RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 TSPY26PQ9H489 355 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 ADGRG1Q9Y653 693 aa4.76□□□□□ -1.65
CNGA1-201ENST00000358519 TUBGCP6Q96RT7 1819 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 DUOX1Q9NRD9 1551 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 BCORQ6W2J9 1755 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 ARFGEF2Q9Y6D5 1785 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 ITGB4P16144 1822 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 TATP17735 454 aaPredicted RBP4.75□□□□□ -1.65
CNGA1-201ENST00000358519 HNRNPH2P55795 449 aaKnown RBP4.75□□□□□ -1.65
CNGA1-201ENST00000358519 SYCP1Q15431 976 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 BRICD5Q6PL45 260 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.75□□□□□ -1.65
CNGA1-201ENST00000358519 KIAA1524Q8TCG1 905 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 DCAF5Q96JK2 942 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 USP25Q9UHP3 1055 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 RSPH14Q9UHP6 348 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 COL5A3P25940 1745 aaPredicted RBP4.75□□□□□ -1.65
CNGA1-201ENST00000358519 HMMRO75330 724 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 ALDH1L1O75891 902 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 ADCY5O95622 1261 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 HSP90B1P14625 803 aaKnown RBP4.75□□□□□ -1.65
CNGA1-201ENST00000358519 RAD51AP2Q09MP3 1159 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 FSTL1Q12841 308 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 NAA30Q147X3 362 aaPredicted RBP4.75□□□□□ -1.65
CNGA1-201ENST00000358519 HSP90AB4PQ58FF6 505 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 C1orf141Q5JVX7 400 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 CNPY4Q8N129 248 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 CHAMP1Q96JM3 812 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 BCL2L13Q9BXK5 485 aa4.75□□□□□ -1.65
CNGA1-201ENST00000358519 PPFIA3O75145 1194 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 VAMP4O75379 141 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 GNAI3P08754 354 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 FAM193AP78312 1265 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 SAFB2Q14151 953 aaKnown RBP eCLIP4.74□□□□□ -1.65
CNGA1-201ENST00000358519 AXDND1Q5T1B0 1012 aaPredicted RBP4.74□□□□□ -1.65
CNGA1-201ENST00000358519 ZNF385CQ66K41 422 aaPredicted RBP4.74□□□□□ -1.65
CNGA1-201ENST00000358519 IFNL2Q8IZJ0 200 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 PRDM9Q9NQV7 894 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 EMILIN1Q9Y6C2 1016 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 WASF2Q9Y6W5 498 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 RFX7Q2KHR2 1363 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 SBF2Q86WG5 1849 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 MBD3O95983 291 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 CYP2C19P33261 490 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 NOP2P46087 812 aaKnown RBP4.74□□□□□ -1.65
CNGA1-201ENST00000358519 UVSSAQ2YD98 709 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 SULT6B1Q6IMI4 303 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 STK31Q9BXU1 1019 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 HYPKQ9NX55 129 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 PYCARDQ9ULZ3 195 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 ZDHHC9Q9Y397 364 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 CD2APQ9Y5K6 639 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 LY75O60449 1722 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 WDR90Q96KV7 1748 aa4.74□□□□□ -1.65
CNGA1-201ENST00000358519 TJP1Q07157 1748 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 TOGARAM1Q9Y4F4 1720 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 EXOC5O00471 708 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 DHX16O60231 1041 aaKnown RBP4.73□□□□□ -1.65
CNGA1-201ENST00000358519 ARHGEF15O94989 841 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 DDX58O95786 925 aaKnown RBP4.73□□□□□ -1.65
CNGA1-201ENST00000358519 HSPA1AP0DMV8 641 aaKnown RBP4.73□□□□□ -1.65
CNGA1-201ENST00000358519 HSPA1BP0DMV9 641 aaKnown RBP4.73□□□□□ -1.65
CNGA1-201ENST00000358519 ATP6V1AP38606 617 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 GTF2A1P52655 376 aaPredicted RBP4.73□□□□□ -1.65
CNGA1-201ENST00000358519 TWISTNBQ3B726 338 aaPredicted RBP4.73□□□□□ -1.65
CNGA1-201ENST00000358519 TOM1L2Q6ZVM7 507 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 FAM184AQ8NB25 1140 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 RAPGEF4Q8WZA2 1011 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 ZNF622Q969S3 477 aaKnown RBP eCLIP4.73□□□□□ -1.65
CNGA1-201ENST00000358519 AK7Q96M32 723 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 CNTNAP3BQ96NU0 1288 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 CNTNAP3Q9BZ76 1288 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 SRCIN1Q9C0H9 1055 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 TMX1Q9H3N1 280 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 CWC22Q9HCG8 908 aaKnown RBP4.73□□□□□ -1.65
CNGA1-201ENST00000358519 ST7Q9NRC1 585 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 FAM53CQ9NYF3 392 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 TFCP2L1Q9NZI6 479 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 AFDNP55196 1824 aaKnown RBP4.73□□□□□ -1.65
CNGA1-201ENST00000358519 UTYO14607 1347 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 DDX60Q8IY21 1712 aaKnown RBP4.73□□□□□ -1.65
CNGA1-201ENST00000358519 ARAP2Q8WZ64 1704 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 KCPQ6ZWJ8 1503 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 MMP16P51512 607 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 SLC27A3Q5K4L6 730 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 ANKRD24Q8TF21 1146 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 RASSF4Q9H2L5 321 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 KCNF1Q9H3M0 494 aa4.73□□□□□ -1.65
CNGA1-201ENST00000358519 CARMIL3Q8ND23 1372 aa4.72□□□□□ -1.65
CNGA1-201ENST00000358519 RIC1Q4ADV7 1423 aa4.72□□□□□ -1.65
CNGA1-201ENST00000358519 SCN7AQ01118 1682 aa4.72□□□□□ -1.65
CNGA1-201ENST00000358519 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
CNGA1-201ENST00000358519 SMTNL1A8MU46 457 aa4.72□□□□□ -1.65
CNGA1-201ENST00000358519 RAB11FIP3O75154 756 aa4.72□□□□□ -1.65
CNGA1-201ENST00000358519 FECHP22830 423 aa4.72□□□□□ -1.65
CNGA1-201ENST00000358519 SKOR1P84550 965 aa4.72□□□□□ -1.65
CNGA1-201ENST00000358519 BMP2KLQ5H9B9 411 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms