RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 DEFB118Q96PH6 123 aa19.23■□□□□ 0.67
CTHRC1-201ENST00000330295 PLEKHF1Q96S99 279 aa19.23■□□□□ 0.67
CTHRC1-201ENST00000330295 RAPGEFL1Q9UHV5 662 aa19.23■□□□□ 0.67
CTHRC1-201ENST00000330295 LEMD3Q9Y2U8 911 aa19.23■□□□□ 0.67
CTHRC1-201ENST00000330295 F8W031 263 aaPredicted RBP19.22■□□□□ 0.67
CTHRC1-201ENST00000330295 POTEB2H3BUK9 544 aa19.22■□□□□ 0.67
CTHRC1-201ENST00000330295 SYN1P17600 705 aa19.22■□□□□ 0.67
CTHRC1-201ENST00000330295 KLRK1P26718 216 aa19.22■□□□□ 0.67
CTHRC1-201ENST00000330295 TNFAIP1Q13829 316 aa19.22■□□□□ 0.67
CTHRC1-201ENST00000330295 UBE2OQ9C0C9 1292 aaKnown RBP19.22■□□□□ 0.67
CTHRC1-201ENST00000330295 EYSQ5T1H1 3165 aa19.22■□□□□ 0.67
CTHRC1-201ENST00000330295 PCCAP05165 728 aaPredicted RBP19.21■□□□□ 0.67
CTHRC1-201ENST00000330295 SNAPC2Q13487 334 aa19.21■□□□□ 0.67
CTHRC1-201ENST00000330295 CDAN1Q8IWY9 1227 aa19.21■□□□□ 0.67
CTHRC1-201ENST00000330295 TEPSINQ96N21 525 aa19.21■□□□□ 0.67
CTHRC1-201ENST00000330295 ADGRA2Q96PE1 1338 aa19.21■□□□□ 0.67
CTHRC1-201ENST00000330295 KCNA4P22459 653 aa19.2■□□□□ 0.66
CTHRC1-201ENST00000330295 PPP2R1AP30153 589 aa19.2■□□□□ 0.66
CTHRC1-201ENST00000330295 KRT24Q2M2I5 525 aa19.2■□□□□ 0.66
CTHRC1-201ENST00000330295 DIS3LQ8TF46 1054 aaKnown RBP19.2■□□□□ 0.66
CTHRC1-201ENST00000330295 SYMPKQ92797 1274 aaKnown RBP19.2■□□□□ 0.66
CTHRC1-201ENST00000330295 CRISPLD2Q9H0B8 497 aa19.2■□□□□ 0.66
CTHRC1-201ENST00000330295 MUC3AQ02505 3323 aa19.2■□□□□ 0.66
CTHRC1-201ENST00000330295 IRF6O14896 467 aa19.19■□□□□ 0.66
CTHRC1-201ENST00000330295 ADCY3O60266 1144 aa19.19■□□□□ 0.66
CTHRC1-201ENST00000330295 ERO1BQ86YB8 467 aa19.19■□□□□ 0.66
CTHRC1-201ENST00000330295 JARID2Q92833 1246 aaPredicted RBP19.19■□□□□ 0.66
CTHRC1-201ENST00000330295 FAM161BQ96MY7 647 aa19.19■□□□□ 0.66
CTHRC1-201ENST00000330295 CD209Q9NNX6 404 aa19.19■□□□□ 0.66
CTHRC1-201ENST00000330295 PAK6Q9NQU5 681 aaPredicted RBP19.19■□□□□ 0.66
CTHRC1-201ENST00000330295 MGAMO43451 1857 aa19.19■□□□□ 0.66
CTHRC1-201ENST00000330295 FAM205AQ6ZU69 1335 aa19.19■□□□□ 0.66
CTHRC1-201ENST00000330295 INHAP05111 366 aa19.18■□□□□ 0.66
CTHRC1-201ENST00000330295 RBM5P52756 815 aaKnown RBP eCLIP19.18■□□□□ 0.66
CTHRC1-201ENST00000330295 FCGRTP55899 365 aa19.18■□□□□ 0.66
CTHRC1-201ENST00000330295 HDGFL1Q5TGJ6 251 aa19.18■□□□□ 0.66
CTHRC1-201ENST00000330295 FAM122AQ96E09 287 aa19.18■□□□□ 0.66
CTHRC1-201ENST00000330295 DBF4Q9UBU7 674 aaPredicted RBP19.18■□□□□ 0.66
CTHRC1-201ENST00000330295 GABRQQ9UN88 632 aa19.18■□□□□ 0.66
CTHRC1-201ENST00000330295 SNCAIPQ9Y6H5 919 aa19.18■□□□□ 0.66
CTHRC1-201ENST00000330295 ARAP2Q8WZ64 1704 aa19.17■□□□□ 0.66
CTHRC1-201ENST00000330295 SPDYE2Q495Y8 402 aa19.17■□□□□ 0.66
CTHRC1-201ENST00000330295 RIC3Q7Z5B4 369 aa19.17■□□□□ 0.66
CTHRC1-201ENST00000330295 CCDC191Q8NCU4 936 aa19.17■□□□□ 0.66
CTHRC1-201ENST00000330295 MAFAQ8NHW3 353 aaPredicted RBP19.17■□□□□ 0.66
CTHRC1-201ENST00000330295 PRUNE2Q8WUY3 3088 aa19.16■□□□□ 0.66
CTHRC1-201ENST00000330295 ELNP15502 786 aa19.16■□□□□ 0.66
CTHRC1-201ENST00000330295 CTSWP56202 376 aa19.16■□□□□ 0.66
CTHRC1-201ENST00000330295 PPIL2Q13356 520 aa19.16■□□□□ 0.66
CTHRC1-201ENST00000330295 HYPKQ9NX55 129 aa19.16■□□□□ 0.66
CTHRC1-201ENST00000330295 ZNF70Q9UC06 446 aaPredicted RBP19.16■□□□□ 0.66
CTHRC1-201ENST00000330295 PDHXO00330 501 aa19.15■□□□□ 0.66
CTHRC1-201ENST00000330295 ANKRD23Q86SG2 305 aa19.15■□□□□ 0.66
CTHRC1-201ENST00000330295 ANKLE1Q8NAG6 615 aa19.15■□□□□ 0.66
CTHRC1-201ENST00000330295 PXYLP1Q8TE99 480 aa19.15■□□□□ 0.66
CTHRC1-201ENST00000330295 MYD88Q99836 296 aa19.15■□□□□ 0.66
CTHRC1-201ENST00000330295 TMEM39BQ9GZU3 492 aa19.15■□□□□ 0.66
CTHRC1-201ENST00000330295 GREM2Q9H772 168 aa19.15■□□□□ 0.66
CTHRC1-201ENST00000330295 MAPK8IP3Q9UPT6 1336 aa19.15■□□□□ 0.66
CTHRC1-201ENST00000330295 COL2A1P02458 1487 aaPredicted RBP19.15■□□□□ 0.66
CTHRC1-201ENST00000330295 FLT3LGP49771 235 aa19.14■□□□□ 0.65
CTHRC1-201ENST00000330295 TTLL11Q8NHH1 800 aa19.14■□□□□ 0.65
CTHRC1-201ENST00000330295 CWC25Q9NXE8 425 aaPredicted RBP19.14■□□□□ 0.65
CTHRC1-201ENST00000330295 MYH3P11055 1940 aa19.13■□□□□ 0.65
CTHRC1-201ENST00000330295 FKBP1AP62942 108 aaKnown RBP19.13■□□□□ 0.65
CTHRC1-201ENST00000330295 GOLGA2Q08379 1002 aa19.13■□□□□ 0.65
CTHRC1-201ENST00000330295 ZNF697Q5TEC3 545 aa19.13■□□□□ 0.65
CTHRC1-201ENST00000330295 ANKRD2Q9GZV1 360 aa19.13■□□□□ 0.65
CTHRC1-201ENST00000330295 TDRD3Q9H7E2 651 aaKnown RBP19.13■□□□□ 0.65
CTHRC1-201ENST00000330295 TCP10L2B9ZVM9 353 aa19.12■□□□□ 0.65
CTHRC1-201ENST00000330295 TNFRSF10AO00220 468 aa19.12■□□□□ 0.65
CTHRC1-201ENST00000330295 BCRP11274 1271 aa19.12■□□□□ 0.65
CTHRC1-201ENST00000330295 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.12■□□□□ 0.65
CTHRC1-201ENST00000330295 ZKSCAN4Q969J2 545 aaPredicted RBP19.12■□□□□ 0.65
CTHRC1-201ENST00000330295 WRNIP1Q96S55 665 aa19.12■□□□□ 0.65
CTHRC1-201ENST00000330295 CDX2Q99626 313 aaPredicted RBP19.12■□□□□ 0.65
CTHRC1-201ENST00000330295 NBPF3Q9H094 633 aa19.12■□□□□ 0.65
CTHRC1-201ENST00000330295 HOXB7P09629 217 aa19.11■□□□□ 0.65
CTHRC1-201ENST00000330295 IGHMBP2P38935 993 aaKnown RBP19.11■□□□□ 0.65
CTHRC1-201ENST00000330295 KCNJ4P48050 445 aa19.11■□□□□ 0.65
CTHRC1-201ENST00000330295 TNNI2P48788 182 aa19.11■□□□□ 0.65
CTHRC1-201ENST00000330295 IRF5Q13568 498 aa19.1■□□□□ 0.65
CTHRC1-201ENST00000330295 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.1■□□□□ 0.65
CTHRC1-201ENST00000330295 DDX60LQ5H9U9 1706 aaKnown RBP19.1■□□□□ 0.65
CTHRC1-201ENST00000330295 LAMA2P24043 3122 aaKnown RBP19.09■□□□□ 0.65
CTHRC1-201ENST00000330295 RIPK4P57078 832 aa19.09■□□□□ 0.65
CTHRC1-201ENST00000330295 PPATQ06203 517 aa19.09■□□□□ 0.65
CTHRC1-201ENST00000330295 PARK7Q99497 189 aaKnown RBP19.09■□□□□ 0.65
CTHRC1-201ENST00000330295 PNNQ9H307 717 aaKnown RBP19.09■□□□□ 0.65
CTHRC1-201ENST00000330295 C11orf49Q9H6J7 331 aa19.09■□□□□ 0.65
CTHRC1-201ENST00000330295 JAG2Q9Y219 1238 aa19.09■□□□□ 0.65
CTHRC1-201ENST00000330295 CHL1O00533 1208 aa19.08■□□□□ 0.64
CTHRC1-201ENST00000330295 IL1R1P14778 569 aa19.08■□□□□ 0.64
CTHRC1-201ENST00000330295 SERPINA10Q9UK55 444 aa19.08■□□□□ 0.64
CTHRC1-201ENST00000330295 TMEM265A0A087WTH1 108 aa19.07■□□□□ 0.64
CTHRC1-201ENST00000330295 MDM2Q00987 491 aaPredicted RBP19.07■□□□□ 0.64
CTHRC1-201ENST00000330295 DZIP1LQ8IYY4 767 aaKnown RBP19.07■□□□□ 0.64
CTHRC1-201ENST00000330295 CYP2C8P10632 490 aa19.06■□□□□ 0.64
CTHRC1-201ENST00000330295 MOGSQ13724 837 aa19.06■□□□□ 0.64
CTHRC1-201ENST00000330295 TJAP1Q5JTD0 557 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms