RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 APPBP2Q92624 585 aa32.65■■■□□ 2.82
SSBP4-202ENST00000348495 HELLSQ9NRZ9 838 aa32.65■■■□□ 2.82
SSBP4-202ENST00000348495 SUGT1Q9Y2Z0 365 aa32.65■■■□□ 2.82
SSBP4-202ENST00000348495 RAD50Q92878 1312 aa32.65■■■□□ 2.82
SSBP4-202ENST00000348495 MECOMQ03112 1051 aa32.64■■■□□ 2.82
SSBP4-202ENST00000348495 TMED8Q6PL24 325 aaPredicted RBP32.64■■■□□ 2.82
SSBP4-202ENST00000348495 CCDC88AQ3V6T2 1871 aa32.63■■■□□ 2.81
SSBP4-202ENST00000348495 FBXW7Q969H0 707 aa32.63■■■□□ 2.81
SSBP4-202ENST00000348495 SEC62Q99442 399 aaKnown RBP32.63■■■□□ 2.81
SSBP4-202ENST00000348495 OSBP2Q969R2 916 aa32.63■■■□□ 2.81
SSBP4-202ENST00000348495 MXD3Q9BW11 206 aa32.63■■■□□ 2.81
SSBP4-202ENST00000348495 SBF1O95248 1867 aa32.62■■■□□ 2.81
SSBP4-202ENST00000348495 LMNB1P20700 586 aa32.62■■■□□ 2.81
SSBP4-202ENST00000348495 MCMDC2Q4G0Z9 681 aa32.62■■■□□ 2.81
SSBP4-202ENST00000348495 DICER1Q9UPY3 1922 aaKnown RBP32.6■■■□□ 2.81
SSBP4-202ENST00000348495 MAST3O60307 1309 aa32.6■■■□□ 2.81
SSBP4-202ENST00000348495 PUS7LQ9H0K6 701 aaKnown RBP32.6■■■□□ 2.81
SSBP4-202ENST00000348495 NAA16Q6N069 864 aaPredicted RBP32.6■■■□□ 2.81
SSBP4-202ENST00000348495 ADGRA1Q86SQ6 560 aa32.6■■■□□ 2.81
SSBP4-202ENST00000348495 DZIP1Q86YF9 867 aaKnown RBP32.6■■■□□ 2.81
SSBP4-202ENST00000348495 M0R2C6 588 aa32.59■■■□□ 2.81
SSBP4-202ENST00000348495 EIF5BO60841 1220 aaKnown RBP32.59■■■□□ 2.81
SSBP4-202ENST00000348495 RAD17O75943 681 aa32.59■■■□□ 2.81
SSBP4-202ENST00000348495 VIL1P09327 827 aaKnown RBP32.59■■■□□ 2.81
SSBP4-202ENST00000348495 ZNF589Q86UQ0 364 aaPredicted RBP32.59■■■□□ 2.81
SSBP4-202ENST00000348495 FZD9O00144 591 aa32.58■■■□□ 2.81
SSBP4-202ENST00000348495 CYP7A1P22680 504 aa32.58■■■□□ 2.81
SSBP4-202ENST00000348495 CXCL9Q07325 125 aa32.58■■■□□ 2.81
SSBP4-202ENST00000348495 GPR162Q16538 588 aa32.58■■■□□ 2.81
SSBP4-202ENST00000348495 PSMD14O00487 310 aa32.57■■■□□ 2.81
SSBP4-202ENST00000348495 MFAP1P55081 439 aaKnown RBP32.57■■■□□ 2.8
SSBP4-202ENST00000348495 REC8O95072 547 aa32.56■■■□□ 2.8
SSBP4-202ENST00000348495 RSBN1LQ6PCB5 846 aaPredicted RBP32.56■■■□□ 2.8
SSBP4-202ENST00000348495 CCDC171Q6TFL3 1326 aa32.55■■■□□ 2.8
SSBP4-202ENST00000348495 GSTO1P78417 241 aa32.55■■■□□ 2.8
SSBP4-202ENST00000348495 CCDC129Q6ZRS4 1044 aa32.55■■■□□ 2.8
SSBP4-202ENST00000348495 MYO3BQ8WXR4 1341 aa32.55■■■□□ 2.8
SSBP4-202ENST00000348495 GRIN3BO60391 1043 aa32.54■■■□□ 2.8
SSBP4-202ENST00000348495 DIXDC1Q155Q3 683 aa32.54■■■□□ 2.8
SSBP4-202ENST00000348495 GMLQ99445 158 aa32.54■■■□□ 2.8
SSBP4-202ENST00000348495 CIAPIN1Q6FI81 312 aa32.54■■■□□ 2.8
SSBP4-202ENST00000348495 FAM163AQ96GL9 167 aaPredicted RBP32.54■■■□□ 2.8
SSBP4-202ENST00000348495 LSG1Q9H089 658 aaKnown RBP32.54■■■□□ 2.8
SSBP4-202ENST00000348495 TTF2Q9UNY4 1162 aaKnown RBP32.54■■■□□ 2.8
SSBP4-202ENST00000348495 GPAA1O43292 621 aa32.52■■■□□ 2.8
SSBP4-202ENST00000348495 ANO2Q9NQ90 1003 aa32.52■■■□□ 2.8
SSBP4-202ENST00000348495 MYH2Q9UKX2 1941 aa32.52■■■□□ 2.8
SSBP4-202ENST00000348495 GAKO14976 1311 aa32.52■■■□□ 2.8
SSBP4-202ENST00000348495 LDHCP07864 332 aa32.51■■■□□ 2.8
SSBP4-202ENST00000348495 MIGA1Q8NAN2 632 aa32.51■■■□□ 2.8
SSBP4-202ENST00000348495 RIOK1Q9BRS2 568 aaKnown RBP32.51■■■□□ 2.8
SSBP4-202ENST00000348495 MROH7-TTC4A0A0A0MT08 1334 aa32.51■■■□□ 2.79
SSBP4-202ENST00000348495 F8W031 263 aaPredicted RBP32.51■■■□□ 2.79
SSBP4-202ENST00000348495 TNIP1Q15025 636 aa32.51■■■□□ 2.79
SSBP4-202ENST00000348495 KIAA0825Q8IV33 1275 aa32.51■■■□□ 2.79
SSBP4-202ENST00000348495 STRBPQ96SI9 672 aaKnown RBP32.51■■■□□ 2.79
SSBP4-202ENST00000348495 MRIQ9BWK5 157 aa32.51■■■□□ 2.79
SSBP4-202ENST00000348495 USP26Q9BXU7 913 aa32.51■■■□□ 2.79
SSBP4-202ENST00000348495 EPB41L2O43491 1005 aaKnown RBP32.5■■■□□ 2.79
SSBP4-202ENST00000348495 MBD4O95243 580 aa32.5■■■□□ 2.79
SSBP4-202ENST00000348495 EIF6P56537 245 aaKnown RBP32.5■■■□□ 2.79
SSBP4-202ENST00000348495 SLF2Q8IX21 1173 aa32.5■■■□□ 2.79
SSBP4-202ENST00000348495 AIDAQ96BJ3 306 aa32.5■■■□□ 2.79
SSBP4-202ENST00000348495 KIAA1211Q6ZU35 1233 aa32.49■■■□□ 2.79
SSBP4-202ENST00000348495 AGBL3Q8NEM8 1001 aa32.49■■■□□ 2.79
SSBP4-202ENST00000348495 UTRNP46939 3433 aa32.49■■■□□ 2.79
SSBP4-202ENST00000348495 MAGEB6P1A0A0J9YX57 407 aa32.48■■■□□ 2.79
SSBP4-202ENST00000348495 HDLBPQ00341 1268 aaKnown RBP32.48■■■□□ 2.79
SSBP4-202ENST00000348495 PTH1RQ03431 593 aa32.48■■■□□ 2.79
SSBP4-202ENST00000348495 ZNF541Q9H0D2 1346 aa32.48■■■□□ 2.79
SSBP4-202ENST00000348495 TIAM2Q8IVF5 1701 aa32.48■■■□□ 2.79
SSBP4-202ENST00000348495 HHIPL2Q6UWX4 724 aa32.48■■■□□ 2.79
SSBP4-202ENST00000348495 LCORLQ8N3X6 602 aa32.48■■■□□ 2.79
SSBP4-202ENST00000348495 ARMT1Q9H993 441 aa32.48■■■□□ 2.79
SSBP4-202ENST00000348495 RNF181Q9P0P0 153 aa32.48■■■□□ 2.79
SSBP4-202ENST00000348495 ZBTB12Q9Y330 459 aaPredicted RBP32.48■■■□□ 2.79
SSBP4-202ENST00000348495 GPR75-ASB3A0A0A6YYF3 556 aa32.47■■■□□ 2.79
SSBP4-202ENST00000348495 FOXP2O15409 715 aa32.47■■■□□ 2.79
SSBP4-202ENST00000348495 PPP4CP60510 307 aa32.47■■■□□ 2.79
SSBP4-202ENST00000348495 DAGLAQ9Y4D2 1042 aa32.47■■■□□ 2.79
SSBP4-202ENST00000348495 SCNN1DP51172 638 aa32.46■■■□□ 2.79
SSBP4-202ENST00000348495 VPS53Q5VIR6 699 aa32.46■■■□□ 2.79
SSBP4-202ENST00000348495 C9orf131Q5VYM1 1079 aa32.46■■■□□ 2.79
SSBP4-202ENST00000348495 MAP4K1Q92918 833 aa32.46■■■□□ 2.79
SSBP4-202ENST00000348495 HSPD1P10809 573 aaKnown RBP32.46■■■□□ 2.79
SSBP4-202ENST00000348495 DYNLL1P63167 89 aaKnown RBP32.46■■■□□ 2.79
SSBP4-202ENST00000348495 DSCC1Q9BVC3 393 aa32.46■■■□□ 2.79
SSBP4-202ENST00000348495 UPF2Q9HAU5 1272 aaKnown RBP32.46■■■□□ 2.79
SSBP4-202ENST00000348495 AATFQ9NY61 560 aaKnown RBP eCLIP32.46■■■□□ 2.79
SSBP4-202ENST00000348495 SERPINA10Q9UK55 444 aa32.46■■■□□ 2.79
SSBP4-202ENST00000348495 ADAMTSL1Q8N6G6 1762 aa32.45■■■□□ 2.79
SSBP4-202ENST00000348495 TEKT1Q969V4 418 aa32.45■■■□□ 2.78
SSBP4-202ENST00000348495 RPS12P25398 132 aaKnown RBP32.44■■■□□ 2.78
SSBP4-202ENST00000348495 CRKP46108 304 aa32.44■■■□□ 2.78
SSBP4-202ENST00000348495 ZDHHC15Q96MV8 337 aa32.43■■■□□ 2.78
SSBP4-202ENST00000348495 GNAT2P19087 354 aa32.43■■■□□ 2.78
SSBP4-202ENST00000348495 BTDP43251 543 aa32.43■■■□□ 2.78
SSBP4-202ENST00000348495 BAG3O95817 575 aa32.42■■■□□ 2.78
SSBP4-202ENST00000348495 CERS3Q8IU89 383 aa32.42■■■□□ 2.78
SSBP4-202ENST00000348495 USP17L8P0C7I0 530 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms