RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 CT47B1P0C2W7 299 aaPredicted RBP16.71■□□□□ 0.27
NUDCD3-201ENST00000338427 PUM3Q15397 648 aaKnown RBP16.71■□□□□ 0.27
NUDCD3-201ENST00000338427 TMEM39BQ9GZU3 492 aa16.71■□□□□ 0.27
NUDCD3-201ENST00000338427 PPP1R12BO60237 982 aaPredicted RBP16.7■□□□□ 0.26
NUDCD3-201ENST00000338427 GJA5P36382 358 aa16.7■□□□□ 0.26
NUDCD3-201ENST00000338427 MAP3K11Q16584 847 aa16.7■□□□□ 0.26
NUDCD3-201ENST00000338427 SUPT20HL1Q3ZLR7 823 aa16.7■□□□□ 0.26
NUDCD3-201ENST00000338427 FRAT1Q92837 279 aaPredicted RBP16.7■□□□□ 0.26
NUDCD3-201ENST00000338427 TEPSINQ96N21 525 aa16.7■□□□□ 0.26
NUDCD3-201ENST00000338427 SLC5A1P13866 664 aa16.69■□□□□ 0.26
NUDCD3-201ENST00000338427 ADORA1P30542 326 aa16.69■□□□□ 0.26
NUDCD3-201ENST00000338427 TIMM10P62072 90 aa16.69■□□□□ 0.26
NUDCD3-201ENST00000338427 REM2Q8IYK8 340 aaPredicted RBP16.69■□□□□ 0.26
NUDCD3-201ENST00000338427 LPIN2Q92539 896 aa16.69■□□□□ 0.26
NUDCD3-201ENST00000338427 CLUAP1Q96AJ1 413 aa16.69■□□□□ 0.26
NUDCD3-201ENST00000338427 CEP126Q9P2H0 1117 aa16.69■□□□□ 0.26
NUDCD3-201ENST00000338427 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.69■□□□□ 0.26
NUDCD3-201ENST00000338427 INTS3Q68E01 1043 aaKnown RBP16.68■□□□□ 0.26
NUDCD3-201ENST00000338427 APOBEC3HQ6NTF7 200 aaKnown RBP16.68■□□□□ 0.26
NUDCD3-201ENST00000338427 ZNF296Q8WUU4 475 aaPredicted RBP16.68■□□□□ 0.26
NUDCD3-201ENST00000338427 CNKSR2Q8WXI2 1034 aa16.68■□□□□ 0.26
NUDCD3-201ENST00000338427 WNK4Q96J92 1243 aa16.68■□□□□ 0.26
NUDCD3-201ENST00000338427 PPP2R3BQ9Y5P8 575 aa16.68■□□□□ 0.26
NUDCD3-201ENST00000338427 PHKA1P46020 1223 aa16.67■□□□□ 0.26
NUDCD3-201ENST00000338427 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
NUDCD3-201ENST00000338427 TBC1D22AQ8WUA7 517 aa16.67■□□□□ 0.26
NUDCD3-201ENST00000338427 ELP3Q9H9T3 547 aa16.67■□□□□ 0.26
NUDCD3-201ENST00000338427 GPR25O00155 361 aa16.66■□□□□ 0.26
NUDCD3-201ENST00000338427 TRIM27P14373 513 aa16.66■□□□□ 0.26
NUDCD3-201ENST00000338427 HDLBPQ00341 1268 aaKnown RBP16.66■□□□□ 0.26
NUDCD3-201ENST00000338427 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
NUDCD3-201ENST00000338427 ARHGAP45Q92619 1136 aa16.66■□□□□ 0.26
NUDCD3-201ENST00000338427 TEKT1Q969V4 418 aa16.66■□□□□ 0.26
NUDCD3-201ENST00000338427 COPRSQ9NQ92 184 aa16.66■□□□□ 0.26
NUDCD3-201ENST00000338427 IGF2BP3O00425 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
NUDCD3-201ENST00000338427 CIAO1O76071 339 aa16.65■□□□□ 0.26
NUDCD3-201ENST00000338427 IL15P40933 162 aaPredicted RBP16.65■□□□□ 0.26
NUDCD3-201ENST00000338427 IREB2P48200 963 aaKnown RBP16.65■□□□□ 0.26
NUDCD3-201ENST00000338427 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
NUDCD3-201ENST00000338427 DIXDC1Q155Q3 683 aa16.65■□□□□ 0.26
NUDCD3-201ENST00000338427 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.65■□□□□ 0.26
NUDCD3-201ENST00000338427 ZDHHC15Q96MV8 337 aa16.65■□□□□ 0.26
NUDCD3-201ENST00000338427 PTPN18Q99952 460 aa16.65■□□□□ 0.26
NUDCD3-201ENST00000338427 MRIQ9BWK5 157 aa16.65■□□□□ 0.26
NUDCD3-201ENST00000338427 ECM29Q5VYK3 1845 aa16.65■□□□□ 0.26
NUDCD3-201ENST00000338427 SRGAP3O43295 1099 aa16.64■□□□□ 0.25
NUDCD3-201ENST00000338427 PRDX5P30044 214 aa16.64■□□□□ 0.25
NUDCD3-201ENST00000338427 SREBF2Q12772 1141 aa16.64■□□□□ 0.25
NUDCD3-201ENST00000338427 TFCP2Q12800 502 aa16.64■□□□□ 0.25
NUDCD3-201ENST00000338427 CTU1Q7Z7A3 348 aaKnown RBP16.64■□□□□ 0.25
NUDCD3-201ENST00000338427 IFNL1Q8IU54 200 aa16.64■□□□□ 0.25
NUDCD3-201ENST00000338427 ANKRD13AQ8IZ07 590 aa16.64■□□□□ 0.25
NUDCD3-201ENST00000338427 COL1A1P02452 1464 aaPredicted RBP16.64■□□□□ 0.25
NUDCD3-201ENST00000338427 MANSC4A6NHS7 340 aaPredicted RBP16.63■□□□□ 0.25
NUDCD3-201ENST00000338427 MAP3K9P80192 1104 aa16.63■□□□□ 0.25
NUDCD3-201ENST00000338427 TNFAIP1Q13829 316 aa16.63■□□□□ 0.25
NUDCD3-201ENST00000338427 ATF7IPQ6VMQ6 1270 aa16.63■□□□□ 0.25
NUDCD3-201ENST00000338427 MIGA2Q7L4E1 593 aa16.63■□□□□ 0.25
NUDCD3-201ENST00000338427 TMEM57Q8N5G2 664 aa16.63■□□□□ 0.25
NUDCD3-201ENST00000338427 WDR66Q8TBY9 1149 aa16.63■□□□□ 0.25
NUDCD3-201ENST00000338427 OPTNQ96CV9 577 aa16.63■□□□□ 0.25
NUDCD3-201ENST00000338427 FBXO3Q9UK99 471 aa16.63■□□□□ 0.25
NUDCD3-201ENST00000338427 KIF16BQ96L93 1317 aa16.63■□□□□ 0.25
NUDCD3-201ENST00000338427 PNMA6EA0A0J9YXQ4 647 aa16.62■□□□□ 0.25
NUDCD3-201ENST00000338427 IPO8O15397 1037 aaKnown RBP16.62■□□□□ 0.25
NUDCD3-201ENST00000338427 GNAI3P08754 354 aa16.62■□□□□ 0.25
NUDCD3-201ENST00000338427 TNNI2P48788 182 aa16.62■□□□□ 0.25
NUDCD3-201ENST00000338427 SOX10P56693 466 aa16.62■□□□□ 0.25
NUDCD3-201ENST00000338427 TCP10Q12799 353 aa16.62■□□□□ 0.25
NUDCD3-201ENST00000338427 CCDC102BQ68D86 513 aa16.62■□□□□ 0.25
NUDCD3-201ENST00000338427 CDC42EP5Q6NZY7 148 aa16.62■□□□□ 0.25
NUDCD3-201ENST00000338427 HHIPL2Q6UWX4 724 aa16.62■□□□□ 0.25
NUDCD3-201ENST00000338427 ZFPM1Q8IX07 1006 aa16.62■□□□□ 0.25
NUDCD3-201ENST00000338427 DAGLAQ9Y4D2 1042 aa16.62■□□□□ 0.25
NUDCD3-201ENST00000338427 ZBTB48P10074 688 aaPredicted RBP16.61■□□□□ 0.25
NUDCD3-201ENST00000338427 RGS19P49795 217 aa16.61■□□□□ 0.25
NUDCD3-201ENST00000338427 NFIAQ12857 509 aa16.61■□□□□ 0.25
NUDCD3-201ENST00000338427 ZKSCAN4Q969J2 545 aaPredicted RBP16.61■□□□□ 0.25
NUDCD3-201ENST00000338427 XAGE2Q96GT9 111 aa16.61■□□□□ 0.25
NUDCD3-201ENST00000338427 NEUROD6Q96NK8 337 aa16.61■□□□□ 0.25
NUDCD3-201ENST00000338427 HDAC5Q9UQL6 1122 aa16.61■□□□□ 0.25
NUDCD3-201ENST00000338427 FKTNO75072 461 aa16.6■□□□□ 0.25
NUDCD3-201ENST00000338427 SLURP2P0DP57 97 aa16.6■□□□□ 0.25
NUDCD3-201ENST00000338427 INHBEP58166 350 aa16.6■□□□□ 0.25
NUDCD3-201ENST00000338427 CAP1Q01518 475 aa16.6■□□□□ 0.25
NUDCD3-201ENST00000338427 VGLL4Q14135 290 aa16.6■□□□□ 0.25
NUDCD3-201ENST00000338427 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.6■□□□□ 0.25
NUDCD3-201ENST00000338427 MS4A4AQ96JQ5 239 aa16.6■□□□□ 0.25
NUDCD3-201ENST00000338427 USP40Q9NVE5 1235 aa16.6■□□□□ 0.25
NUDCD3-201ENST00000338427 GNL3LQ9NVN8 582 aaKnown RBP16.6■□□□□ 0.25
NUDCD3-201ENST00000338427 SUGT1Q9Y2Z0 365 aa16.6■□□□□ 0.25
NUDCD3-201ENST00000338427 A0A1B0GUL7 405 aa16.59■□□□□ 0.25
NUDCD3-201ENST00000338427 UNCXA6NJT0 531 aa16.59■□□□□ 0.25
NUDCD3-201ENST00000338427 GNAI2P04899 355 aa16.59■□□□□ 0.25
NUDCD3-201ENST00000338427 LDHBP07195 334 aaKnown RBP16.59■□□□□ 0.25
NUDCD3-201ENST00000338427 C1orf115Q9H7X2 142 aa16.59■□□□□ 0.25
NUDCD3-201ENST00000338427 DENND2AQ9ULE3 1009 aa16.59■□□□□ 0.25
NUDCD3-201ENST00000338427 HPS5Q9UPZ3 1129 aa16.59■□□□□ 0.25
NUDCD3-201ENST00000338427 MLLT1Q03111 559 aaPredicted RBP16.58■□□□□ 0.24
NUDCD3-201ENST00000338427 CRHR2Q13324 411 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms