RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 MYH13Q9UKX3 1938 aa19.08■□□□□ 0.65
VAPA-201ENST00000340541 MLLT1Q03111 559 aaPredicted RBP19.08■□□□□ 0.64
VAPA-201ENST00000340541 PDE3AQ14432 1141 aa19.08■□□□□ 0.64
VAPA-201ENST00000340541 MFSD14BQ5SR56 506 aa19.08■□□□□ 0.64
VAPA-201ENST00000340541 CEP85Q6P2H3 762 aa19.08■□□□□ 0.64
VAPA-201ENST00000340541 POTEDQ86YR6 584 aa19.08■□□□□ 0.64
VAPA-201ENST00000340541 COL1A1P02452 1464 aaPredicted RBP19.08■□□□□ 0.64
VAPA-201ENST00000340541 ADORA1P30542 326 aa19.07■□□□□ 0.64
VAPA-201ENST00000340541 GRIK5Q16478 980 aa19.07■□□□□ 0.64
VAPA-201ENST00000340541 APOBEC3FQ8IUX4 373 aaKnown RBP19.07■□□□□ 0.64
VAPA-201ENST00000340541 ZBTB40Q9NUA8 1239 aa19.07■□□□□ 0.64
VAPA-201ENST00000340541 DDX19BQ9UMR2 479 aa19.07■□□□□ 0.64
VAPA-201ENST00000340541 F8W031 263 aaPredicted RBP19.06■□□□□ 0.64
VAPA-201ENST00000340541 TIMM10P62072 90 aa19.06■□□□□ 0.64
VAPA-201ENST00000340541 MTMR14Q8NCE2 650 aa19.06■□□□□ 0.64
VAPA-201ENST00000340541 NOP58Q9Y2X3 529 aaKnown RBP19.06■□□□□ 0.64
VAPA-201ENST00000340541 PCDHAC2Q9Y5I4 1007 aa19.06■□□□□ 0.64
VAPA-201ENST00000340541 ECM29Q5VYK3 1845 aa19.05■□□□□ 0.64
VAPA-201ENST00000340541 A0A1B0GUL7 405 aa19.05■□□□□ 0.64
VAPA-201ENST00000340541 UBE2Q2LH0YL09 131 aa19.05■□□□□ 0.64
VAPA-201ENST00000340541 ZBTB22O15209 634 aa19.05■□□□□ 0.64
VAPA-201ENST00000340541 PHKA1P46020 1223 aa19.05■□□□□ 0.64
VAPA-201ENST00000340541 TM4SF4P48230 202 aa19.05■□□□□ 0.64
VAPA-201ENST00000340541 CHAF1AQ13111 956 aaPredicted RBP19.05■□□□□ 0.64
VAPA-201ENST00000340541 G3BP1Q13283 466 aaKnown RBP eCLIP19.05■□□□□ 0.642e-6■■■■□ 24.6
VAPA-201ENST00000340541 ARMC9Q7Z3E5 817 aa19.05■□□□□ 0.64
VAPA-201ENST00000340541 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.05■□□□□ 0.64
VAPA-201ENST00000340541 NOM1Q5C9Z4 860 aaKnown RBP19.04■□□□□ 0.64
VAPA-201ENST00000340541 AKAP2Q9Y2D5 859 aa19.04■□□□□ 0.64
VAPA-201ENST00000340541 AOX1Q06278 1338 aa19.03■□□□□ 0.64
VAPA-201ENST00000340541 FRAT2O75474 233 aaPredicted RBP19.03■□□□□ 0.64
VAPA-201ENST00000340541 SURF6O75683 361 aaKnown RBP19.03■□□□□ 0.64
VAPA-201ENST00000340541 TTLL12Q14166 644 aaPredicted RBP19.03■□□□□ 0.64
VAPA-201ENST00000340541 DLGAP5Q15398 846 aa19.03■□□□□ 0.64
VAPA-201ENST00000340541 CFAP100Q494V2 611 aa19.03■□□□□ 0.64
VAPA-201ENST00000340541 PRAMEF18Q5VWM3 479 aa19.03■□□□□ 0.64
VAPA-201ENST00000340541 CCDC102BQ68D86 513 aa19.03■□□□□ 0.64
VAPA-201ENST00000340541 MOB2Q70IA6 237 aa19.03■□□□□ 0.64
VAPA-201ENST00000340541 TBC1D22AQ8WUA7 517 aa19.03■□□□□ 0.64
VAPA-201ENST00000340541 XAGE2Q96GT9 111 aa19.03■□□□□ 0.64
VAPA-201ENST00000340541 TTF2Q9UNY4 1162 aaKnown RBP19.03■□□□□ 0.64
VAPA-201ENST00000340541 SCAF8Q9UPN6 1271 aaKnown RBP19.03■□□□□ 0.64
VAPA-201ENST00000340541 PPP2R3BQ9Y5P8 575 aa19.03■□□□□ 0.64
VAPA-201ENST00000340541 SPDYE2BA6NHP3 402 aa19.02■□□□□ 0.64
VAPA-201ENST00000340541 UNCXA6NJT0 531 aa19.02■□□□□ 0.64
VAPA-201ENST00000340541 SPDYE6P0CI01 402 aa19.02■□□□□ 0.64
VAPA-201ENST00000340541 PKN2Q16513 984 aaKnown RBP19.02■□□□□ 0.64
VAPA-201ENST00000340541 LDLRAD1Q5T700 205 aa19.02■□□□□ 0.64
VAPA-201ENST00000340541 CTU1Q7Z7A3 348 aaKnown RBP19.02■□□□□ 0.64
VAPA-201ENST00000340541 SIRT2Q8IXJ6 389 aa19.02■□□□□ 0.64
VAPA-201ENST00000340541 PRMT6Q96LA8 375 aaPredicted RBP19.02■□□□□ 0.64
VAPA-201ENST00000340541 SEMA3EO15041 775 aa19.01■□□□□ 0.63
VAPA-201ENST00000340541 SREBF2Q12772 1141 aa19.01■□□□□ 0.63
VAPA-201ENST00000340541 GPR108Q9NPR9 543 aa19.01■□□□□ 0.63
VAPA-201ENST00000340541 SERPINA10Q9UK55 444 aa19.01■□□□□ 0.63
VAPA-201ENST00000340541 MYO1BO43795 1136 aa19■□□□□ 0.63
VAPA-201ENST00000340541 INHBEP58166 350 aa19■□□□□ 0.63
VAPA-201ENST00000340541 MAP3K11Q16584 847 aa19■□□□□ 0.63
VAPA-201ENST00000340541 RPAP2Q8IXW5 612 aaPredicted RBP19■□□□□ 0.63
VAPA-201ENST00000340541 WDR66Q8TBY9 1149 aa19■□□□□ 0.63
VAPA-201ENST00000340541 CFHR5Q9BXR6 569 aa19■□□□□ 0.63
VAPA-201ENST00000340541 DEFB129Q9H1M3 183 aa19■□□□□ 0.63
VAPA-201ENST00000340541 GNL3LQ9NVN8 582 aaKnown RBP19■□□□□ 0.63
VAPA-201ENST00000340541 SUGT1Q9Y2Z0 365 aa19■□□□□ 0.63
VAPA-201ENST00000340541 RASGRF1Q13972 1273 aa18.99■□□□□ 0.63
VAPA-201ENST00000340541 TNNI3KQ59H18 835 aa18.99■□□□□ 0.63
VAPA-201ENST00000340541 NEUROD6Q96NK8 337 aa18.99■□□□□ 0.63
VAPA-201ENST00000340541 CHMP4BQ9H444 224 aaKnown RBP18.99■□□□□ 0.63
VAPA-201ENST00000340541 DENND2AQ9ULE3 1009 aa18.99■□□□□ 0.63
VAPA-201ENST00000340541 FPGT-TNNI3KV9GXZ4 949 aa18.99■□□□□ 0.63
VAPA-201ENST00000340541 SALL1Q9NSC2 1324 aa18.99■□□□□ 0.63
VAPA-201ENST00000340541 CRKP46108 304 aa18.98■□□□□ 0.63
VAPA-201ENST00000340541 RRP1P56182 461 aaKnown RBP18.98■□□□□ 0.63
VAPA-201ENST00000340541 HDLBPQ00341 1268 aaKnown RBP18.98■□□□□ 0.63
VAPA-201ENST00000340541 OS9Q13438 667 aaPredicted RBP18.98■□□□□ 0.63
VAPA-201ENST00000340541 SUPT20HL1Q3ZLR7 823 aa18.98■□□□□ 0.63
VAPA-201ENST00000340541 EXOC6BQ9Y2D4 811 aa18.98■□□□□ 0.63
VAPA-201ENST00000340541 PDS5AQ29RF7 1337 aaKnown RBP18.98■□□□□ 0.63
VAPA-201ENST00000340541 PPP1R12BO60237 982 aaPredicted RBP18.97■□□□□ 0.63
VAPA-201ENST00000340541 ALDH1A1P00352 501 aa18.97■□□□□ 0.63
VAPA-201ENST00000340541 RBM5P52756 815 aaKnown RBP eCLIP18.97■□□□□ 0.63
VAPA-201ENST00000340541 SPRYD7Q5W111 196 aa18.97■□□□□ 0.63
VAPA-201ENST00000340541 MRIQ9BWK5 157 aa18.97■□□□□ 0.63
VAPA-201ENST00000340541 CLRN2A0PK11 232 aa18.96■□□□□ 0.63
VAPA-201ENST00000340541 TBC1D8O95759 1140 aa18.96■□□□□ 0.63
VAPA-201ENST00000340541 ARID4AP29374 1257 aaPredicted RBP18.96■□□□□ 0.63
VAPA-201ENST00000340541 PRDX5P30044 214 aa18.96■□□□□ 0.63
VAPA-201ENST00000340541 SLC10A4Q96EP9 437 aa18.96■□□□□ 0.63
VAPA-201ENST00000340541 ANGEL1Q9UNK9 670 aaKnown RBP18.96■□□□□ 0.63
VAPA-201ENST00000340541 ZBTB48P10074 688 aaPredicted RBP18.95■□□□□ 0.62
VAPA-201ENST00000340541 SPDYE2Q495Y8 402 aa18.95■□□□□ 0.62
VAPA-201ENST00000340541 ZNF296Q8WUU4 475 aaPredicted RBP18.95■□□□□ 0.62
VAPA-201ENST00000340541 TEKT1Q969V4 418 aa18.95■□□□□ 0.62
VAPA-201ENST00000340541 EAF2Q96CJ1 260 aaPredicted RBP18.95■□□□□ 0.62
VAPA-201ENST00000340541 ZDHHC15Q96MV8 337 aa18.95■□□□□ 0.62
VAPA-201ENST00000340541 DBNDD2Q9BQY9 259 aa18.95■□□□□ 0.62
VAPA-201ENST00000340541 TDRD3Q9H7E2 651 aaKnown RBP18.95■□□□□ 0.62
VAPA-201ENST00000340541 HMG20BQ9P0W2 317 aa18.95■□□□□ 0.62
VAPA-201ENST00000340541 ZNF70Q9UC06 446 aaPredicted RBP18.95■□□□□ 0.62
VAPA-201ENST00000340541 MAST3O60307 1309 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms