RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 H7C1D1 291 aa17.11■□□□□ 0.33
APOBEC3B-202ENST00000335760 EPS15P42566 896 aa17.11■□□□□ 0.33
APOBEC3B-202ENST00000335760 DZIP1Q86YF9 867 aaKnown RBP17.11■□□□□ 0.33
APOBEC3B-202ENST00000335760 RRAGCQ9HB90 399 aa17.11■□□□□ 0.33
APOBEC3B-202ENST00000335760 HACL1Q9UJ83 578 aa17.11■□□□□ 0.33
APOBEC3B-202ENST00000335760 MYO5AQ9Y4I1 1855 aaKnown RBP17.1■□□□□ 0.33
APOBEC3B-202ENST00000335760 POTECB2RU33 542 aa17.1■□□□□ 0.33
APOBEC3B-202ENST00000335760 IDH1O75874 414 aaKnown RBP17.1■□□□□ 0.33
APOBEC3B-202ENST00000335760 RGS3P49796 1198 aa17.1■□□□□ 0.33
APOBEC3B-202ENST00000335760 ZNF280AP59817 542 aaPredicted RBP17.1■□□□□ 0.33
APOBEC3B-202ENST00000335760 MAST3O60307 1309 aa17.1■□□□□ 0.33
APOBEC3B-202ENST00000335760 IQCA1LA6NCM1 817 aa17.09■□□□□ 0.33
APOBEC3B-202ENST00000335760 MECOMQ03112 1051 aa17.09■□□□□ 0.33
APOBEC3B-202ENST00000335760 SCN4AP35499 1836 aa17.09■□□□□ 0.33
APOBEC3B-202ENST00000335760 DOCK2Q92608 1830 aa17.08■□□□□ 0.33
APOBEC3B-202ENST00000335760 TRIM6-TRIM34B2RNG4 842 aa17.08■□□□□ 0.32
APOBEC3B-202ENST00000335760 VEGFAP15692 232 aaPredicted RBP17.08■□□□□ 0.32
APOBEC3B-202ENST00000335760 MMP14P50281 582 aa17.08■□□□□ 0.32
APOBEC3B-202ENST00000335760 MAP3K12Q12852 859 aa17.08■□□□□ 0.32
APOBEC3B-202ENST00000335760 TBC1D10BQ4KMP7 808 aaPredicted RBP17.08■□□□□ 0.32
APOBEC3B-202ENST00000335760 RBM26Q5T8P6 1007 aaKnown RBP17.08■□□□□ 0.32
APOBEC3B-202ENST00000335760 TTC22Q5TAA0 569 aa17.08■□□□□ 0.32
APOBEC3B-202ENST00000335760 SAMD7Q7Z3H4 446 aa17.08■□□□□ 0.32
APOBEC3B-202ENST00000335760 NSUN4Q96CB9 384 aaKnown RBP17.08■□□□□ 0.32
APOBEC3B-202ENST00000335760 MYOZ2Q9NPC6 264 aa17.08■□□□□ 0.32
APOBEC3B-202ENST00000335760 NMRK2Q9NPI5 230 aa17.08■□□□□ 0.32
APOBEC3B-202ENST00000335760 ADARB2Q9NS39 739 aaKnown RBP17.08■□□□□ 0.32
APOBEC3B-202ENST00000335760 EPHX2P34913 555 aa17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 CRKP46108 304 aa17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 RBM5P52756 815 aaKnown RBP eCLIP17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 GSTO1P78417 241 aa17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 DIXDC1Q155Q3 683 aa17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 CFAP100Q494V2 611 aa17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 NAA16Q6N069 864 aaPredicted RBP17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 KBTBD3Q8NAB2 608 aa17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 ZNF384Q8TF68 577 aa17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 TEKT1Q969V4 418 aa17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 RILPL2Q969X0 211 aa17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 MRIQ9BWK5 157 aa17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 TAF1DQ9H5J8 278 aaPredicted RBP17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 GPBP1L1Q9HC44 474 aaPredicted RBP17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 SERPINA10Q9UK55 444 aa17.07■□□□□ 0.32
APOBEC3B-202ENST00000335760 MAST2Q6P0Q8 1798 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 ADAMTSL1Q8N6G6 1762 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 IGSF3O75054 1194 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 EGFRP00533 1210 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 HDLBPQ00341 1268 aaKnown RBP17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 DLGAP5Q15398 846 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 KIF4BQ2VIQ3 1234 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 SLF2Q8IX21 1173 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 CNTROBQ8N137 903 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 MAGEB6Q8N7X4 407 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 TRPM4Q8TD43 1214 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 EVI5LQ96CN4 794 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 FSD1Q9BTV5 496 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 PCDHAC2Q9Y5I4 1007 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 MYH2Q9UKX2 1941 aa17.06■□□□□ 0.32
APOBEC3B-202ENST00000335760 GSPT1P15170 499 aaKnown RBP17.05■□□□□ 0.32
APOBEC3B-202ENST00000335760 SLC9C2Q5TAH2 1124 aa17.05■□□□□ 0.32
APOBEC3B-202ENST00000335760 HHIPL2Q6UWX4 724 aa17.05■□□□□ 0.32
APOBEC3B-202ENST00000335760 LDHCP07864 332 aa17.04■□□□□ 0.32
APOBEC3B-202ENST00000335760 PDE6AP16499 860 aa17.04■□□□□ 0.32
APOBEC3B-202ENST00000335760 CYP7A1P22680 504 aa17.04■□□□□ 0.32
APOBEC3B-202ENST00000335760 ZSCAN25Q6NSZ9 544 aa17.04■□□□□ 0.32
APOBEC3B-202ENST00000335760 USP50Q70EL3 339 aaPredicted RBP17.04■□□□□ 0.32
APOBEC3B-202ENST00000335760 MTMR14Q8NCE2 650 aa17.04■□□□□ 0.32
APOBEC3B-202ENST00000335760 ZDHHC15Q96MV8 337 aa17.04■□□□□ 0.32
APOBEC3B-202ENST00000335760 DAGLAQ9Y4D2 1042 aa17.04■□□□□ 0.32
APOBEC3B-202ENST00000335760 MROH7-TTC4A0A0A0MT08 1334 aa17.04■□□□□ 0.32
APOBEC3B-202ENST00000335760 MYH7P12883 1935 aa17.04■□□□□ 0.32
APOBEC3B-202ENST00000335760 SDSP20132 328 aa17.03■□□□□ 0.32
APOBEC3B-202ENST00000335760 ADD2P35612 726 aa17.03■□□□□ 0.32
APOBEC3B-202ENST00000335760 HIRAP54198 1017 aaPredicted RBP17.03■□□□□ 0.32
APOBEC3B-202ENST00000335760 EAPPQ56P03 285 aaPredicted RBP17.03■□□□□ 0.32
APOBEC3B-202ENST00000335760 PNMA8AQ86V59 439 aaPredicted RBP17.03■□□□□ 0.32
APOBEC3B-202ENST00000335760 ZNF784Q8NCA9 323 aaPredicted RBP17.03■□□□□ 0.32
APOBEC3B-202ENST00000335760 FAM163AQ96GL9 167 aaPredicted RBP17.03■□□□□ 0.32
APOBEC3B-202ENST00000335760 PRMT6Q96LA8 375 aaPredicted RBP17.03■□□□□ 0.32
APOBEC3B-202ENST00000335760 GAKO14976 1311 aa17.03■□□□□ 0.32
APOBEC3B-202ENST00000335760 SPDYE2BA6NHP3 402 aa17.02■□□□□ 0.32
APOBEC3B-202ENST00000335760 RNF113AO15541 343 aaKnown RBP17.02■□□□□ 0.32
APOBEC3B-202ENST00000335760 CHGBP05060 677 aa17.02■□□□□ 0.32
APOBEC3B-202ENST00000335760 SPDYE6P0CI01 402 aa17.02■□□□□ 0.32
APOBEC3B-202ENST00000335760 LRRFIP1Q32MZ4 808 aaKnown RBP17.02■□□□□ 0.32
APOBEC3B-202ENST00000335760 NBPF9Q3BBW0 867 aa17.02■□□□□ 0.32
APOBEC3B-202ENST00000335760 SLFNL1Q499Z3 407 aa17.02■□□□□ 0.32
APOBEC3B-202ENST00000335760 AK9Q5TCS8 1911 aa17.02■□□□□ 0.32
APOBEC3B-202ENST00000335760 ADGRA1Q86SQ6 560 aa17.02■□□□□ 0.32
APOBEC3B-202ENST00000335760 ZBED3Q96IU2 234 aaPredicted RBP17.02■□□□□ 0.32
APOBEC3B-202ENST00000335760 ZNF532Q9HCE3 1301 aa17.02■□□□□ 0.32
APOBEC3B-202ENST00000335760 TCRBV5S4A2TA0A5A2 114 aa17.02■□□□□ 0.31
APOBEC3B-202ENST00000335760 WNT10BO00744 389 aa17.02■□□□□ 0.31
APOBEC3B-202ENST00000335760 ZFYP08048 801 aaPredicted RBP17.02■□□□□ 0.31
APOBEC3B-202ENST00000335760 APOBEC3HQ6NTF7 200 aaKnown RBP17.02■□□□□ 0.31
APOBEC3B-202ENST00000335760 TMED8Q6PL24 325 aaPredicted RBP17.02■□□□□ 0.31
APOBEC3B-202ENST00000335760 ASTN2O75129 1339 aaPredicted RBP17.01■□□□□ 0.31
APOBEC3B-202ENST00000335760 GPR75-ASB3A0A0A6YYF3 556 aa17.01■□□□□ 0.31
APOBEC3B-202ENST00000335760 BTDP43251 543 aa17.01■□□□□ 0.31
APOBEC3B-202ENST00000335760 UBE3CQ15386 1083 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms