RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SUGT1Q9Y2Z0 365 aa14.48□□□□□ -0.09
SNCA-202ENST00000345009 TIAM2Q8IVF5 1701 aa14.48□□□□□ -0.09
SNCA-202ENST00000345009 ZNF609O15014 1411 aa14.48□□□□□ -0.09
SNCA-202ENST00000345009 ERICH6BQ5W0A0 696 aa14.47□□□□□ -0.09
SNCA-202ENST00000345009 SPTY2D1Q68D10 685 aaPredicted RBP14.47□□□□□ -0.09
SNCA-202ENST00000345009 ZNF512BQ96KM6 892 aaPredicted RBP14.47□□□□□ -0.09
SNCA-202ENST00000345009 DBNDD2Q9BQY9 259 aa14.47□□□□□ -0.09
SNCA-202ENST00000345009 NMRK2Q9NPI5 230 aa14.47□□□□□ -0.09
SNCA-202ENST00000345009 ADARB2Q9NS39 739 aaKnown RBP14.47□□□□□ -0.09
SNCA-202ENST00000345009 DBNLQ9UJU6 430 aaKnown RBP14.47□□□□□ -0.09
SNCA-202ENST00000345009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.47□□□□□ -0.09
SNCA-202ENST00000345009 PDS5AQ29RF7 1337 aaKnown RBP14.46□□□□□ -0.09
SNCA-202ENST00000345009 ARID4AP29374 1257 aaPredicted RBP14.46□□□□□ -0.09
SNCA-202ENST00000345009 EPHX2P34913 555 aa14.46□□□□□ -0.09
SNCA-202ENST00000345009 PSEN1P49768 467 aa14.46□□□□□ -0.09
SNCA-202ENST00000345009 SCNN1DP51172 638 aa14.46□□□□□ -0.09
SNCA-202ENST00000345009 USP50Q70EL3 339 aaPredicted RBP14.46□□□□□ -0.09
SNCA-202ENST00000345009 MICALL2Q8IY33 904 aa14.46□□□□□ -0.09
SNCA-202ENST00000345009 SPATA5Q8NB90 893 aa14.46□□□□□ -0.09
SNCA-202ENST00000345009 TAF1DQ9H5J8 278 aaPredicted RBP14.46□□□□□ -0.09
SNCA-202ENST00000345009 A0A1B0GUL6 1792 aa14.46□□□□□ -0.09
SNCA-202ENST00000345009 EPS15P42566 896 aa14.45□□□□□ -0.1
SNCA-202ENST00000345009 RASGRF1Q13972 1273 aa14.45□□□□□ -0.1
SNCA-202ENST00000345009 SMC5Q8IY18 1101 aa14.45□□□□□ -0.1
SNCA-202ENST00000345009 GMLQ99445 158 aa14.45□□□□□ -0.1
SNCA-202ENST00000345009 JAG2Q9Y219 1238 aa14.45□□□□□ -0.1
SNCA-202ENST00000345009 MAST3O60307 1309 aa14.44□□□□□ -0.1
SNCA-202ENST00000345009 SMARCA5O60264 1052 aaPredicted RBP14.44□□□□□ -0.1
SNCA-202ENST00000345009 IGSF3O75054 1194 aa14.44□□□□□ -0.1
SNCA-202ENST00000345009 IGHDP01880 384 aa14.44□□□□□ -0.1
SNCA-202ENST00000345009 LDHBP07195 334 aaKnown RBP14.44□□□□□ -0.1
SNCA-202ENST00000345009 ZNF280AP59817 542 aaPredicted RBP14.44□□□□□ -0.1
SNCA-202ENST00000345009 PDAP1Q13442 181 aaKnown RBP14.44□□□□□ -0.1
SNCA-202ENST00000345009 KIAA0825Q8IV33 1275 aa14.44□□□□□ -0.1
SNCA-202ENST00000345009 SLF2Q8IX21 1173 aa14.44□□□□□ -0.1
SNCA-202ENST00000345009 SLC39A7Q92504 469 aa14.44□□□□□ -0.1
SNCA-202ENST00000345009 TTF2Q9UNY4 1162 aaKnown RBP14.44□□□□□ -0.1
SNCA-202ENST00000345009 SALL1Q9NSC2 1324 aa14.43□□□□□ -0.1
SNCA-202ENST00000345009 POTECB2RU33 542 aa14.43□□□□□ -0.1
SNCA-202ENST00000345009 EAPPQ56P03 285 aaPredicted RBP14.43□□□□□ -0.1
SNCA-202ENST00000345009 B4GALNT3Q6L9W6 998 aa14.43□□□□□ -0.1
SNCA-202ENST00000345009 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.43□□□□□ -0.1
SNCA-202ENST00000345009 MXD3Q9BW11 206 aa14.43□□□□□ -0.1
SNCA-202ENST00000345009 MRIQ9BWK5 157 aa14.43□□□□□ -0.1
SNCA-202ENST00000345009 MYOZ2Q9NPC6 264 aa14.43□□□□□ -0.1
SNCA-202ENST00000345009 PLSCR2Q9NRY7 297 aa14.43□□□□□ -0.1
SNCA-202ENST00000345009 ECHDC1Q9NTX5 307 aa14.43□□□□□ -0.1
SNCA-202ENST00000345009 TLR7Q9NYK1 1049 aaKnown RBP14.43□□□□□ -0.1
SNCA-202ENST00000345009 HMG20BQ9P0W2 317 aa14.43□□□□□ -0.1
SNCA-202ENST00000345009 ABCF2Q9UG63 623 aa14.43□□□□□ -0.1
SNCA-202ENST00000345009 SCN9AQ15858 1988 aa14.43□□□□□ -0.1
SNCA-202ENST00000345009 WDR90Q96KV7 1748 aa14.42□□□□□ -0.1
SNCA-202ENST00000345009 F8W031 263 aaPredicted RBP14.42□□□□□ -0.1
SNCA-202ENST00000345009 ERC2O15083 957 aa14.42□□□□□ -0.1
SNCA-202ENST00000345009 TOMM70O94826 608 aa14.42□□□□□ -0.1
SNCA-202ENST00000345009 ATP5JP18859 108 aa14.42□□□□□ -0.1
SNCA-202ENST00000345009 RBM5P52756 815 aaKnown RBP eCLIP14.42□□□□□ -0.1
SNCA-202ENST00000345009 HDLBPQ00341 1268 aaKnown RBP14.42□□□□□ -0.1
SNCA-202ENST00000345009 TTF1Q15361 905 aaPredicted RBP14.42□□□□□ -0.1
SNCA-202ENST00000345009 DLGAP5Q15398 846 aa14.42□□□□□ -0.1
SNCA-202ENST00000345009 RBM26Q5T8P6 1007 aaKnown RBP14.42□□□□□ -0.1
SNCA-202ENST00000345009 ERICH6Q7L0X2 663 aa14.42□□□□□ -0.1
SNCA-202ENST00000345009 CERS5Q8N5B7 392 aa14.42□□□□□ -0.1
SNCA-202ENST00000345009 ZC3H15Q8WU90 426 aaKnown RBP14.42□□□□□ -0.1
SNCA-202ENST00000345009 CCDC136Q96JN2 1154 aa14.42□□□□□ -0.1
SNCA-202ENST00000345009 LRP2BPQ9P2M1 347 aa14.42□□□□□ -0.1
SNCA-202ENST00000345009 SERPINA10Q9UK55 444 aa14.42□□□□□ -0.1
SNCA-202ENST00000345009 SCN4AP35499 1836 aa14.42□□□□□ -0.1
SNCA-202ENST00000345009 RIOK3O14730 519 aaKnown RBP14.41□□□□□ -0.1
SNCA-202ENST00000345009 KIF3CO14782 793 aa14.41□□□□□ -0.1
SNCA-202ENST00000345009 MYO1BO43795 1136 aa14.41□□□□□ -0.1
SNCA-202ENST00000345009 MCAMP43121 646 aa14.41□□□□□ -0.1
SNCA-202ENST00000345009 NUCB1Q02818 461 aa14.41□□□□□ -0.1
SNCA-202ENST00000345009 KIF4BQ2VIQ3 1234 aa14.41□□□□□ -0.1
SNCA-202ENST00000345009 CHD1LQ86WJ1 897 aa14.41□□□□□ -0.1
SNCA-202ENST00000345009 LDHDQ86WU2 507 aa14.41□□□□□ -0.1
SNCA-202ENST00000345009 DZIP1Q86YF9 867 aaKnown RBP14.41□□□□□ -0.1
SNCA-202ENST00000345009 TEKT1Q969V4 418 aa14.41□□□□□ -0.1
SNCA-202ENST00000345009 METRNQ9UJH8 293 aa14.41□□□□□ -0.1
SNCA-202ENST00000345009 TTC41PQ6P2S7 1318 aa14.41□□□□□ -0.1
SNCA-202ENST00000345009 LDHCP07864 332 aa14.4□□□□□ -0.1
SNCA-202ENST00000345009 C7P10643 843 aa14.4□□□□□ -0.1
SNCA-202ENST00000345009 GSTO1P78417 241 aa14.4□□□□□ -0.1
SNCA-202ENST00000345009 TBC1D10BQ4KMP7 808 aaPredicted RBP14.4□□□□□ -0.1
SNCA-202ENST00000345009 TMED8Q6PL24 325 aaPredicted RBP14.4□□□□□ -0.1
SNCA-202ENST00000345009 SAMD7Q7Z3H4 446 aa14.4□□□□□ -0.1
SNCA-202ENST00000345009 SNRKQ9NRH2 765 aa14.4□□□□□ -0.1
SNCA-202ENST00000345009 RAI14Q9P0K7 980 aa14.4□□□□□ -0.1
SNCA-202ENST00000345009 ARAP2Q8WZ64 1704 aa14.39□□□□□ -0.11
SNCA-202ENST00000345009 GLRX3O76003 335 aaKnown RBP14.39□□□□□ -0.11
SNCA-202ENST00000345009 MX1P20591 662 aa14.39□□□□□ -0.11
SNCA-202ENST00000345009 MAP3K12Q12852 859 aa14.39□□□□□ -0.11
SNCA-202ENST00000345009 SCARF1Q14162 830 aa14.39□□□□□ -0.11
SNCA-202ENST00000345009 HHIPL2Q6UWX4 724 aa14.39□□□□□ -0.11
SNCA-202ENST00000345009 CENPQQ7L2Z9 268 aaPredicted RBP14.39□□□□□ -0.11
SNCA-202ENST00000345009 MTMR14Q8NCE2 650 aa14.39□□□□□ -0.11
SNCA-202ENST00000345009 SMC1BQ8NDV3 1235 aa14.39□□□□□ -0.11
SNCA-202ENST00000345009 RBM46Q8TBY0 533 aaKnown RBP14.39□□□□□ -0.11
SNCA-202ENST00000345009 DCPSQ96C86 337 aaKnown RBP14.39□□□□□ -0.11
SNCA-202ENST00000345009 LNPKQ9C0E8 428 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms