RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 DHX58Q96C10 678 aa11.14□□□□□ -0.63
RPGR-201ENST00000318842 PUS7LQ9H0K6 701 aaKnown RBP11.14□□□□□ -0.63
RPGR-201ENST00000318842 ZSCAN16Q9H4T2 348 aaPredicted RBP11.14□□□□□ -0.63
RPGR-201ENST00000318842 ATP5JP18859 108 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 CDC25BP30305 580 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 LMAN1P49257 510 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 FMR1Q06787 632 aaKnown RBP eCLIP11.13□□□□□ -0.63
RPGR-201ENST00000318842 PHF8Q9UPP1 1060 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 PARP3Q9Y6F1 533 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 U3KPZ7 1027 aaPredicted RBP11.13□□□□□ -0.63
RPGR-201ENST00000318842 SPATA31D1Q6ZQQ2 1576 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 VWA3AA6NCI4 1184 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 SOWAHDA6NJG2 315 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 CPLX1O14810 134 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 PRC1O43663 620 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 CCDC93Q567U6 631 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 SHC4Q6S5L8 630 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 TMCO3Q6UWJ1 677 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 REXO1L1PQ8IX06 675 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 DDX21Q9NR30 783 aaKnown RBP eCLIP11.13□□□□□ -0.63
RPGR-201ENST00000318842 APPP05067 770 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 ANTXR2P58335 489 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 ETF1P62495 437 aaKnown RBP11.13□□□□□ -0.63
RPGR-201ENST00000318842 MRPS25P82663 173 aaKnown RBP11.13□□□□□ -0.63
RPGR-201ENST00000318842 EXOSC10Q01780 885 aaKnown RBP11.13□□□□□ -0.63
RPGR-201ENST00000318842 PLEKHO1Q53GL0 409 aaPredicted RBP11.13□□□□□ -0.63
RPGR-201ENST00000318842 MYSM1Q5VVJ2 828 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 ZNF790Q6PG37 636 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 MRPL44Q9H9J2 332 aaKnown RBP11.13□□□□□ -0.63
RPGR-201ENST00000318842 POLD4Q9HCU8 107 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 HMG20BQ9P0W2 317 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 KCNJ14Q9UNX9 436 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 HPS5Q9UPZ3 1129 aa11.13□□□□□ -0.63
RPGR-201ENST00000318842 HIP1O00291 1037 aa11.12□□□□□ -0.63
RPGR-201ENST00000318842 TBC1D8O95759 1140 aa11.12□□□□□ -0.63
RPGR-201ENST00000318842 A1BGP04217 495 aa11.12□□□□□ -0.63
RPGR-201ENST00000318842 RHOXF2BP0C7M4 288 aa11.12□□□□□ -0.63
RPGR-201ENST00000318842 CDC25AP30304 524 aa11.12□□□□□ -0.63
RPGR-201ENST00000318842 CYP2C19P33261 490 aa11.12□□□□□ -0.63
RPGR-201ENST00000318842 KBTBD3Q8NAB2 608 aa11.12□□□□□ -0.63
RPGR-201ENST00000318842 RHOXF2Q9BQY4 288 aa11.12□□□□□ -0.63
RPGR-201ENST00000318842 SAMSN1Q9NSI8 373 aaKnown RBP11.12□□□□□ -0.63
RPGR-201ENST00000318842 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.12□□□□□ -0.63
RPGR-201ENST00000318842 EID1Q9Y6B2 187 aa11.12□□□□□ -0.63
RPGR-201ENST00000318842 PXDNLA1KZ92 1463 aa11.12□□□□□ -0.63
RPGR-201ENST00000318842 EPB41L2O43491 1005 aaKnown RBP11.12□□□□□ -0.63
RPGR-201ENST00000318842 IFIT1P09914 478 aaKnown RBP11.12□□□□□ -0.63
RPGR-201ENST00000318842 GUCY1A2P33402 732 aa11.12□□□□□ -0.63
RPGR-201ENST00000318842 AXDND1Q5T1B0 1012 aaPredicted RBP11.12□□□□□ -0.63
RPGR-201ENST00000318842 ZNF396Q96N95 335 aaPredicted RBP11.12□□□□□ -0.63
RPGR-201ENST00000318842 HAUS7Q99871 368 aa11.12□□□□□ -0.63
RPGR-201ENST00000318842 FAM205CA6NFA0 338 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 FGAP02671 866 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 GCP02774 474 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 BMS1Q14692 1282 aaKnown RBP11.11□□□□□ -0.63
RPGR-201ENST00000318842 SYNE3Q6ZMZ3 975 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.11□□□□□ -0.63
RPGR-201ENST00000318842 L2HGDHQ9H9P8 463 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 PCDHA5Q9Y5H7 936 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 TEX33O43247 280 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 TADA3O75528 432 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 SYKP43405 635 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 ADALQ6DHV7 355 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 ATG9AQ7Z3C6 839 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 METTL16Q86W50 562 aaKnown RBP11.11□□□□□ -0.63
RPGR-201ENST00000318842 PARD6BQ9BYG5 372 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 FAM53CQ9NYF3 392 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 PPP2R2CQ9Y2T4 447 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 A0A1B0GUL7 405 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 ZMYND10O75800 440 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 DDX58O95786 925 aaKnown RBP11.11□□□□□ -0.63
RPGR-201ENST00000318842 TOP1P11387 765 aaKnown RBP11.11□□□□□ -0.63
RPGR-201ENST00000318842 KRT32Q14532 448 aa11.11□□□□□ -0.63
RPGR-201ENST00000318842 NAA16Q6N069 864 aaPredicted RBP11.11□□□□□ -0.63
RPGR-201ENST00000318842 NAT10Q9H0A0 1025 aaKnown RBP11.11□□□□□ -0.63
RPGR-201ENST00000318842 OSBPL5Q9H0X9 879 aaPredicted RBP11.11□□□□□ -0.63
RPGR-201ENST00000318842 SALL1Q9NSC2 1324 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 B4E1Z4 1266 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 ZAP70P43403 619 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 HDGFP51858 240 aaKnown RBP11.1□□□□□ -0.63
RPGR-201ENST00000318842 RRP12Q5JTH9 1297 aaKnown RBP11.1□□□□□ -0.63
RPGR-201ENST00000318842 ANO1Q5XXA6 986 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 CYB5R4Q7L1T6 521 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 CCDC191Q8NCU4 936 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 HELBQ8NG08 1087 aaPredicted RBP11.1□□□□□ -0.63
RPGR-201ENST00000318842 TECPR2O15040 1411 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 LRRC37A3O60309 1634 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 SMC1AQ14683 1233 aaKnown RBP11.1□□□□□ -0.63
RPGR-201ENST00000318842 SYCP1Q15431 976 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 VPS37DQ86XT2 251 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 CCDC12Q8WUD4 166 aaPredicted RBP11.1□□□□□ -0.63
RPGR-201ENST00000318842 MED15Q96RN5 788 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 METTL22Q9BUU2 404 aaPredicted RBP11.1□□□□□ -0.63
RPGR-201ENST00000318842 TOMM22Q9NS69 142 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 DIP2BQ9P265 1576 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 CRYBG1Q9Y4K1 1723 aa11.1□□□□□ -0.63
RPGR-201ENST00000318842 NALCNQ8IZF0 1738 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 ZRANB2O95218 330 aaKnown RBP eCLIP11.09□□□□□ -0.63
RPGR-201ENST00000318842 CSB-PGBD3P0DP91 1061 aa11.09□□□□□ -0.63
RPGR-201ENST00000318842 NLRP12P59046 1061 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms