 aaPredicted RBP18.82■□□□□ 0.6
VAMP4-202ENST00000367740 DDX60LQ5H9U9 1706 aaKnown RBP18.82■□□□□ 0.6
VAMP4-202ENST00000367740 ADCY3O60266 1144 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms