RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 PPP2R3BQ9Y5P8 575 aa14.28□□□□□ -0.12
CDRT1-202ENST00000354433 TRPA1O75762 1119 aa14.27□□□□□ -0.12
CDRT1-202ENST00000354433 GNAI3P08754 354 aa14.27□□□□□ -0.12
CDRT1-202ENST00000354433 TRIM27P14373 513 aa14.27□□□□□ -0.12
CDRT1-202ENST00000354433 CRKP46108 304 aa14.27□□□□□ -0.12
CDRT1-202ENST00000354433 TNFAIP1Q13829 316 aa14.27□□□□□ -0.12
CDRT1-202ENST00000354433 ATF7IPQ6VMQ6 1270 aa14.27□□□□□ -0.12
CDRT1-202ENST00000354433 CEP126Q9P2H0 1117 aa14.27□□□□□ -0.12
CDRT1-202ENST00000354433 PA2G4Q9UQ80 394 aaKnown RBP14.27□□□□□ -0.12
CDRT1-202ENST00000354433 ARAP2Q8WZ64 1704 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 PPP1R12BO60237 982 aaPredicted RBP14.26□□□□□ -0.13
CDRT1-202ENST00000354433 CIAO1O76071 339 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 FGFR2P21802 821 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 ATP2B3Q16720 1220 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 INTS3Q68E01 1043 aaKnown RBP14.26□□□□□ -0.13
CDRT1-202ENST00000354433 DZIP1LQ8IYY4 767 aaKnown RBP14.26□□□□□ -0.13
CDRT1-202ENST00000354433 PANK1Q8TE04 598 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 TDRD3Q9H7E2 651 aaKnown RBP14.26□□□□□ -0.13
CDRT1-202ENST00000354433 SAGE1Q9NXZ1 904 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 FBXO3Q9UK99 471 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 AOX1Q06278 1338 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 SRGAP3O43295 1099 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 IL15P40933 162 aaPredicted RBP14.26□□□□□ -0.13
CDRT1-202ENST00000354433 RASA3Q14644 834 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 GRIK5Q16478 980 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 SUPT20HL1Q3ZLR7 823 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 SPDYE2Q495Y8 402 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 ATG9AQ7Z3C6 839 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
CDRT1-202ENST00000354433 TEKT1Q969V4 418 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 CSRNP1Q96S65 589 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 RNF186Q9NXI6 227 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 ZNF70Q9UC06 446 aaPredicted RBP14.26□□□□□ -0.13
CDRT1-202ENST00000354433 TNNQ9UQP3 1299 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 MAST3O60307 1309 aa14.26□□□□□ -0.13
CDRT1-202ENST00000354433 TCP10L2B9ZVM9 353 aa14.25□□□□□ -0.13
CDRT1-202ENST00000354433 TNNI2P48788 182 aa14.25□□□□□ -0.13
CDRT1-202ENST00000354433 FTSJ3Q8IY81 847 aaKnown RBP14.25□□□□□ -0.13
CDRT1-202ENST00000354433 TMOD2Q9NZR1 351 aa14.25□□□□□ -0.13
CDRT1-202ENST00000354433 SSC5DA1L4H1 1573 aa14.24□□□□□ -0.13
CDRT1-202ENST00000354433 MVPQ14764 893 aaKnown RBP14.24□□□□□ -0.13
CDRT1-202ENST00000354433 NBPF12Q5TAG4 269 aaPredicted RBP14.24□□□□□ -0.13
CDRT1-202ENST00000354433 CENPQQ7L2Z9 268 aaPredicted RBP14.24□□□□□ -0.13
CDRT1-202ENST00000354433 ABHD8Q96I13 439 aa14.24□□□□□ -0.13
CDRT1-202ENST00000354433 COPRSQ9NQ92 184 aa14.24□□□□□ -0.13
CDRT1-202ENST00000354433 GNL3LQ9NVN8 582 aaKnown RBP14.24□□□□□ -0.13
CDRT1-202ENST00000354433 COG6Q9Y2V7 657 aa14.24□□□□□ -0.13
CDRT1-202ENST00000354433 ECM29Q5VYK3 1845 aa14.24□□□□□ -0.13
CDRT1-202ENST00000354433 GNAI2P04899 355 aa14.23□□□□□ -0.13
CDRT1-202ENST00000354433 IREB2P48200 963 aaKnown RBP14.23□□□□□ -0.13
CDRT1-202ENST00000354433 SREBF2Q12772 1141 aa14.23□□□□□ -0.13
CDRT1-202ENST00000354433 WDR66Q8TBY9 1149 aa14.23□□□□□ -0.13
CDRT1-202ENST00000354433 RLBP1P12271 317 aa14.22□□□□□ -0.13
CDRT1-202ENST00000354433 CACNB3P54284 484 aa14.22□□□□□ -0.13
CDRT1-202ENST00000354433 SLC10A4Q96EP9 437 aa14.22□□□□□ -0.13
CDRT1-202ENST00000354433 DDX19BQ9UMR2 479 aa14.22□□□□□ -0.13
CDRT1-202ENST00000354433 SUGT1Q9Y2Z0 365 aa14.22□□□□□ -0.13
CDRT1-202ENST00000354433 HDLBPQ00341 1268 aaKnown RBP14.22□□□□□ -0.13
CDRT1-202ENST00000354433 DGKZQ13574 1117 aa14.22□□□□□ -0.13
CDRT1-202ENST00000354433 TMEM57Q8N5G2 664 aa14.22□□□□□ -0.13
CDRT1-202ENST00000354433 TMEM39BQ9GZU3 492 aa14.22□□□□□ -0.13
CDRT1-202ENST00000354433 CHMP4BQ9H444 224 aaKnown RBP14.22□□□□□ -0.13
CDRT1-202ENST00000354433 PHKA1P46020 1223 aa14.21□□□□□ -0.14
CDRT1-202ENST00000354433 MAP3K11Q16584 847 aa14.21□□□□□ -0.14
CDRT1-202ENST00000354433 LDLRAD1Q5T700 205 aa14.21□□□□□ -0.14
CDRT1-202ENST00000354433 CLMNQ96JQ2 1002 aa14.21□□□□□ -0.14
CDRT1-202ENST00000354433 MCOLN1Q9GZU1 580 aa14.21□□□□□ -0.14
CDRT1-202ENST00000354433 TSHZ2Q9NRE2 1034 aa14.21□□□□□ -0.14
CDRT1-202ENST00000354433 A0A1B0GUL7 405 aa14.2□□□□□ -0.14
CDRT1-202ENST00000354433 CCDC85CA6NKD9 419 aa14.2□□□□□ -0.14
CDRT1-202ENST00000354433 PRDX5P30044 214 aa14.2□□□□□ -0.14
CDRT1-202ENST00000354433 ADORA1P30542 326 aa14.2□□□□□ -0.14
CDRT1-202ENST00000354433 MTX1Q13505 466 aa14.2□□□□□ -0.14
CDRT1-202ENST00000354433 SPRYD7Q5W111 196 aa14.2□□□□□ -0.14
CDRT1-202ENST00000354433 ITPRIPQ8IWB1 547 aa14.2□□□□□ -0.14
CDRT1-202ENST00000354433 CDAN1Q8IWY9 1227 aa14.2□□□□□ -0.14
CDRT1-202ENST00000354433 ANKRD13AQ8IZ07 590 aa14.2□□□□□ -0.14
CDRT1-202ENST00000354433 ZDHHC15Q96MV8 337 aa14.2□□□□□ -0.14
CDRT1-202ENST00000354433 DENND2AQ9ULE3 1009 aa14.2□□□□□ -0.14
CDRT1-202ENST00000354433 TBC1D8O95759 1140 aa14.19□□□□□ -0.14
CDRT1-202ENST00000354433 LDHBP07195 334 aaKnown RBP14.19□□□□□ -0.14
CDRT1-202ENST00000354433 TFCP2Q12800 502 aa14.19□□□□□ -0.14
CDRT1-202ENST00000354433 DIXDC1Q155Q3 683 aa14.19□□□□□ -0.14
CDRT1-202ENST00000354433 CCDC102BQ68D86 513 aa14.19□□□□□ -0.14
CDRT1-202ENST00000354433 WNK4Q96J92 1243 aa14.19□□□□□ -0.14
CDRT1-202ENST00000354433 NEUROD6Q96NK8 337 aa14.19□□□□□ -0.14
CDRT1-202ENST00000354433 AKAP2Q9Y2D5 859 aa14.19□□□□□ -0.14
CDRT1-202ENST00000354433 SEMA3EO15041 775 aa14.18□□□□□ -0.14
CDRT1-202ENST00000354433 USP2O75604 605 aaPredicted RBP14.18□□□□□ -0.14
CDRT1-202ENST00000354433 ZBTB48P10074 688 aaPredicted RBP14.18□□□□□ -0.14
CDRT1-202ENST00000354433 TIMM10P62072 90 aa14.18□□□□□ -0.14
CDRT1-202ENST00000354433 G3BP1Q13283 466 aaKnown RBP eCLIP14.18□□□□□ -0.14
CDRT1-202ENST00000354433 HHIPL2Q6UWX4 724 aa14.18□□□□□ -0.14
CDRT1-202ENST00000354433 ZGPATQ8N5A5 531 aaKnown RBP14.18□□□□□ -0.14
CDRT1-202ENST00000354433 ELP3Q9H9T3 547 aa14.18□□□□□ -0.14
CDRT1-202ENST00000354433 AKAP11Q9UKA4 1901 aa14.18□□□□□ -0.14
CDRT1-202ENST00000354433 MYH13Q9UKX3 1938 aa14.18□□□□□ -0.14
CDRT1-202ENST00000354433 CASP8AP2Q9UKL3 1982 aa14.18□□□□□ -0.14
CDRT1-202ENST00000354433 PNMA6EA0A0J9YXQ4 647 aa14.17□□□□□ -0.14
CDRT1-202ENST00000354433 MANSC4A6NHS7 340 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms