RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 FAM193AP78312 1265 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 IFIT5Q13325 482 aaKnown RBP7.56□□□□□ -1.2
CSDE1-203ENST00000358528 TERF2Q15554 542 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 HSP90B2PQ58FF3 399 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 TRIM22Q8IYM9 498 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 LINC00301Q8NCQ3 95 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 LRRN4CLQ8ND94 238 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 SLC52A2Q9HAB3 445 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 AXIN2Q9Y2T1 843 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 SLC12A7Q9Y666 1083 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 MINDY4BA8MYZ0 360 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 ZBTB43O43298 467 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 CTDNEP1O95476 244 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 FGAP02671 866 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 CDC25BP30305 580 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 ETF1P62495 437 aaKnown RBP7.56□□□□□ -1.2
CSDE1-203ENST00000358528 ARMCX5Q6P1M9 558 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 OSBP2Q969R2 916 aa7.56□□□□□ -1.2
CSDE1-203ENST00000358528 ZCCHC17Q9NP64 241 aaKnown RBP7.56□□□□□ -1.2
CSDE1-203ENST00000358528 IQSEC3Q9UPP2 1182 aaPredicted RBP7.56□□□□□ -1.2
CSDE1-203ENST00000358528 ZNF609O15014 1411 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 TMEM232C9JQI7 657 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 COBLO75128 1261 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 GYS2P54840 703 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 EVA1CP58658 441 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 VPS37DQ86XT2 251 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 BAG1Q99933 345 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-203ENST00000358528 NAPBQ9H115 298 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 ARFGAP3Q9NP61 516 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 EYA2O00167 538 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 GPAA1O43292 621 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 RHOXF2BP0C7M4 288 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 SSRP1Q08945 709 aaKnown RBP7.55□□□□□ -1.2
CSDE1-203ENST00000358528 E4F1Q66K89 784 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-203ENST00000358528 KRT40Q6A162 431 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 FMR1NBQ8N0W7 255 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-203ENST00000358528 FBXO18Q8NFZ0 1043 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 STAMQ92783 540 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 SMARCE1Q969G3 411 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 XAGE2Q96GT9 111 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 RHOXF2Q9BQY4 288 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 KCNJ14Q9UNX9 436 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 ITSN1Q15811 1721 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 hCG_1642624A0A1W2PR95 340 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 ATF3P18847 181 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 LONRF3Q496Y0 759 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 FILIP1LQ4L180 1135 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 SARM1Q6SZW1 724 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 DPF2Q92785 391 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 DHX58Q96C10 678 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 DSCC1Q9BVC3 393 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 RTEL1Q9NZ71 1219 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 IMPACTQ9P2X3 320 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 NFE2L3Q9Y4A8 694 aa7.55□□□□□ -1.2
CSDE1-203ENST00000358528 POLR2DO15514 142 aaKnown RBP7.54□□□□□ -1.2
CSDE1-203ENST00000358528 TSR1Q2NL82 804 aaKnown RBP7.54□□□□□ -1.2
CSDE1-203ENST00000358528 JAKMIP3Q5VZ66 844 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 BRAPQ7Z569 592 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 GRAMD1CQ8IYS0 662 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 PLCD3Q8N3E9 789 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 ZNF274Q96GC6 653 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-203ENST00000358528 AK7Q96M32 723 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 KCNH3Q9ULD8 1083 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 AKAP2Q9Y2D5 859 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 MED23Q9ULK4 1368 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 PPP2R3AQ06190 1150 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 SART3Q15020 963 aaKnown RBP7.54□□□□□ -1.2
CSDE1-203ENST00000358528 LEKR1Q6ZMV7 388 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 KIF6Q6ZMV9 814 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 INCENPQ9NQS7 918 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 ABCF2Q9UG63 623 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 KIF5CO60282 957 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 OAS2P29728 719 aaKnown RBP7.54□□□□□ -1.2
CSDE1-203ENST00000358528 SLC4A8Q2Y0W8 1093 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 ZMYM1Q5SVZ6 1142 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 ATL3Q6DD88 541 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 KRBA2Q6ZNG9 492 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 SMARCC2Q8TAQ2 1214 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 KCNB2Q92953 911 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 PCDHA5Q9Y5H7 936 aa7.54□□□□□ -1.2
CSDE1-203ENST00000358528 PLEKHG1Q9ULL1 1385 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 YEATS4O95619 227 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 C10orf67Q8IYJ2 551 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 PUS7LQ9H0K6 701 aaKnown RBP7.53□□□□□ -1.2
CSDE1-203ENST00000358528 RAI14Q9P0K7 980 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 MORC2Q9Y6X9 1032 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-203ENST00000358528 KIF28PB7ZC32 967 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 PNMA6AP0CW24 399 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-203ENST00000358528 CCT6AP40227 531 aaKnown RBP7.53□□□□□ -1.2
CSDE1-203ENST00000358528 RBM6P78332 1123 aaKnown RBP7.53□□□□□ -1.2
CSDE1-203ENST00000358528 SYCP1Q15431 976 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 ZNF569Q5MCW4 686 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 ANKRD20A12PQ8NF67 263 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 PLBD2Q8NHP8 589 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 CAGE1Q8TC20 777 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 VPS18Q9P253 973 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 DACH1Q9UI36 760 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 PPP2R2CQ9Y2T4 447 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 FOXN1O15353 648 aa7.53□□□□□ -1.2
CSDE1-203ENST00000358528 SLFN14P0C7P3 912 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms