RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 SPATA5Q8NB90 893 aa20.39■□□□□ 0.85
LRRC42-201ENST00000319223 DCPSQ96C86 337 aaKnown RBP20.39■□□□□ 0.85
LRRC42-201ENST00000319223 SNRKQ9NRH2 765 aa20.39■□□□□ 0.85
LRRC42-201ENST00000319223 SALL1Q9NSC2 1324 aa20.38■□□□□ 0.85
LRRC42-201ENST00000319223 SPDYE2BA6NHP3 402 aa20.38■□□□□ 0.85
LRRC42-201ENST00000319223 UQCRFS1P1P0C7P4 283 aa20.38■□□□□ 0.85
LRRC42-201ENST00000319223 SPDYE6P0CI01 402 aa20.38■□□□□ 0.85
LRRC42-201ENST00000319223 RBM5P52756 815 aaKnown RBP eCLIP20.38■□□□□ 0.85
LRRC42-201ENST00000319223 TBC1D9Q6ZT07 1266 aa20.38■□□□□ 0.85
LRRC42-201ENST00000319223 KRT26Q7Z3Y9 468 aa20.38■□□□□ 0.85
LRRC42-201ENST00000319223 SERPINA10Q9UK55 444 aa20.38■□□□□ 0.85
LRRC42-201ENST00000319223 PDS5AQ29RF7 1337 aaKnown RBP20.38■□□□□ 0.85
LRRC42-201ENST00000319223 LRRCC1Q9C099 1032 aa20.37■□□□□ 0.85
LRRC42-201ENST00000319223 SUGT1Q9Y2Z0 365 aa20.37■□□□□ 0.85
LRRC42-201ENST00000319223 CST9Q5W186 159 aa20.36■□□□□ 0.85
LRRC42-201ENST00000319223 ABCF2Q9UG63 623 aa20.36■□□□□ 0.85
LRRC42-201ENST00000319223 CLRN2A0PK11 232 aa20.36■□□□□ 0.85
LRRC42-201ENST00000319223 LDHBP07195 334 aaKnown RBP20.36■□□□□ 0.85
LRRC42-201ENST00000319223 DIXDC1Q155Q3 683 aa20.36■□□□□ 0.85
LRRC42-201ENST00000319223 ZNF512BQ96KM6 892 aaPredicted RBP20.36■□□□□ 0.85
LRRC42-201ENST00000319223 AKAP11Q9UKA4 1901 aa20.36■□□□□ 0.85
LRRC42-201ENST00000319223 NDUFB9Q9Y6M9 179 aa20.36■□□□□ 0.85
LRRC42-201ENST00000319223 PITPNM2Q9BZ72 1349 aa20.35■□□□□ 0.85
LRRC42-201ENST00000319223 HDLBPQ00341 1268 aaKnown RBP20.35■□□□□ 0.85
LRRC42-201ENST00000319223 SULF1Q8IWU6 871 aa20.35■□□□□ 0.85
LRRC42-201ENST00000319223 TDRD3Q9H7E2 651 aaKnown RBP20.35■□□□□ 0.85
LRRC42-201ENST00000319223 IFIT2P09913 472 aaKnown RBP20.34■□□□□ 0.85
LRRC42-201ENST00000319223 ZAP70P43403 619 aa20.34■□□□□ 0.85
LRRC42-201ENST00000319223 AAMPQ13685 434 aa20.34■□□□□ 0.85
LRRC42-201ENST00000319223 PRAMEF18Q5VWM3 479 aa20.34■□□□□ 0.85
LRRC42-201ENST00000319223 TEKT1Q969V4 418 aa20.34■□□□□ 0.85
LRRC42-201ENST00000319223 MRIQ9BWK5 157 aa20.34■□□□□ 0.85
LRRC42-201ENST00000319223 CYP2E1P05181 493 aaPredicted RBP20.33■□□□□ 0.85
LRRC42-201ENST00000319223 HDAC1Q13547 482 aaPredicted RBP20.33■□□□□ 0.85
LRRC42-201ENST00000319223 ZNF384Q8TF68 577 aa20.33■□□□□ 0.85
LRRC42-201ENST00000319223 ZNF408Q9H9D4 720 aa20.33■□□□□ 0.85
LRRC42-201ENST00000319223 MAST3O60307 1309 aa20.33■□□□□ 0.84
LRRC42-201ENST00000319223 IGHDP01880 384 aa20.33■□□□□ 0.84
LRRC42-201ENST00000319223 APOBEC3HQ6NTF7 200 aaKnown RBP20.33■□□□□ 0.84
LRRC42-201ENST00000319223 ZGPATQ8N5A5 531 aaKnown RBP20.33■□□□□ 0.84
LRRC42-201ENST00000319223 ZDHHC15Q96MV8 337 aa20.33■□□□□ 0.84
LRRC42-201ENST00000319223 TMEM88BA6NKF7 163 aa20.32■□□□□ 0.84
LRRC42-201ENST00000319223 CELF2O95319 508 aaKnown RBP20.32■□□□□ 0.84
LRRC42-201ENST00000319223 HHIPL2Q6UWX4 724 aa20.32■□□□□ 0.84
LRRC42-201ENST00000319223 ZNF70Q9UC06 446 aaPredicted RBP20.32■□□□□ 0.84
LRRC42-201ENST00000319223 MECOMQ03112 1051 aa20.31■□□□□ 0.84
LRRC42-201ENST00000319223 ERICH6Q7L0X2 663 aa20.31■□□□□ 0.84
LRRC42-201ENST00000319223 CDCA5Q96FF9 252 aa20.31■□□□□ 0.84
LRRC42-201ENST00000319223 PIH1D3Q9NQM4 214 aaKnown RBP20.31■□□□□ 0.84
LRRC42-201ENST00000319223 CREBZFQ9NS37 354 aa20.31■□□□□ 0.84
LRRC42-201ENST00000319223 DAGLAQ9Y4D2 1042 aa20.31■□□□□ 0.84
LRRC42-201ENST00000319223 CEP350Q5VT06 3117 aa20.31■□□□□ 0.84
LRRC42-201ENST00000319223 ECM29Q5VYK3 1845 aa20.3■□□□□ 0.84
LRRC42-201ENST00000319223 MYO1BO43795 1136 aa20.3■□□□□ 0.84
LRRC42-201ENST00000319223 SPDYE2Q495Y8 402 aa20.3■□□□□ 0.84
LRRC42-201ENST00000319223 ANTXR1Q9H6X2 564 aa20.3■□□□□ 0.84
LRRC42-201ENST00000319223 VEZTQ9HBM0 779 aa20.3■□□□□ 0.84
LRRC42-201ENST00000319223 TRPM7Q96QT4 1865 aa20.3■□□□□ 0.84
LRRC42-201ENST00000319223 CACNB3P54284 484 aa20.3■□□□□ 0.84
LRRC42-201ENST00000319223 SPTY2D1Q68D10 685 aaPredicted RBP20.3■□□□□ 0.84
LRRC42-201ENST00000319223 DZIP1Q86YF9 867 aaKnown RBP20.3■□□□□ 0.84
LRRC42-201ENST00000319223 APOBEC3FQ8IUX4 373 aaKnown RBP20.29■□□□□ 0.84
LRRC42-201ENST00000319223 DNAJC5GQ8N7S2 189 aa20.29■□□□□ 0.84
LRRC42-201ENST00000319223 NSUN4Q96CB9 384 aaKnown RBP20.29■□□□□ 0.84
LRRC42-201ENST00000319223 RAI14Q9P0K7 980 aa20.29■□□□□ 0.84
LRRC42-201ENST00000319223 LRP2BPQ9P2M1 347 aa20.29■□□□□ 0.84
LRRC42-201ENST00000319223 MYO5AQ9Y4I1 1855 aaKnown RBP20.29■□□□□ 0.84
LRRC42-201ENST00000319223 DEFB129Q9H1M3 183 aa20.28■□□□□ 0.84
LRRC42-201ENST00000319223 TCP10L2B9ZVM9 353 aa20.27■□□□□ 0.84
LRRC42-201ENST00000319223 OTUD7AQ8TE49 926 aaPredicted RBP20.27■□□□□ 0.84
LRRC42-201ENST00000319223 BOLA2Q9H3K6 86 aa20.27■□□□□ 0.84
LRRC42-201ENST00000319223 MYH2Q9UKX2 1941 aa20.27■□□□□ 0.84
LRRC42-201ENST00000319223 GAKO14976 1311 aa20.27■□□□□ 0.84
LRRC42-201ENST00000319223 ANKRD45Q5TZF3 282 aa20.27■□□□□ 0.83
LRRC42-201ENST00000319223 TSHZ3Q63HK5 1081 aa20.27■□□□□ 0.83
LRRC42-201ENST00000319223 CDC42EP5Q6NZY7 148 aa20.27■□□□□ 0.83
LRRC42-201ENST00000319223 GCC1Q96CN9 775 aa20.27■□□□□ 0.83
LRRC42-201ENST00000319223 EDC3Q96F86 508 aaKnown RBP20.27■□□□□ 0.83
LRRC42-201ENST00000319223 FAM163AQ96GL9 167 aaPredicted RBP20.27■□□□□ 0.83
LRRC42-201ENST00000319223 RWDD1Q9H446 243 aaPredicted RBP20.27■□□□□ 0.83
LRRC42-201ENST00000319223 ATP5JP18859 108 aa20.26■□□□□ 0.83
LRRC42-201ENST00000319223 RASA3Q14644 834 aa20.26■□□□□ 0.83
LRRC42-201ENST00000319223 CDAN1Q8IWY9 1227 aa20.25■□□□□ 0.83
LRRC42-201ENST00000319223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.25■□□□□ 0.83
LRRC42-201ENST00000319223 DNAJC2Q99543 621 aaKnown RBP20.25■□□□□ 0.83
LRRC42-201ENST00000319223 MKRN1Q9UHC7 482 aaKnown RBP20.25■□□□□ 0.83
LRRC42-201ENST00000319223 ABT1Q9ULW3 272 aaKnown RBP20.25■□□□□ 0.83
LRRC42-201ENST00000319223 MROH7-TTC4A0A0A0MT08 1334 aa20.25■□□□□ 0.83
LRRC42-201ENST00000319223 MOB2Q70IA6 237 aa20.24■□□□□ 0.83
LRRC42-201ENST00000319223 SMC5Q8IY18 1101 aa20.24■□□□□ 0.83
LRRC42-201ENST00000319223 USP40Q9NVE5 1235 aa20.24■□□□□ 0.83
LRRC42-201ENST00000319223 TLL2Q9Y6L7 1015 aa20.24■□□□□ 0.83
LRRC42-201ENST00000319223 CNTNAP1P78357 1384 aa20.24■□□□□ 0.83
LRRC42-201ENST00000319223 BTDP43251 543 aa20.24■□□□□ 0.83
LRRC42-201ENST00000319223 ADGRA1Q86SQ6 560 aa20.24■□□□□ 0.83
LRRC42-201ENST00000319223 SAPCD2Q86UD0 394 aa20.24■□□□□ 0.83
LRRC42-201ENST00000319223 GBA2Q9HCG7 927 aaPredicted RBP20.24■□□□□ 0.83
LRRC42-201ENST00000319223 ECHDC1Q9NTX5 307 aa20.24■□□□□ 0.83
LRRC42-201ENST00000319223 FZD1Q9UP38 647 aa20.24■□□□□ 0.83
LRRC42-201ENST00000319223 GPR75-ASB3A0A0A6YYF3 556 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms