RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 FAM160A1Q05DH4 1040 aa12.35□□□□□ -0.43
SMC3-201ENST00000361804 ZCRB1Q8TBF4 217 aaKnown RBP12.35□□□□□ -0.43
SMC3-201ENST00000361804 ISCA1Q9BUE6 129 aa12.35□□□□□ -0.43
SMC3-201ENST00000361804 ELF2Q15723 593 aa12.35□□□□□ -0.43
SMC3-201ENST00000361804 ZMYM1Q5SVZ6 1142 aa12.35□□□□□ -0.43
SMC3-201ENST00000361804 SENP2Q9HC62 589 aa12.35□□□□□ -0.43
SMC3-201ENST00000361804 SCN7AQ01118 1682 aa12.35□□□□□ -0.43
SMC3-201ENST00000361804 ERVV-2B6SEH9 535 aa12.35□□□□□ -0.43
SMC3-201ENST00000361804 HLFQ16534 295 aa12.35□□□□□ -0.43
SMC3-201ENST00000361804 PUS7LQ9H0K6 701 aaKnown RBP12.35□□□□□ -0.43
SMC3-201ENST00000361804 IFNKQ9P0W0 207 aa12.35□□□□□ -0.43
SMC3-201ENST00000361804 CTNNA3Q9UI47 895 aa12.35□□□□□ -0.43
SMC3-201ENST00000361804 COL24A1Q17RW2 1714 aa12.35□□□□□ -0.43
SMC3-201ENST00000361804 KLF18A0A0U1RQI7 1052 aa12.35□□□□□ -0.43
SMC3-201ENST00000361804 ATP1A3P13637 1013 aa12.35□□□□□ -0.43
SMC3-201ENST00000361804 SF3A1Q15459 793 aaKnown RBP12.35□□□□□ -0.43
SMC3-201ENST00000361804 FMR1NBQ8N0W7 255 aaPredicted RBP12.35□□□□□ -0.43
SMC3-201ENST00000361804 XPO4Q9C0E2 1151 aaKnown RBP12.35□□□□□ -0.43
SMC3-201ENST00000361804 SALL1Q9NSC2 1324 aa12.34□□□□□ -0.43
SMC3-201ENST00000361804 LMOD1P29536 600 aaPredicted RBP12.34□□□□□ -0.43
SMC3-201ENST00000361804 TMC6Q7Z403 805 aa12.34□□□□□ -0.43
SMC3-201ENST00000361804 SH3TC1Q8TE82 1336 aa12.34□□□□□ -0.43
SMC3-201ENST00000361804 GOLGA8BA8MQT2 603 aa12.34□□□□□ -0.43
SMC3-201ENST00000361804 STK38Q15208 465 aa12.34□□□□□ -0.43
SMC3-201ENST00000361804 PTPN14Q15678 1187 aa12.34□□□□□ -0.43
SMC3-201ENST00000361804 GORABQ5T7V8 394 aa12.34□□□□□ -0.43
SMC3-201ENST00000361804 NAA16Q6N069 864 aaPredicted RBP12.34□□□□□ -0.43
SMC3-201ENST00000361804 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.34□□□□□ -0.43
SMC3-201ENST00000361804 TMX1Q9H3N1 280 aa12.34□□□□□ -0.43
SMC3-201ENST00000361804 KMT5BQ4FZB7 885 aa12.34□□□□□ -0.43
SMC3-201ENST00000361804 MYL10Q9BUA6 226 aa12.34□□□□□ -0.43
SMC3-201ENST00000361804 MROH7-TTC4A0A0A0MT08 1334 aa12.33□□□□□ -0.43
SMC3-201ENST00000361804 NEDD4P46934 1319 aa12.33□□□□□ -0.43
SMC3-201ENST00000361804 MRPS27Q92552 414 aaKnown RBP12.33□□□□□ -0.44
SMC3-201ENST00000361804 UBN2Q6ZU65 1347 aa12.33□□□□□ -0.44
SMC3-201ENST00000361804 RNF113AO15541 343 aaKnown RBP12.33□□□□□ -0.44
SMC3-201ENST00000361804 FGAP02671 866 aa12.33□□□□□ -0.44
SMC3-201ENST00000361804 SPECC1Q5M775 1068 aa12.33□□□□□ -0.44
SMC3-201ENST00000361804 ARMCX5Q6P1M9 558 aa12.33□□□□□ -0.44
SMC3-201ENST00000361804 VGLL2Q8N8G2 317 aa12.33□□□□□ -0.44
SMC3-201ENST00000361804 ZAP70P43403 619 aa12.33□□□□□ -0.44
SMC3-201ENST00000361804 ANTXR2P58335 489 aa12.33□□□□□ -0.44
SMC3-201ENST00000361804 PHKBQ93100 1093 aa12.33□□□□□ -0.44
SMC3-201ENST00000361804 FAM89AQ96GI7 184 aa12.33□□□□□ -0.44
SMC3-201ENST00000361804 ORC3Q9UBD5 711 aaPredicted RBP12.33□□□□□ -0.44
SMC3-201ENST00000361804 HPS5Q9UPZ3 1129 aa12.33□□□□□ -0.44
SMC3-201ENST00000361804 PCNTO95613 3336 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 PRC1O43663 620 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 WDHD1O75717 1129 aaPredicted RBP12.32□□□□□ -0.44
SMC3-201ENST00000361804 IL2RBP14784 551 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 CEP57L1Q8IYX8 460 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 CCAR2Q8N163 923 aaKnown RBP12.32□□□□□ -0.44
SMC3-201ENST00000361804 LINC00301Q8NCQ3 95 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 MRFAP1L1Q96HT8 127 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 C8orf76Q96K31 380 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 ANO10Q9NW15 660 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 E4F1Q66K89 784 aaPredicted RBP12.32□□□□□ -0.44
SMC3-201ENST00000361804 DPF2Q92785 391 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 CACNA1SQ13698 1873 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 FBXO38Q6PIJ6 1188 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 SARM1Q6SZW1 724 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 NYAP1Q6ZVC0 841 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 CLIC6Q96NY7 704 aa12.32□□□□□ -0.44
SMC3-201ENST00000361804 SYT10Q6XYQ8 523 aa12.31□□□□□ -0.44
SMC3-201ENST00000361804 ZNF396Q96N95 335 aaPredicted RBP12.31□□□□□ -0.44
SMC3-201ENST00000361804 LLPHQ9BRT6 129 aaKnown RBP12.31□□□□□ -0.44
SMC3-201ENST00000361804 DSCC1Q9BVC3 393 aa12.31□□□□□ -0.44
SMC3-201ENST00000361804 CWC25Q9NXE8 425 aaPredicted RBP12.31□□□□□ -0.44
SMC3-201ENST00000361804 LY75O60449 1722 aa12.31□□□□□ -0.44
SMC3-201ENST00000361804 EYA2O00167 538 aa12.31□□□□□ -0.44
SMC3-201ENST00000361804 NBPF3Q9H094 633 aa12.31□□□□□ -0.44
SMC3-201ENST00000361804 PRDM11Q9NQV5 511 aa12.31□□□□□ -0.44
SMC3-201ENST00000361804 HELLSQ9NRZ9 838 aa12.31□□□□□ -0.44
SMC3-201ENST00000361804 SNAP23O00161 211 aa12.31□□□□□ -0.44
SMC3-201ENST00000361804 FAM177A1Q8N128 213 aaPredicted RBP12.31□□□□□ -0.44
SMC3-201ENST00000361804 AGXT2Q9BYV1 514 aa12.31□□□□□ -0.44
SMC3-201ENST00000361804 TACC3Q9Y6A5 838 aa12.31□□□□□ -0.44
SMC3-201ENST00000361804 TNRC6CQ9HCJ0 1690 aaKnown RBP12.31□□□□□ -0.44
SMC3-201ENST00000361804 THSD7AQ9UPZ6 1657 aa12.31□□□□□ -0.44
SMC3-201ENST00000361804 XAGE2Q96GT9 111 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 KIAA1468Q9P260 1216 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 SRCAPQ6ZRS2 3230 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 BTAF1O14981 1849 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 ZNF202O95125 648 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 ERCC6LQ2NKX8 1250 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 EPC1Q9H2F5 836 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 SPTLC2O15270 562 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 FOXN1O15353 648 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 CSF1RP07333 972 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 PFKFB1P16118 471 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 CDC25BP30305 580 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 RBM6P78332 1123 aaKnown RBP12.3□□□□□ -0.44
SMC3-201ENST00000361804 TTC39AQ5SRH9 613 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 TOM1L2Q6ZVM7 507 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 HMGB1P09429 215 aaKnown RBP12.3□□□□□ -0.44
SMC3-201ENST00000361804 MYSM1Q5VVJ2 828 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 PTF1AQ7RTS3 328 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 DNAJC10Q8IXB1 793 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 CCDC82Q8N4S0 544 aa12.3□□□□□ -0.44
SMC3-201ENST00000361804 CPLX1O14810 134 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms