RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
CAPN3-204ENST00000356316 SPRYD7Q5W111 196 aa13.34□□□□□ -0.27
CAPN3-204ENST00000356316 FBXO33Q7Z6M2 555 aa13.34□□□□□ -0.27
CAPN3-204ENST00000356316 DZIP1LQ8IYY4 767 aaKnown RBP13.34□□□□□ -0.27
CAPN3-204ENST00000356316 ANKRD44Q8N8A2 993 aa13.34□□□□□ -0.27
CAPN3-204ENST00000356316 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
CAPN3-204ENST00000356316 TDRD3Q9H7E2 651 aaKnown RBP13.34□□□□□ -0.27
CAPN3-204ENST00000356316 FZD1Q9UP38 647 aa13.34□□□□□ -0.27
CAPN3-204ENST00000356316 IQSEC3Q9UPP2 1182 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-204ENST00000356316 CT47B1P0C2W7 299 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-204ENST00000356316 ZBTB48P10074 688 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-204ENST00000356316 PKN2Q16513 984 aaKnown RBP13.33□□□□□ -0.28
CAPN3-204ENST00000356316 MAP3K11Q16584 847 aa13.33□□□□□ -0.28
CAPN3-204ENST00000356316 NBPF12Q5TAG4 269 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-204ENST00000356316 OTUD7BQ6GQQ9 843 aa13.33□□□□□ -0.28
CAPN3-204ENST00000356316 KLHDC4Q8TBB5 520 aa13.33□□□□□ -0.28
CAPN3-204ENST00000356316 ZNF70Q9UC06 446 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-204ENST00000356316 GPR25O00155 361 aa13.32□□□□□ -0.28
CAPN3-204ENST00000356316 USP2O75604 605 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-204ENST00000356316 UBTFL1P0CB47 393 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-204ENST00000356316 CRKP46108 304 aa13.32□□□□□ -0.28
CAPN3-204ENST00000356316 PUM3Q15397 648 aaKnown RBP13.32□□□□□ -0.28
CAPN3-204ENST00000356316 ANKRD13AQ8IZ07 590 aa13.32□□□□□ -0.28
CAPN3-204ENST00000356316 ZNF296Q8WUU4 475 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-204ENST00000356316 TEKT1Q969V4 418 aa13.32□□□□□ -0.28
CAPN3-204ENST00000356316 TCP10L2B9ZVM9 353 aa13.31□□□□□ -0.28
CAPN3-204ENST00000356316 EYA2O00167 538 aa13.31□□□□□ -0.28
CAPN3-204ENST00000356316 SLC5A1P13866 664 aa13.31□□□□□ -0.28
CAPN3-204ENST00000356316 BCAMP50895 628 aa13.31□□□□□ -0.28
CAPN3-204ENST00000356316 HDLBPQ00341 1268 aaKnown RBP13.31□□□□□ -0.28
CAPN3-204ENST00000356316 NOM1Q5C9Z4 860 aaKnown RBP13.31□□□□□ -0.28
CAPN3-204ENST00000356316 WNK4Q96J92 1243 aa13.31□□□□□ -0.28
CAPN3-204ENST00000356316 API5Q9BZZ5 524 aaKnown RBP13.31□□□□□ -0.28
CAPN3-204ENST00000356316 TMOD2Q9NZR1 351 aa13.31□□□□□ -0.28
CAPN3-204ENST00000356316 NOB1Q9ULX3 412 aaKnown RBP13.31□□□□□ -0.28
CAPN3-204ENST00000356316 CCER2I3L3R5 266 aa13.3□□□□□ -0.28
CAPN3-204ENST00000356316 FKTNO75072 461 aa13.3□□□□□ -0.28
CAPN3-204ENST00000356316 IFNL1Q8IU54 200 aa13.3□□□□□ -0.28
CAPN3-204ENST00000356316 TRMT2AQ8IZ69 625 aaKnown RBP13.3□□□□□ -0.28
CAPN3-204ENST00000356316 VGLL2Q8N8G2 317 aa13.3□□□□□ -0.28
CAPN3-204ENST00000356316 LPIN2Q92539 896 aa13.3□□□□□ -0.28
CAPN3-204ENST00000356316 CLMNQ96JQ2 1002 aa13.3□□□□□ -0.28
CAPN3-204ENST00000356316 MRIQ9BWK5 157 aa13.3□□□□□ -0.28
CAPN3-204ENST00000356316 GNL3LQ9NVN8 582 aaKnown RBP13.3□□□□□ -0.28
CAPN3-204ENST00000356316 SUGT1Q9Y2Z0 365 aa13.3□□□□□ -0.28
CAPN3-204ENST00000356316 MAST3O60307 1309 aa13.3□□□□□ -0.28
CAPN3-204ENST00000356316 WDR66Q8TBY9 1149 aa13.29□□□□□ -0.28
CAPN3-204ENST00000356316 HOOK2Q96ED9 719 aa13.29□□□□□ -0.28
CAPN3-204ENST00000356316 CFHR5Q9BXR6 569 aa13.29□□□□□ -0.28
CAPN3-204ENST00000356316 CEP126Q9P2H0 1117 aa13.29□□□□□ -0.28
CAPN3-204ENST00000356316 FBXO3Q9UK99 471 aa13.29□□□□□ -0.28
CAPN3-204ENST00000356316 AOX1Q06278 1338 aa13.29□□□□□ -0.28
CAPN3-204ENST00000356316 KIF16BQ96L93 1317 aa13.29□□□□□ -0.28
CAPN3-204ENST00000356316 MAP3K9P80192 1104 aa13.28□□□□□ -0.28
CAPN3-204ENST00000356316 ZDHHC15Q96MV8 337 aa13.28□□□□□ -0.28
CAPN3-204ENST00000356316 TMEM39BQ9GZU3 492 aa13.28□□□□□ -0.28
CAPN3-204ENST00000356316 SIL1Q9H173 461 aa13.28□□□□□ -0.28
CAPN3-204ENST00000356316 ELP3Q9H9T3 547 aa13.28□□□□□ -0.28
CAPN3-204ENST00000356316 HPS5Q9UPZ3 1129 aa13.28□□□□□ -0.28
CAPN3-204ENST00000356316 CSADQ9Y600 493 aa13.28□□□□□ -0.28
CAPN3-204ENST00000356316 ARAP2Q8WZ64 1704 aa13.27□□□□□ -0.28
CAPN3-204ENST00000356316 CIAO1O76071 339 aa13.27□□□□□ -0.29
CAPN3-204ENST00000356316 FGFR2P21802 821 aa13.27□□□□□ -0.29
CAPN3-204ENST00000356316 RFX5P48382 616 aaPredicted RBP13.27□□□□□ -0.29
CAPN3-204ENST00000356316 SOX10P56693 466 aa13.27□□□□□ -0.29
CAPN3-204ENST00000356316 GRIK5Q16478 980 aa13.27□□□□□ -0.29
CAPN3-204ENST00000356316 OPTNQ96CV9 577 aa13.27□□□□□ -0.29
CAPN3-204ENST00000356316 TNRC18O15417 2968 aaPredicted RBP13.27□□□□□ -0.29
CAPN3-204ENST00000356316 SSC5DA1L4H1 1573 aa13.27□□□□□ -0.29
CAPN3-204ENST00000356316 IPO8O15397 1037 aaKnown RBP13.26□□□□□ -0.29
CAPN3-204ENST00000356316 WDHD1O75717 1129 aaPredicted RBP13.26□□□□□ -0.29
CAPN3-204ENST00000356316 IL15P40933 162 aaPredicted RBP13.26□□□□□ -0.29
CAPN3-204ENST00000356316 ATP2B3Q16720 1220 aa13.26□□□□□ -0.29
CAPN3-204ENST00000356316 FBXO46Q6PJ61 603 aaPredicted RBP13.26□□□□□ -0.29
CAPN3-204ENST00000356316 HHIPL2Q6UWX4 724 aa13.26□□□□□ -0.29
CAPN3-204ENST00000356316 FAM83AQ86UY5 434 aa13.26□□□□□ -0.29
CAPN3-204ENST00000356316 TEPSINQ96N21 525 aa13.26□□□□□ -0.29
CAPN3-204ENST00000356316 MYH13Q9UKX3 1938 aa13.26□□□□□ -0.29
CAPN3-204ENST00000356316 LRRFIP2Q9Y608 721 aaKnown RBP13.26□□□□□ -0.29
CAPN3-204ENST00000356316 IGF2BP3O00425 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
CAPN3-204ENST00000356316 GTF2A2P52657 109 aa13.25□□□□□ -0.29
CAPN3-204ENST00000356316 CACNB3P54284 484 aa13.25□□□□□ -0.29
CAPN3-204ENST00000356316 FKBP1CQ5VVH2 108 aa13.25□□□□□ -0.29
CAPN3-204ENST00000356316 ATG9AQ7Z3C6 839 aa13.25□□□□□ -0.29
CAPN3-204ENST00000356316 ARHGAP45Q92619 1136 aa13.25□□□□□ -0.29
CAPN3-204ENST00000356316 R3HDMLQ9H3Y0 253 aa13.25□□□□□ -0.29
CAPN3-204ENST00000356316 LDHBP07195 334 aaKnown RBP13.24□□□□□ -0.29
CAPN3-204ENST00000356316 GNAI3P08754 354 aa13.24□□□□□ -0.29
CAPN3-204ENST00000356316 RARSP54136 660 aaKnown RBP13.24□□□□□ -0.29
CAPN3-204ENST00000356316 ARHGEF6Q15052 776 aa13.24□□□□□ -0.29
CAPN3-204ENST00000356316 DCAF15Q66K64 600 aa13.24□□□□□ -0.29
CAPN3-204ENST00000356316 APOBEC3HQ6NTF7 200 aaKnown RBP13.24□□□□□ -0.29
CAPN3-204ENST00000356316 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.24□□□□□ -0.29
CAPN3-204ENST00000356316 ERO1AQ96HE7 468 aa13.24□□□□□ -0.29
CAPN3-204ENST00000356316 DENND2AQ9ULE3 1009 aa13.24□□□□□ -0.29
CAPN3-204ENST00000356316 TRIM17Q9Y577 477 aa13.24□□□□□ -0.29
CAPN3-204ENST00000356316 TESPA1A2RU30 521 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-204ENST00000356316 SEMA3EO15041 775 aa13.23□□□□□ -0.29
CAPN3-204ENST00000356316 GJA5P36382 358 aa13.23□□□□□ -0.29
CAPN3-204ENST00000356316 CRHR2Q13324 411 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms