RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 FSD1Q9BTV5 496 aa11.5□□□□□ -0.57
VTA1-201ENST00000367621 LSG1Q9H089 658 aaKnown RBP11.5□□□□□ -0.57
VTA1-201ENST00000367621 RFX7Q2KHR2 1363 aa11.5□□□□□ -0.57
VTA1-201ENST00000367621 A0A0D9SFI3 127 aa11.49□□□□□ -0.57
VTA1-201ENST00000367621 UQCRFS1P1P0C7P4 283 aa11.49□□□□□ -0.57
VTA1-201ENST00000367621 GYG1P46976 350 aa11.49□□□□□ -0.57
VTA1-201ENST00000367621 SLFNL1Q499Z3 407 aa11.49□□□□□ -0.57
VTA1-201ENST00000367621 CWC27Q6UX04 472 aaKnown RBP11.49□□□□□ -0.57
VTA1-201ENST00000367621 C15orf52Q6ZUT6 534 aaKnown RBP11.49□□□□□ -0.57
VTA1-201ENST00000367621 TXNRD3Q86VQ6 643 aa11.49□□□□□ -0.57
VTA1-201ENST00000367621 SP8Q8IXZ3 490 aa11.49□□□□□ -0.57
VTA1-201ENST00000367621 MASTLQ96GX5 879 aa11.49□□□□□ -0.57
VTA1-201ENST00000367621 PIH1D3Q9NQM4 214 aaKnown RBP11.49□□□□□ -0.57
VTA1-201ENST00000367621 PODXL2Q9NZ53 605 aa11.49□□□□□ -0.57
VTA1-201ENST00000367621 HIP1O00291 1037 aa11.48□□□□□ -0.57
VTA1-201ENST00000367621 FKBP4Q02790 459 aaKnown RBP eCLIP11.48□□□□□ -0.57
VTA1-201ENST00000367621 TMC4Q7Z404 712 aa11.48□□□□□ -0.57
VTA1-201ENST00000367621 C2CD5Q86YS7 1000 aa11.48□□□□□ -0.57
VTA1-201ENST00000367621 SPATA5Q8NB90 893 aa11.48□□□□□ -0.57
VTA1-201ENST00000367621 UPF2Q9HAU5 1272 aaKnown RBP11.48□□□□□ -0.57
VTA1-201ENST00000367621 DIAPH3Q9NSV4 1193 aa11.48□□□□□ -0.57
VTA1-201ENST00000367621 LEMD3Q9Y2U8 911 aa11.48□□□□□ -0.57
VTA1-201ENST00000367621 ATP6V0A2Q9Y487 856 aa11.48□□□□□ -0.57
VTA1-201ENST00000367621 XDHP47989 1333 aa11.48□□□□□ -0.57
VTA1-201ENST00000367621 MED23Q9ULK4 1368 aa11.48□□□□□ -0.57
VTA1-201ENST00000367621 C10orf71Q711Q0 1435 aa11.48□□□□□ -0.57
VTA1-201ENST00000367621 TAF1P21675 1872 aa11.48□□□□□ -0.57
VTA1-201ENST00000367621 ANKRD31Q8N7Z5 1873 aa11.48□□□□□ -0.57
VTA1-201ENST00000367621 COL1A1P02452 1464 aaPredicted RBP11.47□□□□□ -0.57
VTA1-201ENST00000367621 SOCS7O14512 581 aa11.47□□□□□ -0.57
VTA1-201ENST00000367621 PPEF1O14829 653 aaPredicted RBP11.47□□□□□ -0.57
VTA1-201ENST00000367621 RNF113AO15541 343 aaKnown RBP11.47□□□□□ -0.57
VTA1-201ENST00000367621 EIF5BO60841 1220 aaKnown RBP11.47□□□□□ -0.57
VTA1-201ENST00000367621 REC8O95072 547 aa11.47□□□□□ -0.57
VTA1-201ENST00000367621 ZBTB7AO95365 584 aa11.47□□□□□ -0.57
VTA1-201ENST00000367621 CHRNA5P30532 468 aa11.47□□□□□ -0.57
VTA1-201ENST00000367621 R3HDM1Q15032 1099 aaKnown RBP11.47□□□□□ -0.57
VTA1-201ENST00000367621 ZMYM1Q5SVZ6 1142 aa11.47□□□□□ -0.57
VTA1-201ENST00000367621 STYK1Q6J9G0 422 aa11.47□□□□□ -0.57
VTA1-201ENST00000367621 OLFM4Q6UX06 510 aa11.47□□□□□ -0.57
VTA1-201ENST00000367621 ZNF589Q86UQ0 364 aaPredicted RBP11.47□□□□□ -0.57
VTA1-201ENST00000367621 C7orf43Q8WVR3 580 aa11.47□□□□□ -0.57
VTA1-201ENST00000367621 IL17RAQ96F46 866 aa11.47□□□□□ -0.57
VTA1-201ENST00000367621 SEC62Q99442 399 aaKnown RBP11.47□□□□□ -0.57
VTA1-201ENST00000367621 POLLQ9UGP5 575 aa11.47□□□□□ -0.57
VTA1-201ENST00000367621 RAD50Q92878 1312 aa11.46□□□□□ -0.57
VTA1-201ENST00000367621 EPB41L2O43491 1005 aaKnown RBP11.46□□□□□ -0.57
VTA1-201ENST00000367621 KCNA3P22001 575 aa11.46□□□□□ -0.57
VTA1-201ENST00000367621 ATP2B4P23634 1241 aa11.46□□□□□ -0.57
VTA1-201ENST00000367621 ALDH1B1P30837 517 aa11.46□□□□□ -0.57
VTA1-201ENST00000367621 PTH1RQ03431 593 aa11.46□□□□□ -0.57
VTA1-201ENST00000367621 DSG2Q14126 1118 aa11.46□□□□□ -0.57
VTA1-201ENST00000367621 TBC1D16Q8TBP0 767 aa11.46□□□□□ -0.57
VTA1-201ENST00000367621 GPR101Q96P66 508 aaPredicted RBP11.46□□□□□ -0.57
VTA1-201ENST00000367621 ANKIB1Q9P2G1 1089 aa11.46□□□□□ -0.57
VTA1-201ENST00000367621 CASZ1Q86V15 1759 aa11.46□□□□□ -0.58
VTA1-201ENST00000367621 ARAP2Q8WZ64 1704 aa11.46□□□□□ -0.58
VTA1-201ENST00000367621 TCRBV5S4A2TA0A5A2 114 aa11.45□□□□□ -0.58
VTA1-201ENST00000367621 H0YIN7 160 aa11.45□□□□□ -0.58
VTA1-201ENST00000367621 HIBADHP31937 336 aaKnown RBP11.45□□□□□ -0.58
VTA1-201ENST00000367621 KCNJ4P48050 445 aa11.45□□□□□ -0.58
VTA1-201ENST00000367621 RUFY2Q8WXA3 655 aa11.45□□□□□ -0.58
VTA1-201ENST00000367621 KCNB2Q92953 911 aa11.45□□□□□ -0.58
VTA1-201ENST00000367621 OSBP2Q969R2 916 aa11.45□□□□□ -0.58
VTA1-201ENST00000367621 MTFR1LQ9H019 292 aa11.45□□□□□ -0.58
VTA1-201ENST00000367621 ANO2Q9NQ90 1003 aa11.45□□□□□ -0.58
VTA1-201ENST00000367621 HELLSQ9NRZ9 838 aa11.45□□□□□ -0.58
VTA1-201ENST00000367621 PALD1Q9ULE6 856 aa11.45□□□□□ -0.58
VTA1-201ENST00000367621 NSFL1CQ9UNZ2 370 aaKnown RBP11.45□□□□□ -0.58
VTA1-201ENST00000367621 IQSEC3Q9UPP2 1182 aaPredicted RBP11.45□□□□□ -0.58
VTA1-201ENST00000367621 PDS5AQ29RF7 1337 aaKnown RBP11.44□□□□□ -0.58
VTA1-201ENST00000367621 M0R2C6 588 aa11.44□□□□□ -0.58
VTA1-201ENST00000367621 SEMA3EO15041 775 aa11.44□□□□□ -0.58
VTA1-201ENST00000367621 UFL1O94874 794 aa11.44□□□□□ -0.58
VTA1-201ENST00000367621 ADD2P35612 726 aa11.44□□□□□ -0.58
VTA1-201ENST00000367621 ANP32AP39687 249 aaKnown RBP11.44□□□□□ -0.58
VTA1-201ENST00000367621 TTF1Q15361 905 aaPredicted RBP11.44□□□□□ -0.58
VTA1-201ENST00000367621 MCMDC2Q4G0Z9 681 aa11.44□□□□□ -0.58
VTA1-201ENST00000367621 CAVIN4Q5BKX8 364 aa11.44□□□□□ -0.58
VTA1-201ENST00000367621 PRPF40BQ6NWY9 871 aaKnown RBP11.44□□□□□ -0.58
VTA1-201ENST00000367621 CCDC129Q6ZRS4 1044 aa11.44□□□□□ -0.58
VTA1-201ENST00000367621 TDRD7Q8NHU6 1098 aaKnown RBP11.44□□□□□ -0.58
VTA1-201ENST00000367621 MAP4K1Q92918 833 aa11.44□□□□□ -0.58
VTA1-201ENST00000367621 ZNF622Q969S3 477 aaKnown RBP eCLIP11.44□□□□□ -0.582e-6■■■□□ 15.2
VTA1-201ENST00000367621 GNL3LQ9NVN8 582 aaKnown RBP11.44□□□□□ -0.58
VTA1-201ENST00000367621 GGA1Q9UJY5 639 aa11.44□□□□□ -0.58
VTA1-201ENST00000367621 WWC3Q9ULE0 1092 aa11.44□□□□□ -0.58
VTA1-201ENST00000367621 SPEF2Q9C093 1822 aa11.44□□□□□ -0.58
VTA1-201ENST00000367621 A0A1B0GUL6 1792 aa11.44□□□□□ -0.58
VTA1-201ENST00000367621 SNED1Q8TER0 1413 aa11.43□□□□□ -0.58
VTA1-201ENST00000367621 COL11A2P13942 1736 aaPredicted RBP11.43□□□□□ -0.58
VTA1-201ENST00000367621 MAST3O60307 1309 aa11.43□□□□□ -0.58
VTA1-201ENST00000367621 CCDC171Q6TFL3 1326 aa11.43□□□□□ -0.58
VTA1-201ENST00000367621 FOXP2O15409 715 aa11.43□□□□□ -0.58
VTA1-201ENST00000367621 ZFYP08048 801 aaPredicted RBP11.43□□□□□ -0.58
VTA1-201ENST00000367621 PDE6AP16499 860 aa11.43□□□□□ -0.58
VTA1-201ENST00000367621 HSPA4P34932 840 aa11.43□□□□□ -0.58
VTA1-201ENST00000367621 ZNF384Q8TF68 577 aa11.43□□□□□ -0.58
VTA1-201ENST00000367621 IPO9Q96P70 1041 aaKnown RBP11.43□□□□□ -0.58
VTA1-201ENST00000367621 DENND2AQ9ULE3 1009 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms