RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 VEZTQ9HBM0 779 aa18.07■□□□□ 0.48
ERCC1-203ENST00000340192 MAST3O60307 1309 aa18.06■□□□□ 0.48
ERCC1-203ENST00000340192 SEMA3EO15041 775 aa18.06■□□□□ 0.48
ERCC1-203ENST00000340192 FOXN1O15353 648 aa18.06■□□□□ 0.48
ERCC1-203ENST00000340192 NF2P35240 595 aa18.06■□□□□ 0.48
ERCC1-203ENST00000340192 ZNF157P51786 506 aaPredicted RBP18.06■□□□□ 0.48
ERCC1-203ENST00000340192 HDLBPQ00341 1268 aaKnown RBP18.06■□□□□ 0.48
ERCC1-203ENST00000340192 MVPQ14764 893 aaKnown RBP18.06■□□□□ 0.48
ERCC1-203ENST00000340192 TEKT1Q969V4 418 aa18.06■□□□□ 0.48
ERCC1-203ENST00000340192 AIDAQ96BJ3 306 aa18.06■□□□□ 0.48
ERCC1-203ENST00000340192 NEUROD6Q96NK8 337 aa18.06■□□□□ 0.48
ERCC1-203ENST00000340192 TDRD3Q9H7E2 651 aaKnown RBP18.06■□□□□ 0.48
ERCC1-203ENST00000340192 ZNF70Q9UC06 446 aaPredicted RBP18.06■□□□□ 0.48
ERCC1-203ENST00000340192 DENND2AQ9ULE3 1009 aa18.06■□□□□ 0.48
ERCC1-203ENST00000340192 FAM155AB1AL88 458 aaPredicted RBP18.05■□□□□ 0.48
ERCC1-203ENST00000340192 TTLL12Q14166 644 aaPredicted RBP18.05■□□□□ 0.48
ERCC1-203ENST00000340192 SPDYE2Q495Y8 402 aa18.05■□□□□ 0.48
ERCC1-203ENST00000340192 CEP85Q6P2H3 762 aa18.05■□□□□ 0.48
ERCC1-203ENST00000340192 COG6Q9Y2V7 657 aa18.05■□□□□ 0.48
ERCC1-203ENST00000340192 PPP2R3BQ9Y5P8 575 aa18.05■□□□□ 0.48
ERCC1-203ENST00000340192 ZBTB22O15209 634 aa18.04■□□□□ 0.48
ERCC1-203ENST00000340192 SURF6O75683 361 aaKnown RBP18.04■□□□□ 0.48
ERCC1-203ENST00000340192 NOGQ13253 232 aa18.04■□□□□ 0.48
ERCC1-203ENST00000340192 OS9Q13438 667 aaPredicted RBP18.04■□□□□ 0.48
ERCC1-203ENST00000340192 RASGRF1Q13972 1273 aa18.04■□□□□ 0.48
ERCC1-203ENST00000340192 CCDC102AQ96A19 550 aa18.04■□□□□ 0.48
ERCC1-203ENST00000340192 ZDHHC15Q96MV8 337 aa18.04■□□□□ 0.48
ERCC1-203ENST00000340192 MRIQ9BWK5 157 aa18.04■□□□□ 0.48
ERCC1-203ENST00000340192 DDX19BQ9UMR2 479 aa18.04■□□□□ 0.48
ERCC1-203ENST00000340192 SALL1Q9NSC2 1324 aa18.03■□□□□ 0.48
ERCC1-203ENST00000340192 UBE2Q2LH0YL09 131 aa18.03■□□□□ 0.48
ERCC1-203ENST00000340192 PRDX5P30044 214 aa18.03■□□□□ 0.48
ERCC1-203ENST00000340192 TNFAIP1Q13829 316 aa18.03■□□□□ 0.48
ERCC1-203ENST00000340192 PRKG1Q13976 671 aa18.03■□□□□ 0.48
ERCC1-203ENST00000340192 RASA3Q14644 834 aa18.03■□□□□ 0.48
ERCC1-203ENST00000340192 GORABQ5T7V8 394 aa18.03■□□□□ 0.48
ERCC1-203ENST00000340192 ZIC5Q96T25 663 aa18.03■□□□□ 0.48
ERCC1-203ENST00000340192 SSC5DA1L4H1 1573 aa18.03■□□□□ 0.48
ERCC1-203ENST00000340192 PDS5AQ29RF7 1337 aaKnown RBP18.02■□□□□ 0.48
ERCC1-203ENST00000340192 MYH2Q9UKX2 1941 aa18.02■□□□□ 0.48
ERCC1-203ENST00000340192 LDHBP07195 334 aaKnown RBP18.02■□□□□ 0.48
ERCC1-203ENST00000340192 SLC10A3P09131 477 aa18.02■□□□□ 0.48
ERCC1-203ENST00000340192 COL13A1Q5TAT6 717 aaPredicted RBP18.02■□□□□ 0.48
ERCC1-203ENST00000340192 C20orf194Q5TEA3 1177 aa18.02■□□□□ 0.48
ERCC1-203ENST00000340192 HHIPL2Q6UWX4 724 aa18.02■□□□□ 0.48
ERCC1-203ENST00000340192 BEGAINQ9BUH8 593 aa18.02■□□□□ 0.48
ERCC1-203ENST00000340192 NOP58Q9Y2X3 529 aaKnown RBP18.02■□□□□ 0.48
ERCC1-203ENST00000340192 TCP10L2B9ZVM9 353 aa18.01■□□□□ 0.47
ERCC1-203ENST00000340192 CTCFP49711 727 aaPredicted RBP18.01■□□□□ 0.47
ERCC1-203ENST00000340192 DIXDC1Q155Q3 683 aa18.01■□□□□ 0.47
ERCC1-203ENST00000340192 SUPT20HL1Q3ZLR7 823 aa18.01■□□□□ 0.47
ERCC1-203ENST00000340192 NBPF12Q5TAG4 269 aaPredicted RBP18.01■□□□□ 0.47
ERCC1-203ENST00000340192 APOBEC3HQ6NTF7 200 aaKnown RBP18.01■□□□□ 0.47
ERCC1-203ENST00000340192 ARMC9Q7Z3E5 817 aa18.01■□□□□ 0.47
ERCC1-203ENST00000340192 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.01■□□□□ 0.47
ERCC1-203ENST00000340192 GPR108Q9NPR9 543 aa18.01■□□□□ 0.47
ERCC1-203ENST00000340192 ZBTB40Q9NUA8 1239 aa18.01■□□□□ 0.47
ERCC1-203ENST00000340192 FZD1Q9UP38 647 aa18.01■□□□□ 0.47
ERCC1-203ENST00000340192 CACNB3P54284 484 aa18■□□□□ 0.47
ERCC1-203ENST00000340192 PDE3AQ14432 1141 aa18■□□□□ 0.47
ERCC1-203ENST00000340192 TNNI3KQ59H18 835 aa18■□□□□ 0.47
ERCC1-203ENST00000340192 RASAL3Q86YV0 1011 aa18■□□□□ 0.47
ERCC1-203ENST00000340192 ZGPATQ8N5A5 531 aaKnown RBP18■□□□□ 0.47
ERCC1-203ENST00000340192 YTHDC1Q96MU7 727 aaKnown RBP18■□□□□ 0.47
ERCC1-203ENST00000340192 ANGEL1Q9UNK9 670 aaKnown RBP18■□□□□ 0.47
ERCC1-203ENST00000340192 FPGT-TNNI3KV9GXZ4 949 aa18■□□□□ 0.47
ERCC1-203ENST00000340192 ARID4AP29374 1257 aaPredicted RBP17.99■□□□□ 0.47
ERCC1-203ENST00000340192 TNNI2P48788 182 aa17.99■□□□□ 0.47
ERCC1-203ENST00000340192 TMEM39BQ9GZU3 492 aa17.99■□□□□ 0.47
ERCC1-203ENST00000340192 ABCF2Q9UG63 623 aa17.99■□□□□ 0.47
ERCC1-203ENST00000340192 DAGLAQ9Y4D2 1042 aa17.99■□□□□ 0.47
ERCC1-203ENST00000340192 AKAP11Q9UKA4 1901 aa17.99■□□□□ 0.47
ERCC1-203ENST00000340192 PPP1R12BO60237 982 aaPredicted RBP17.98■□□□□ 0.47
ERCC1-203ENST00000340192 KIF23Q02241 960 aaPredicted RBP17.98■□□□□ 0.47
ERCC1-203ENST00000340192 LDLRAD1Q5T700 205 aa17.98■□□□□ 0.47
ERCC1-203ENST00000340192 PI16Q6UXB8 463 aa17.98■□□□□ 0.47
ERCC1-203ENST00000340192 CDAN1Q8IWY9 1227 aa17.98■□□□□ 0.47
ERCC1-203ENST00000340192 SPATA5Q8NB90 893 aa17.98■□□□□ 0.47
ERCC1-203ENST00000340192 TEPSINQ96N21 525 aa17.98■□□□□ 0.47
ERCC1-203ENST00000340192 CHMP4BQ9H444 224 aaKnown RBP17.98■□□□□ 0.47
ERCC1-203ENST00000340192 TMOD2Q9NZR1 351 aa17.98■□□□□ 0.47
ERCC1-203ENST00000340192 HMG20BQ9P0W2 317 aa17.98■□□□□ 0.47
ERCC1-203ENST00000340192 EXOC6BQ9Y2D4 811 aa17.98■□□□□ 0.47
ERCC1-203ENST00000340192 OTOFQ9HC10 1997 aa17.98■□□□□ 0.47
ERCC1-203ENST00000340192 HSPA8P11142 646 aaKnown RBP17.97■□□□□ 0.47
ERCC1-203ENST00000340192 LBX1P52954 281 aa17.97■□□□□ 0.47
ERCC1-203ENST00000340192 MAP3K11Q16584 847 aa17.97■□□□□ 0.47
ERCC1-203ENST00000340192 SPTY2D1Q68D10 685 aaPredicted RBP17.97■□□□□ 0.47
ERCC1-203ENST00000340192 DZIP1Q86YF9 867 aaKnown RBP17.97■□□□□ 0.47
ERCC1-203ENST00000340192 RPAP2Q8IXW5 612 aaPredicted RBP17.97■□□□□ 0.47
ERCC1-203ENST00000340192 DBNDD2Q9BQY9 259 aa17.97■□□□□ 0.47
ERCC1-203ENST00000340192 UQCRFS1P1P0C7P4 283 aa17.96■□□□□ 0.47
ERCC1-203ENST00000340192 MCAMP43121 646 aa17.96■□□□□ 0.47
ERCC1-203ENST00000340192 FKBP1CQ5VVH2 108 aa17.96■□□□□ 0.47
ERCC1-203ENST00000340192 CDC42EP5Q6NZY7 148 aa17.96■□□□□ 0.47
ERCC1-203ENST00000340192 SIRT2Q8IXJ6 389 aa17.96■□□□□ 0.47
ERCC1-203ENST00000340192 PRDM10Q9NQV6 1147 aa17.96■□□□□ 0.47
ERCC1-203ENST00000340192 TSKSQ9UJT2 592 aa17.96■□□□□ 0.47
ERCC1-203ENST00000340192 CA12O43570 354 aa17.95■□□□□ 0.46
ERCC1-203ENST00000340192 USP2O75604 605 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms