RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SPECC1Q5M775 1068 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 LPIN2Q92539 896 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 MADDQ8WXG6 1647 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 GOLGA6L10A6NI86 522 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 CALM1P0DP23 149 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 CALM2P0DP24 149 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 CALM3P0DP25 149 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 TMCO3Q6UWJ1 677 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 VEZTQ9HBM0 779 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 CHAMP1Q96JM3 812 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 EHMT1Q9H9B1 1298 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 ZNF853P0CG23 659 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 PTGS1P23219 599 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 GNAQP50148 359 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 CTSWP56202 376 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 EIF6P56537 245 aaKnown RBP14.86□□□□□ -0.03
VSTM4-202ENST00000332853 CCDC150Q8NCX0 1101 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 PRDM10Q9NQV6 1147 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 BRAPQ7Z569 592 aa14.85□□□□□ -0.03
VSTM4-202ENST00000332853 RRP36Q96EU6 259 aaKnown RBP14.85□□□□□ -0.03
VSTM4-202ENST00000332853 RBM17Q96I25 401 aaKnown RBP14.85□□□□□ -0.03
VSTM4-202ENST00000332853 PYM1Q9BRP8 204 aaKnown RBP14.85□□□□□ -0.03
VSTM4-202ENST00000332853 SETD1BQ9UPS6 1966 aaKnown RBP14.85□□□□□ -0.03
VSTM4-202ENST00000332853 E7EWF7 191 aa14.85□□□□□ -0.03
VSTM4-202ENST00000332853 EIF3JO75822 258 aaKnown RBP14.85□□□□□ -0.03
VSTM4-202ENST00000332853 ABCA6Q8N139 1617 aa14.85□□□□□ -0.03
VSTM4-202ENST00000332853 ERICH4A6NGS2 130 aa14.85□□□□□ -0.03
VSTM4-202ENST00000332853 RBM26Q5T8P6 1007 aaKnown RBP14.85□□□□□ -0.03
VSTM4-202ENST00000332853 CDCA7Q9BWT1 371 aaPredicted RBP14.85□□□□□ -0.03
VSTM4-202ENST00000332853 MYO1BO43795 1136 aa14.85□□□□□ -0.03
VSTM4-202ENST00000332853 TAF3Q5VWG9 929 aa14.85□□□□□ -0.03
VSTM4-202ENST00000332853 SIRT2Q8IXJ6 389 aa14.85□□□□□ -0.03
VSTM4-202ENST00000332853 ASAP1Q9ULH1 1129 aa14.85□□□□□ -0.03
VSTM4-202ENST00000332853 RMND1Q9NWS8 449 aa14.84□□□□□ -0.03
VSTM4-202ENST00000332853 ANGEL1Q9UNK9 670 aaKnown RBP14.84□□□□□ -0.03
VSTM4-202ENST00000332853 CDK12Q9NYV4 1490 aaPredicted RBP14.84□□□□□ -0.03
VSTM4-202ENST00000332853 TNNI2P48788 182 aa14.84□□□□□ -0.03
VSTM4-202ENST00000332853 ASIC1P78348 528 aa14.84□□□□□ -0.03
VSTM4-202ENST00000332853 GNG11P61952 73 aa14.84□□□□□ -0.03
VSTM4-202ENST00000332853 hCG_1642624A0A1W2PR95 340 aa14.84□□□□□ -0.03
VSTM4-202ENST00000332853 VWA3AA6NCI4 1184 aa14.84□□□□□ -0.03
VSTM4-202ENST00000332853 BMP15O95972 392 aa14.84□□□□□ -0.03
VSTM4-202ENST00000332853 RDXP35241 583 aaKnown RBP14.84□□□□□ -0.03
VSTM4-202ENST00000332853 TEX11Q8IYF3 940 aa14.84□□□□□ -0.03
VSTM4-202ENST00000332853 C6orf50Q9HD87 102 aa14.84□□□□□ -0.03
VSTM4-202ENST00000332853 LMBRD1Q9NUN5 540 aa14.84□□□□□ -0.03
VSTM4-202ENST00000332853 SYCP3Q8IZU3 236 aa14.83□□□□□ -0.03
VSTM4-202ENST00000332853 IFNKQ9P0W0 207 aa14.83□□□□□ -0.03
VSTM4-202ENST00000332853 ALKQ9UM73 1620 aa14.83□□□□□ -0.03
VSTM4-202ENST00000332853 SCLT1Q96NL6 688 aa14.83□□□□□ -0.04
VSTM4-202ENST00000332853 PUS3Q9BZE2 481 aaKnown RBP14.83□□□□□ -0.04
VSTM4-202ENST00000332853 CWC15Q9P013 229 aaKnown RBP14.83□□□□□ -0.04
VSTM4-202ENST00000332853 A2ML1A8K2U0 1454 aa14.83□□□□□ -0.04
VSTM4-202ENST00000332853 TRIM21P19474 475 aaKnown RBP14.83□□□□□ -0.04
VSTM4-202ENST00000332853 USP8P40818 1118 aa14.83□□□□□ -0.04
VSTM4-202ENST00000332853 USO1O60763 962 aaKnown RBP14.83□□□□□ -0.04
VSTM4-202ENST00000332853 FAM114A1Q8IWE2 563 aa14.83□□□□□ -0.04
VSTM4-202ENST00000332853 ZKSCAN5Q9Y2L8 839 aa14.83□□□□□ -0.04
VSTM4-202ENST00000332853 KIF20AO95235 890 aa14.82□□□□□ -0.04
VSTM4-202ENST00000332853 V9GY48 417 aaPredicted RBP14.82□□□□□ -0.04
VSTM4-202ENST00000332853 MROH5Q6ZUA9 1318 aa14.82□□□□□ -0.04
VSTM4-202ENST00000332853 RRP9O43818 475 aaKnown RBP14.82□□□□□ -0.04
VSTM4-202ENST00000332853 H0YHG0 523 aa14.82□□□□□ -0.04
VSTM4-202ENST00000332853 CD2BP2O95400 341 aaKnown RBP14.82□□□□□ -0.04
VSTM4-202ENST00000332853 OGFOD1Q8N543 542 aa14.82□□□□□ -0.04
VSTM4-202ENST00000332853 TMEM87BQ96K49 555 aa14.82□□□□□ -0.04
VSTM4-202ENST00000332853 GPCPD1Q9NPB8 672 aa14.82□□□□□ -0.04
VSTM4-202ENST00000332853 KRI1Q8N9T8 703 aaKnown RBP14.82□□□□□ -0.04
VSTM4-202ENST00000332853 JAKMIP3Q5VZ66 844 aa14.82□□□□□ -0.04
VSTM4-202ENST00000332853 RBM28Q9NW13 759 aaKnown RBP14.82□□□□□ -0.04
VSTM4-202ENST00000332853 CALML3P27482 149 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 CMTR1Q8N1G2 835 aaKnown RBP14.81□□□□□ -0.04
VSTM4-202ENST00000332853 LEO1Q8WVC0 666 aaPredicted RBP14.81□□□□□ -0.04
VSTM4-202ENST00000332853 HDAC9Q9UKV0 1011 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 TPCN1Q9ULQ1 816 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 ADORA1P30542 326 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 ANO1Q5XXA6 986 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 SMARCC2Q8TAQ2 1214 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 USP21Q9UK80 565 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.81□□□□□ -0.04
VSTM4-202ENST00000332853 SPDYE4A6NLX3 237 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 PARP1P09874 1014 aaKnown RBP14.81□□□□□ -0.04
VSTM4-202ENST00000332853 PLCG2P16885 1265 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 PIK3AP1Q6ZUJ8 805 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 CLCN1P35523 988 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 TAX1BP1Q86VP1 789 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 ZBTB38Q8NAP3 1195 aaPredicted RBP14.81□□□□□ -0.04
VSTM4-202ENST00000332853 GREM2Q9H772 168 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 KCNJ14Q9UNX9 436 aa14.81□□□□□ -0.04
VSTM4-202ENST00000332853 TBCAO75347 108 aaKnown RBP14.8□□□□□ -0.04
VSTM4-202ENST00000332853 VPS36Q86VN1 386 aa14.8□□□□□ -0.04
VSTM4-202ENST00000332853 LLPHQ9BRT6 129 aaKnown RBP14.8□□□□□ -0.04
VSTM4-202ENST00000332853 BCAMP50895 628 aa14.8□□□□□ -0.04
VSTM4-202ENST00000332853 FAM160A1Q05DH4 1040 aa14.8□□□□□ -0.04
VSTM4-202ENST00000332853 PPP4R3AQ6IN85 833 aa14.8□□□□□ -0.04
VSTM4-202ENST00000332853 TSPYL1Q9H0U9 437 aa14.8□□□□□ -0.04
VSTM4-202ENST00000332853 LETM2Q2VYF4 491 aa14.8□□□□□ -0.04
VSTM4-202ENST00000332853 DNAI1Q9UI46 699 aa14.8□□□□□ -0.04
VSTM4-202ENST00000332853 GYG1P46976 350 aa14.8□□□□□ -0.04
VSTM4-202ENST00000332853 GGA1Q9UJY5 639 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms