RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 C1orf167Q5SNV9 1468 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 TNNT1P13805 278 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 GNAQP50148 359 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 CCDC12Q8WUD4 166 aaPredicted RBP7.24□□□□□ -1.25
PRKDC-202ENST00000338368 KIDINS220Q9ULH0 1771 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 WDHD1O75717 1129 aaPredicted RBP7.24□□□□□ -1.25
PRKDC-202ENST00000338368 PTPN14Q15678 1187 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 TCP11L1Q9NUJ3 509 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 ADCY9O60503 1353 aa7.24□□□□□ -1.25
PRKDC-202ENST00000338368 UBE3CQ15386 1083 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 ZNF76P36508 570 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 TANGO6Q9C0B7 1094 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 CD163L1Q9NR16 1453 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 ZSCAN12O43309 604 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 CCDC178Q5BJE1 867 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 NOLC1Q14978 699 aaKnown RBP eCLIP7.23□□□□□ -1.25
PRKDC-202ENST00000338368 CNBD1Q8NA66 436 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 NBPF26B4DH59 902 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 NBPF14Q5TI25 921 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 NBPF10Q6P3W6 841 aaKnown RBP7.23□□□□□ -1.25
PRKDC-202ENST00000338368 LUZP1Q86V48 1076 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 IFNL3Q8IZI9 196 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 NBPF15Q8N660 670 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 CPLX3Q8WVH0 158 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 CLSTN2Q9H4D0 955 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 HLA-DOAP06340 250 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 CTDSPL2Q05D32 466 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 TTC6Q86TZ1 520 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 GTF3C6Q969F1 213 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 SEC31BQ9NQW1 1179 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 CRKLP46109 303 aaKnown RBP7.23□□□□□ -1.25
PRKDC-202ENST00000338368 KRT40Q6A162 431 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 SPATA31D1Q6ZQQ2 1576 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 LARGE1O95461 756 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 PHKA1P46020 1223 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 CEMIPQ8WUJ3 1361 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 NAP1L1P55209 391 aaKnown RBP7.23□□□□□ -1.25
PRKDC-202ENST00000338368 TTLL11Q8NHH1 800 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 ERVV-1B6SEH8 477 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 GSDMDP57764 484 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 CHRNDQ07001 517 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 USP21Q9UK80 565 aa7.23□□□□□ -1.25
PRKDC-202ENST00000338368 MAST3O60307 1309 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 DEXIO95424 95 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 USPL1Q5W0Q7 1092 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 RAB34Q9BZG1 259 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 PATL2C9JE40 543 aaKnown RBP7.22□□□□□ -1.25
PRKDC-202ENST00000338368 RIMBP2O15034 1052 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 AKNAD1Q5T1N1 836 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 CABP5Q9NP86 173 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 AFMP43652 599 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 OSBP2Q969R2 916 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 KIF2CQ99661 725 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 PDIA3P30101 505 aaKnown RBP7.22□□□□□ -1.25
PRKDC-202ENST00000338368 GYG1P46976 350 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 NOC3LQ8WTT2 800 aaKnown RBP7.22□□□□□ -1.25
PRKDC-202ENST00000338368 ADORA1P30542 326 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 EPS15P42566 896 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 TMC6Q7Z403 805 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 CCDC148Q8NFR7 591 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 DNAJC5Q9H3Z4 198 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 BCAMP50895 628 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 FAM160A1Q05DH4 1040 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 PYM1Q9BRP8 204 aaKnown RBP7.22□□□□□ -1.25
PRKDC-202ENST00000338368 V9GY48 417 aaPredicted RBP7.22□□□□□ -1.25
PRKDC-202ENST00000338368 USP17L12C9JPN9 530 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 USP17L21D6R901 530 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 PI16Q6UXB8 463 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 ADD1P35611 737 aaKnown RBP7.22□□□□□ -1.25
PRKDC-202ENST00000338368 EIF5P55010 431 aaKnown RBP7.22□□□□□ -1.25
PRKDC-202ENST00000338368 HLFQ16534 295 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 RILPL1Q5EBL4 403 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 HEATR3Q7Z4Q2 680 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 CDC42BPGQ6DT37 1551 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 MYSM1Q5VVJ2 828 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 TEX11Q8IYF3 940 aa7.22□□□□□ -1.25
PRKDC-202ENST00000338368 RTL9Q8NET4 1388 aa7.21□□□□□ -1.25
PRKDC-202ENST00000338368 GPT2Q8TD30 523 aa7.21□□□□□ -1.25
PRKDC-202ENST00000338368 C16orf45Q96MC5 204 aaPredicted RBP7.21□□□□□ -1.25
PRKDC-202ENST00000338368 ISCA1Q9BUE6 129 aa7.21□□□□□ -1.25
PRKDC-202ENST00000338368 TRMT1Q9NXH9 659 aaKnown RBP7.21□□□□□ -1.25
PRKDC-202ENST00000338368 PUS7LQ9H0K6 701 aaKnown RBP7.21□□□□□ -1.25
PRKDC-202ENST00000338368 TMEM266Q2M3C6 531 aa7.21□□□□□ -1.25
PRKDC-202ENST00000338368 PHKBQ93100 1093 aa7.21□□□□□ -1.25
PRKDC-202ENST00000338368 WWC3Q9ULE0 1092 aa7.21□□□□□ -1.25
PRKDC-202ENST00000338368 LMOD1P29536 600 aaPredicted RBP7.21□□□□□ -1.26
PRKDC-202ENST00000338368 AMPD3Q01432 767 aa7.21□□□□□ -1.26
PRKDC-202ENST00000338368 ATP10DQ9P241 1426 aa7.21□□□□□ -1.26
PRKDC-202ENST00000338368 KIF2AO00139 706 aaPredicted RBP7.21□□□□□ -1.26
PRKDC-202ENST00000338368 IDEP14735 1019 aa7.21□□□□□ -1.26
PRKDC-202ENST00000338368 RBM28Q9NW13 759 aaKnown RBP7.21□□□□□ -1.26
PRKDC-202ENST00000338368 SUSD4Q5VX71 490 aa7.21□□□□□ -1.26
PRKDC-202ENST00000338368 ANO1Q5XXA6 986 aa7.21□□□□□ -1.26
PRKDC-202ENST00000338368 USP28Q96RU2 1077 aa7.21□□□□□ -1.26
PRKDC-202ENST00000338368 YEATS4O95619 227 aa7.21□□□□□ -1.26
PRKDC-202ENST00000338368 UBASH3AP57075 661 aa7.21□□□□□ -1.26
PRKDC-202ENST00000338368 AATFQ9NY61 560 aaKnown RBP eCLIP7.21□□□□□ -1.267e-6■■■□□ 14.6
PRKDC-202ENST00000338368 PLCG2P16885 1265 aa7.21□□□□□ -1.26
PRKDC-202ENST00000338368 LIG1P18858 919 aa7.21□□□□□ -1.26
PRKDC-202ENST00000338368 RRAGDQ9NQL2 400 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 555.5 ms