RNA–Protein interactions for RNA: ENST00000340160.7

TSPAN18-201, Transcript of tetraspanin 18, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN18, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-201ENST00000340160 HMGB1P09429 215 aaKnown RBP11.35□□□□□ -0.59
TSPAN18-201ENST00000340160 XBP1P17861 261 aa11.35□□□□□ -0.59
TSPAN18-201ENST00000340160 NUCB2P80303 420 aa11.35□□□□□ -0.59
TSPAN18-201ENST00000340160 MFSD6Q6ZSS7 791 aa11.35□□□□□ -0.59
TSPAN18-201ENST00000340160 H3BQV1 296 aa11.35□□□□□ -0.59
TSPAN18-201ENST00000340160 MBD4O95243 580 aa11.35□□□□□ -0.59
TSPAN18-201ENST00000340160 ADORA1P30542 326 aa11.35□□□□□ -0.59
TSPAN18-201ENST00000340160 RABEP1Q15276 862 aa11.35□□□□□ -0.59
TSPAN18-201ENST00000340160 IFFO2Q5TF58 517 aa11.35□□□□□ -0.59
TSPAN18-201ENST00000340160 DCPSQ96C86 337 aaKnown RBP11.35□□□□□ -0.59
TSPAN18-201ENST00000340160 CCDC39Q9UFE4 941 aa11.35□□□□□ -0.59
TSPAN18-201ENST00000340160 DBNLQ9UJU6 430 aaKnown RBP11.35□□□□□ -0.59
TSPAN18-201ENST00000340160 RAD50Q92878 1312 aa11.35□□□□□ -0.59
TSPAN18-201ENST00000340160 TSPY2A6NKD2 308 aa11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 IARSP41252 1262 aaKnown RBP11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 RBM25P49756 843 aaKnown RBP11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 AOC3Q16853 763 aa11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 KLHL40Q2TBA0 621 aa11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 SULF1Q8IWU6 871 aa11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 TNPO1Q92973 898 aaKnown RBP11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 CD209Q9NNX6 404 aa11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 CCDC178Q5BJE1 867 aa11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 TBC1D9Q6ZT07 1266 aa11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 TBC1D16Q8TBP0 767 aa11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 JAKMIP1Q96N16 626 aaKnown RBP11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 RGPD5Q99666 1765 aa11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 VPS53Q5VIR6 699 aa11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 FHDC1Q9C0D6 1143 aaPredicted RBP11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 HMG20BQ9P0W2 317 aa11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 DDX49Q9Y6V7 483 aaKnown RBP11.34□□□□□ -0.59
TSPAN18-201ENST00000340160 ZNF500O60304 480 aaPredicted RBP11.33□□□□□ -0.59
TSPAN18-201ENST00000340160 ECE2O60344 883 aa11.33□□□□□ -0.59
TSPAN18-201ENST00000340160 SASH1O94885 1247 aa11.33□□□□□ -0.59
TSPAN18-201ENST00000340160 NMIQ13287 307 aaPredicted RBP11.33□□□□□ -0.59
TSPAN18-201ENST00000340160 BCL2L12Q9HB09 334 aa11.33□□□□□ -0.59
TSPAN18-201ENST00000340160 USP40Q9NVE5 1235 aa11.33□□□□□ -0.59
TSPAN18-201ENST00000340160 ZNRF3Q9ULT6 936 aa11.33□□□□□ -0.59
TSPAN18-201ENST00000340160 RIPOR2Q9Y4F9 1068 aa11.33□□□□□ -0.59
TSPAN18-201ENST00000340160 HAUS7Q99871 368 aa11.33□□□□□ -0.6
TSPAN18-201ENST00000340160 SAFBQ15424 915 aaKnown RBP eCLIP11.33□□□□□ -0.6
TSPAN18-201ENST00000340160 ZRSR1Q15695 479 aaKnown RBP11.33□□□□□ -0.6
TSPAN18-201ENST00000340160 OTUD7AQ8TE49 926 aaPredicted RBP11.33□□□□□ -0.6
TSPAN18-201ENST00000340160 NUP133Q8WUM0 1156 aa11.33□□□□□ -0.6
TSPAN18-201ENST00000340160 AATFQ9NY61 560 aaKnown RBP eCLIP11.33□□□□□ -0.6
TSPAN18-201ENST00000340160 SCNN1DP51172 638 aa11.33□□□□□ -0.6
TSPAN18-201ENST00000340160 FAM13BQ9NYF5 915 aa11.33□□□□□ -0.6
TSPAN18-201ENST00000340160 IQCA1LA6NCM1 817 aa11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 USP17L8P0C7I0 530 aa11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 ESR2Q92731 530 aa11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 GPR101Q96P66 508 aaPredicted RBP11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 KRT23Q9C075 422 aa11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 CNNM2Q9H8M5 875 aa11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 ZNF408Q9H9D4 720 aa11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 SASS6Q6UVJ0 657 aa11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 ZNF532Q9HCE3 1301 aa11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 LMNB1P20700 586 aa11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 HOXA10P31260 410 aaPredicted RBP11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 HAND2P61296 217 aa11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 TMED8Q6PL24 325 aaPredicted RBP11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 TRIM22Q8IYM9 498 aa11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 NOL7Q9UMY1 257 aaKnown RBP11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 R3HCC1Q9Y3T6 440 aaKnown RBP11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 CCDC171Q6TFL3 1326 aa11.32□□□□□ -0.6
TSPAN18-201ENST00000340160 SLC4A8Q2Y0W8 1093 aa11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 UTP14CQ5TAP6 766 aaKnown RBP11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 NCOA7Q8NI08 942 aa11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 ZNF526Q8TF50 670 aaPredicted RBP11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 HMGN5P82970 282 aaKnown RBP11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 CLEC17AQ6ZS10 378 aa11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 ESYT1Q9BSJ8 1104 aa11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 BRMS1Q9HCU9 246 aa11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 SMC3Q9UQE7 1217 aa11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 GLI3P10071 1580 aa11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 IFIT3O14879 490 aaKnown RBP11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 TSPY3P0CV98 308 aa11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 TSPY8P0CW00 308 aa11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 PDE6AP16499 860 aa11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 ZNF445P59923 1031 aa11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 DCAF15Q66K64 600 aa11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 SIRT2Q8IXJ6 389 aa11.31□□□□□ -0.6
TSPAN18-201ENST00000340160 K7ELQ4 463 aaPredicted RBP11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 GPAA1O43292 621 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 ARMT1Q9H993 441 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 UQCRHLA0A096LP55 91 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 UQCRHP07919 91 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 CTCFLQ8NI51 663 aaPredicted RBP11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 PDRG1Q9NUG6 133 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 A0A0U1RQG5 324 aaPredicted RBP11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 CCDC196A0A1B0GTZ2 297 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 SNAP23O00161 211 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 SOCS7O14512 581 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 UBE3CQ15386 1083 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 STAP2Q9UGK3 403 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 NDUFB9Q9Y6M9 179 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 CDKL5O76039 1030 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 CHMLP26374 656 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 CCDC96Q2M329 555 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 TAF3Q5VWG9 929 aa11.3□□□□□ -0.6
TSPAN18-201ENST00000340160 PICK1Q9NRD5 415 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms