RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
YBX3-203ENST00000366286 PANK1Q8TE04 598 aa12.85□□□□□ -0.35
YBX3-203ENST00000366286 ZIC5Q96T25 663 aa12.85□□□□□ -0.35
YBX3-203ENST00000366286 DEFB129Q9H1M3 183 aa12.85□□□□□ -0.35
YBX3-203ENST00000366286 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.85□□□□□ -0.35
YBX3-203ENST00000366286 AK9Q5TCS8 1911 aa12.85□□□□□ -0.35
YBX3-203ENST00000366286 DOCK2Q92608 1830 aa12.85□□□□□ -0.35
YBX3-203ENST00000366286 MAST3O60307 1309 aa12.85□□□□□ -0.35
YBX3-203ENST00000366286 TTLL12Q14166 644 aaPredicted RBP12.84□□□□□ -0.35
YBX3-203ENST00000366286 POLA2Q14181 598 aa12.84□□□□□ -0.35
YBX3-203ENST00000366286 RASAL3Q86YV0 1011 aa12.84□□□□□ -0.35
YBX3-203ENST00000366286 CCDC102AQ96A19 550 aa12.84□□□□□ -0.35
YBX3-203ENST00000366286 TDRD3Q9H7E2 651 aaKnown RBP12.84□□□□□ -0.35
YBX3-203ENST00000366286 ZNF70Q9UC06 446 aaPredicted RBP12.84□□□□□ -0.35
YBX3-203ENST00000366286 PPP2R3BQ9Y5P8 575 aa12.84□□□□□ -0.35
YBX3-203ENST00000366286 CASP8AP2Q9UKL3 1982 aa12.83□□□□□ -0.35
YBX3-203ENST00000366286 A0A1B0GUL7 405 aa12.83□□□□□ -0.36
YBX3-203ENST00000366286 UBE2Q2LH0YL09 131 aa12.83□□□□□ -0.36
YBX3-203ENST00000366286 ZBTB7BO15156 539 aaPredicted RBP12.83□□□□□ -0.36
YBX3-203ENST00000366286 LBX1P52954 281 aa12.83□□□□□ -0.36
YBX3-203ENST00000366286 TIMM10P62072 90 aa12.83□□□□□ -0.36
YBX3-203ENST00000366286 HDLBPQ00341 1268 aaKnown RBP12.83□□□□□ -0.36
YBX3-203ENST00000366286 PRKG1Q13976 671 aa12.83□□□□□ -0.36
YBX3-203ENST00000366286 CCDC102BQ68D86 513 aa12.83□□□□□ -0.36
YBX3-203ENST00000366286 WDR66Q8TBY9 1149 aa12.83□□□□□ -0.36
YBX3-203ENST00000366286 TEKT1Q969V4 418 aa12.83□□□□□ -0.36
YBX3-203ENST00000366286 BEGAINQ9BUH8 593 aa12.83□□□□□ -0.36
YBX3-203ENST00000366286 GNL3LQ9NVN8 582 aaKnown RBP12.83□□□□□ -0.36
YBX3-203ENST00000366286 FZD1Q9UP38 647 aa12.83□□□□□ -0.36
YBX3-203ENST00000366286 AKAP2Q9Y2D5 859 aa12.83□□□□□ -0.36
YBX3-203ENST00000366286 SUGT1Q9Y2Z0 365 aa12.83□□□□□ -0.36
YBX3-203ENST00000366286 SEMA3EO15041 775 aa12.82□□□□□ -0.36
YBX3-203ENST00000366286 PRDX5P30044 214 aa12.82□□□□□ -0.36
YBX3-203ENST00000366286 G3BP1Q13283 466 aaKnown RBP eCLIP12.82□□□□□ -0.36
YBX3-203ENST00000366286 TNFAIP1Q13829 316 aa12.82□□□□□ -0.36
YBX3-203ENST00000366286 SSH3Q8TE77 659 aa12.82□□□□□ -0.36
YBX3-203ENST00000366286 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
YBX3-203ENST00000366286 PRDM10Q9NQV6 1147 aa12.82□□□□□ -0.36
YBX3-203ENST00000366286 TSKSQ9UJT2 592 aa12.82□□□□□ -0.36
YBX3-203ENST00000366286 RCAN3Q9UKA8 241 aa12.82□□□□□ -0.36
YBX3-203ENST00000366286 DENND2AQ9ULE3 1009 aa12.82□□□□□ -0.36
YBX3-203ENST00000366286 SALL1Q9NSC2 1324 aa12.82□□□□□ -0.36
YBX3-203ENST00000366286 CDK5RAP2Q96SN8 1893 aa12.81□□□□□ -0.36
YBX3-203ENST00000366286 TCP10L2B9ZVM9 353 aa12.81□□□□□ -0.36
YBX3-203ENST00000366286 ATP8B2P98198 1209 aa12.81□□□□□ -0.36
YBX3-203ENST00000366286 KIF23Q02241 960 aaPredicted RBP12.81□□□□□ -0.36
YBX3-203ENST00000366286 RASGRF1Q13972 1273 aa12.81□□□□□ -0.36
YBX3-203ENST00000366286 RASA3Q14644 834 aa12.81□□□□□ -0.36
YBX3-203ENST00000366286 IFFO2Q5TF58 517 aa12.81□□□□□ -0.36
YBX3-203ENST00000366286 ARMC9Q7Z3E5 817 aa12.81□□□□□ -0.36
YBX3-203ENST00000366286 ZDHHC15Q96MV8 337 aa12.81□□□□□ -0.36
YBX3-203ENST00000366286 ANGEL1Q9UNK9 670 aaKnown RBP12.81□□□□□ -0.36
YBX3-203ENST00000366286 ZBTB22O15209 634 aa12.8□□□□□ -0.36
YBX3-203ENST00000366286 MS4A1P11836 297 aa12.8□□□□□ -0.36
YBX3-203ENST00000366286 CACNB3P54284 484 aa12.8□□□□□ -0.36
YBX3-203ENST00000366286 MVPQ14764 893 aaKnown RBP12.8□□□□□ -0.36
YBX3-203ENST00000366286 NBPF12Q5TAG4 269 aaPredicted RBP12.8□□□□□ -0.36
YBX3-203ENST00000366286 APOBEC3HQ6NTF7 200 aaKnown RBP12.8□□□□□ -0.36
YBX3-203ENST00000366286 CEP85Q6P2H3 762 aa12.8□□□□□ -0.36
YBX3-203ENST00000366286 HHIPL2Q6UWX4 724 aa12.8□□□□□ -0.36
YBX3-203ENST00000366286 CDAN1Q8IWY9 1227 aa12.8□□□□□ -0.36
YBX3-203ENST00000366286 TNS4Q8IZW8 715 aa12.8□□□□□ -0.36
YBX3-203ENST00000366286 NEUROD6Q96NK8 337 aa12.8□□□□□ -0.36
YBX3-203ENST00000366286 PDS5AQ29RF7 1337 aaKnown RBP12.8□□□□□ -0.36
YBX3-203ENST00000366286 FOCADQ5VW36 1801 aa12.79□□□□□ -0.36
YBX3-203ENST00000366286 CA12O43570 354 aa12.79□□□□□ -0.36
YBX3-203ENST00000366286 LDHBP07195 334 aaKnown RBP12.79□□□□□ -0.36
YBX3-203ENST00000366286 OS9Q13438 667 aaPredicted RBP12.79□□□□□ -0.36
YBX3-203ENST00000366286 DIXDC1Q155Q3 683 aa12.79□□□□□ -0.36
YBX3-203ENST00000366286 MAP3K11Q16584 847 aa12.79□□□□□ -0.36
YBX3-203ENST00000366286 LDLRAD1Q5T700 205 aa12.79□□□□□ -0.36
YBX3-203ENST00000366286 TEPSINQ96N21 525 aa12.79□□□□□ -0.36
YBX3-203ENST00000366286 MRIQ9BWK5 157 aa12.79□□□□□ -0.36
YBX3-203ENST00000366286 TMEM39BQ9GZU3 492 aa12.79□□□□□ -0.36
YBX3-203ENST00000366286 TMOD2Q9NZR1 351 aa12.79□□□□□ -0.36
YBX3-203ENST00000366286 DAGLAQ9Y4D2 1042 aa12.79□□□□□ -0.36
YBX3-203ENST00000366286 PPP1R12BO60237 982 aaPredicted RBP12.78□□□□□ -0.36
YBX3-203ENST00000366286 SURF6O75683 361 aaKnown RBP12.78□□□□□ -0.36
YBX3-203ENST00000366286 ARID4AP29374 1257 aaPredicted RBP12.78□□□□□ -0.36
YBX3-203ENST00000366286 TNNI2P48788 182 aa12.78□□□□□ -0.36
YBX3-203ENST00000366286 MKRN3Q13064 507 aaKnown RBP12.78□□□□□ -0.36
YBX3-203ENST00000366286 SUPT20HL1Q3ZLR7 823 aa12.78□□□□□ -0.36
YBX3-203ENST00000366286 TNNI3KQ59H18 835 aa12.78□□□□□ -0.36
YBX3-203ENST00000366286 PI16Q6UXB8 463 aa12.78□□□□□ -0.36
YBX3-203ENST00000366286 ZGPATQ8N5A5 531 aaKnown RBP12.78□□□□□ -0.36
YBX3-203ENST00000366286 CSRNP1Q96S65 589 aa12.78□□□□□ -0.36
YBX3-203ENST00000366286 COG6Q9Y2V7 657 aa12.78□□□□□ -0.36
YBX3-203ENST00000366286 FPGT-TNNI3KV9GXZ4 949 aa12.78□□□□□ -0.36
YBX3-203ENST00000366286 RPAP1Q9BWH6 1393 aaPredicted RBP12.78□□□□□ -0.36
YBX3-203ENST00000366286 IREB2P48200 963 aaKnown RBP12.77□□□□□ -0.37
YBX3-203ENST00000366286 GORABQ5T7V8 394 aa12.77□□□□□ -0.37
YBX3-203ENST00000366286 DZIP1Q86YF9 867 aaKnown RBP12.77□□□□□ -0.37
YBX3-203ENST00000366286 CLMNQ96JQ2 1002 aa12.77□□□□□ -0.37
YBX3-203ENST00000366286 GPR108Q9NPR9 543 aa12.77□□□□□ -0.37
YBX3-203ENST00000366286 SAGE1Q9NXZ1 904 aa12.77□□□□□ -0.37
YBX3-203ENST00000366286 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.77□□□□□ -0.37
YBX3-203ENST00000366286 ABCF2Q9UG63 623 aa12.77□□□□□ -0.37
YBX3-203ENST00000366286 NOP58Q9Y2X3 529 aaKnown RBP12.77□□□□□ -0.37
YBX3-203ENST00000366286 USP2O75604 605 aaPredicted RBP12.76□□□□□ -0.37
YBX3-203ENST00000366286 MCAMP43121 646 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms