RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 DTHD1Q6ZMT9 781 aa13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 C6orf229H3BNL8 230 aa13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 CEP152O94986 1710 aa13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 MBD5Q9P267 1494 aa13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 PUM3Q15397 648 aaKnown RBP13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 ERO1AQ96HE7 468 aa13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 NAPAP54920 295 aa13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 KRT79Q5XKE5 535 aa13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 GOPCQ9HD26 462 aa13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 TTF2Q9UNY4 1162 aaKnown RBP13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 BICC1Q9H694 974 aaKnown RBP13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 CROCCP2Q86T23 111 aa13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 CPLX3Q8WVH0 158 aa13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 LRRC45Q96CN5 670 aa13.61□□□□□ -0.23
CDC42BPA-203ENST00000366766 QRICH2Q9H0J4 1663 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 SPDYE3A6NKU9 549 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 KIF4AO95239 1232 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 TPTE2Q6XPS3 522 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 HS2ST1Q7LGA3 356 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 EYA2O00167 538 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 MLKLQ8NB16 471 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 HDAC9Q9UKV0 1011 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 DENND2AQ9ULE3 1009 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 HSPA4P34932 840 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 MSANTD4Q8NCY6 345 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 CUTAO60888 179 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 NEK11Q8NG66 645 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 GCP02774 474 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 ZNF790Q6PG37 636 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 MAATS1Q7Z4T9 603 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 LMAN1P49257 510 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 HDXQ7Z353 690 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 APPBP2Q92624 585 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 FERMT2Q96AC1 680 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 NUP58Q9BVL2 599 aa13.6□□□□□ -0.23
CDC42BPA-203ENST00000366766 RPGRIP1Q96KN7 1286 aa13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 CCDC113Q9H0I3 377 aa13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 CLSTN2Q9H4D0 955 aa13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 KBTBD3Q8NAB2 608 aa13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 OGFRQ9NZT2 677 aa13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 TNNC1P63316 161 aa13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 CNNM4Q6P4Q7 775 aa13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 CCDC144CPQ8IYA2 1237 aa13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 TSPYL6Q8N831 410 aa13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 AKR1B15C9JRZ8 316 aaPredicted RBP13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 LMOD1P29536 600 aaPredicted RBP13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 NFATC2IPQ8NCF5 419 aa13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 NGLY1Q96IV0 654 aa13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 IMPG2Q9BZV3 1241 aa13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 REREQ9P2R6 1566 aa13.59□□□□□ -0.23
CDC42BPA-203ENST00000366766 ARHGAP31Q2M1Z3 1444 aa13.58□□□□□ -0.24
CDC42BPA-203ENST00000366766 PLEKHG3A1L390 1219 aa13.58□□□□□ -0.24
CDC42BPA-203ENST00000366766 CTNNBL1Q8WYA6 563 aaPredicted RBP13.58□□□□□ -0.24
CDC42BPA-203ENST00000366766 DSCC1Q9BVC3 393 aa13.58□□□□□ -0.24
CDC42BPA-203ENST00000366766 NUCKS1Q9H1E3 243 aaKnown RBP13.58□□□□□ -0.24
CDC42BPA-203ENST00000366766 HEATR3Q7Z4Q2 680 aa13.58□□□□□ -0.24
CDC42BPA-203ENST00000366766 BAG1Q99933 345 aaPredicted RBP13.58□□□□□ -0.24
CDC42BPA-203ENST00000366766 KDRP35968 1356 aa13.58□□□□□ -0.24
CDC42BPA-203ENST00000366766 NDC80O14777 642 aa13.58□□□□□ -0.24
CDC42BPA-203ENST00000366766 TNNI3KQ59H18 835 aa13.58□□□□□ -0.24
CDC42BPA-203ENST00000366766 SH2D4AQ9H788 454 aa13.58□□□□□ -0.24
CDC42BPA-203ENST00000366766 FPGT-TNNI3KV9GXZ4 949 aa13.58□□□□□ -0.24
CDC42BPA-203ENST00000366766 MLH3Q9UHC1 1453 aa13.58□□□□□ -0.24
CDC42BPA-203ENST00000366766 ATP6V1AP38606 617 aa13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 UBXN1Q04323 297 aa13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 MROH5Q6ZUA9 1318 aa13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 RGS12O14924 1447 aa13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 ARHGAP6O43182 974 aa13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 MARCKSP29966 332 aaPredicted RBP13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 ANO1Q5XXA6 986 aa13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 AFMP43652 599 aa13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 TFCP2Q12800 502 aa13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 SLC27A2O14975 620 aa13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 TSKSQ9UJT2 592 aa13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 KIAA1210Q9ULL0 1709 aa13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 MAST3O60307 1309 aa13.57□□□□□ -0.24
CDC42BPA-203ENST00000366766 PCP11498 1178 aaKnown RBP13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 FCHSD1Q86WN1 690 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 PANK2Q9BZ23 570 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 MTRF1LQ9UGC7 380 aaKnown RBP13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 EBAG9O00559 213 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 CCDC84Q86UT8 332 aaPredicted RBP13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 DHX37Q8IY37 1157 aaKnown RBP13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 PPM1EQ8WY54 764 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 IRS4O14654 1257 aaPredicted RBP13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 NT5C2P49902 561 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 DZIP3Q86Y13 1208 aaKnown RBP13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 IFNKQ9P0W0 207 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 SH3TC1Q8TE82 1336 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 ERVK-7P63135 1459 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 ATP5DP30049 168 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.243e-27■■■■■ 35.2
CDC42BPA-203ENST00000366766 PRPF4BQ13523 1007 aaKnown RBP13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 HAUS3Q68CZ6 603 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.56□□□□□ -0.242e-7■■□□□ 12.9
CDC42BPA-203ENST00000366766 MAGEB6Q8N7X4 407 aa13.56□□□□□ -0.24
CDC42BPA-203ENST00000366766 CACNA1FO60840 1977 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms