RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 FZD1Q9UP38 647 aa19.46■□□□□ 0.71
FOXR1-201ENST00000317011 HDAC5Q9UQL6 1122 aa19.46■□□□□ 0.71
FOXR1-201ENST00000317011 SSC5DA1L4H1 1573 aa19.45■□□□□ 0.7
FOXR1-201ENST00000317011 DGKZQ13574 1117 aa19.45■□□□□ 0.7
FOXR1-201ENST00000317011 SLC10A4Q96EP9 437 aa19.45■□□□□ 0.7
FOXR1-201ENST00000317011 TDRD3Q9H7E2 651 aaKnown RBP19.45■□□□□ 0.7
FOXR1-201ENST00000317011 IQSEC3Q9UPP2 1182 aaPredicted RBP19.45■□□□□ 0.7
FOXR1-201ENST00000317011 INHBEP58166 350 aa19.44■□□□□ 0.7
FOXR1-201ENST00000317011 VEZTQ9HBM0 779 aa19.44■□□□□ 0.7
FOXR1-201ENST00000317011 COPRSQ9NQ92 184 aa19.44■□□□□ 0.7
FOXR1-201ENST00000317011 TNFAIP1Q13829 316 aa19.43■□□□□ 0.7
FOXR1-201ENST00000317011 ZDHHC15Q96MV8 337 aa19.43■□□□□ 0.7
FOXR1-201ENST00000317011 MEIS3Q99687 375 aa19.43■□□□□ 0.7
FOXR1-201ENST00000317011 LRRFIP2Q9Y608 721 aaKnown RBP19.43■□□□□ 0.7
FOXR1-201ENST00000317011 ZBTB48P10074 688 aaPredicted RBP19.42■□□□□ 0.7
FOXR1-201ENST00000317011 SLC5A1P13866 664 aa19.42■□□□□ 0.7
FOXR1-201ENST00000317011 SREBF2Q12772 1141 aa19.42■□□□□ 0.7
FOXR1-201ENST00000317011 CHAF1AQ13111 956 aaPredicted RBP19.42■□□□□ 0.7
FOXR1-201ENST00000317011 APOBEC3HQ6NTF7 200 aaKnown RBP19.42■□□□□ 0.7
FOXR1-201ENST00000317011 HHIPL2Q6UWX4 724 aa19.42■□□□□ 0.7
FOXR1-201ENST00000317011 CLMNQ96JQ2 1002 aa19.42■□□□□ 0.7
FOXR1-201ENST00000317011 CEP126Q9P2H0 1117 aa19.42■□□□□ 0.7
FOXR1-201ENST00000317011 FRAT2O75474 233 aaPredicted RBP19.41■□□□□ 0.7
FOXR1-201ENST00000317011 TBC1D8O95759 1140 aa19.41■□□□□ 0.7
FOXR1-201ENST00000317011 IL15P40933 162 aaPredicted RBP19.41■□□□□ 0.7
FOXR1-201ENST00000317011 MTX1Q13505 466 aa19.41■□□□□ 0.7
FOXR1-201ENST00000317011 WNK4Q96J92 1243 aa19.41■□□□□ 0.7
FOXR1-201ENST00000317011 AKAP11Q9UKA4 1901 aa19.41■□□□□ 0.7
FOXR1-201ENST00000317011 MANSC4A6NHS7 340 aaPredicted RBP19.4■□□□□ 0.7
FOXR1-201ENST00000317011 CCDC85CA6NKD9 419 aa19.4■□□□□ 0.7
FOXR1-201ENST00000317011 IREB2P48200 963 aaKnown RBP19.4■□□□□ 0.7
FOXR1-201ENST00000317011 MKRN3Q13064 507 aaKnown RBP19.4■□□□□ 0.7
FOXR1-201ENST00000317011 FKBP1CQ5VVH2 108 aa19.4■□□□□ 0.7
FOXR1-201ENST00000317011 ANKRD13AQ8IZ07 590 aa19.4■□□□□ 0.7
FOXR1-201ENST00000317011 WDR66Q8TBY9 1149 aa19.4■□□□□ 0.7
FOXR1-201ENST00000317011 TEKT1Q969V4 418 aa19.4■□□□□ 0.7
FOXR1-201ENST00000317011 TESPA1A2RU30 521 aaPredicted RBP19.39■□□□□ 0.69
FOXR1-201ENST00000317011 GPR25O00155 361 aa19.39■□□□□ 0.69
FOXR1-201ENST00000317011 IPO8O15397 1037 aaKnown RBP19.39■□□□□ 0.69
FOXR1-201ENST00000317011 GNAI3P08754 354 aa19.39■□□□□ 0.69
FOXR1-201ENST00000317011 GJA5P36382 358 aa19.39■□□□□ 0.69
FOXR1-201ENST00000317011 CTU1Q7Z7A3 348 aaKnown RBP19.39■□□□□ 0.69
FOXR1-201ENST00000317011 CDAN1Q8IWY9 1227 aa19.39■□□□□ 0.69
FOXR1-201ENST00000317011 ZNF296Q8WUU4 475 aaPredicted RBP19.39■□□□□ 0.69
FOXR1-201ENST00000317011 R3HDMLQ9H3Y0 253 aa19.39■□□□□ 0.69
FOXR1-201ENST00000317011 PA2G4Q9UQ80 394 aaKnown RBP19.39■□□□□ 0.69
FOXR1-201ENST00000317011 TCP10L2B9ZVM9 353 aa19.38■□□□□ 0.69
FOXR1-201ENST00000317011 BCAR3O75815 825 aa19.38■□□□□ 0.69
FOXR1-201ENST00000317011 ALDH1A1P00352 501 aa19.38■□□□□ 0.69
FOXR1-201ENST00000317011 TRIM27P14373 513 aa19.38■□□□□ 0.69
FOXR1-201ENST00000317011 ATP2B3Q16720 1220 aa19.38■□□□□ 0.69
FOXR1-201ENST00000317011 ECM29Q5VYK3 1845 aa19.38■□□□□ 0.69
FOXR1-201ENST00000317011 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.38■□□□□ 0.69
FOXR1-201ENST00000317011 FAM83AQ86UY5 434 aa19.38■□□□□ 0.69
FOXR1-201ENST00000317011 IFNL1Q8IU54 200 aa19.38■□□□□ 0.69
FOXR1-201ENST00000317011 TMEM39BQ9GZU3 492 aa19.38■□□□□ 0.69
FOXR1-201ENST00000317011 SIL1Q9H173 461 aa19.38■□□□□ 0.69
FOXR1-201ENST00000317011 MAST3O60307 1309 aa19.37■□□□□ 0.69
FOXR1-201ENST00000317011 TNNI2P48788 182 aa19.37■□□□□ 0.69
FOXR1-201ENST00000317011 ATF7IPQ6VMQ6 1270 aa19.37■□□□□ 0.69
FOXR1-201ENST00000317011 SALL1Q9NSC2 1324 aa19.36■□□□□ 0.69
FOXR1-201ENST00000317011 SEMA3EO15041 775 aa19.36■□□□□ 0.69
FOXR1-201ENST00000317011 MAP3K9P80192 1104 aa19.36■□□□□ 0.69
FOXR1-201ENST00000317011 PKN2Q16513 984 aaKnown RBP19.36■□□□□ 0.69
FOXR1-201ENST00000317011 IGF2BP3O00425 579 aaKnown RBP eCLIP19.35■□□□□ 0.69
FOXR1-201ENST00000317011 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.35■□□□□ 0.69
FOXR1-201ENST00000317011 MS4A4AQ96JQ5 239 aa19.35■□□□□ 0.69
FOXR1-201ENST00000317011 PTPN18Q99952 460 aa19.35■□□□□ 0.69
FOXR1-201ENST00000317011 GNL3LQ9NVN8 582 aaKnown RBP19.35■□□□□ 0.69
FOXR1-201ENST00000317011 TNNQ9UQP3 1299 aa19.35■□□□□ 0.69
FOXR1-201ENST00000317011 PHKA1P46020 1223 aa19.34■□□□□ 0.69
FOXR1-201ENST00000317011 TIMM10P62072 90 aa19.34■□□□□ 0.69
FOXR1-201ENST00000317011 DENND2AQ9ULE3 1009 aa19.34■□□□□ 0.69
FOXR1-201ENST00000317011 SRGAP3O43295 1099 aa19.33■□□□□ 0.68
FOXR1-201ENST00000317011 CACNB3P54284 484 aa19.33■□□□□ 0.68
FOXR1-201ENST00000317011 CCDC102BQ68D86 513 aa19.33■□□□□ 0.68
FOXR1-201ENST00000317011 ARAP2Q8WZ64 1704 aa19.33■□□□□ 0.68
FOXR1-201ENST00000317011 FKTNO75072 461 aa19.32■□□□□ 0.68
FOXR1-201ENST00000317011 PRDX5P30044 214 aa19.32■□□□□ 0.68
FOXR1-201ENST00000317011 ADORA1P30542 326 aa19.32■□□□□ 0.68
FOXR1-201ENST00000317011 OPTNQ96CV9 577 aa19.32■□□□□ 0.68
FOXR1-201ENST00000317011 DAGLAQ9Y4D2 1042 aa19.32■□□□□ 0.68
FOXR1-201ENST00000317011 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.32■□□□□ 0.68
FOXR1-201ENST00000317011 PDS5AQ29RF7 1337 aaKnown RBP19.31■□□□□ 0.68
FOXR1-201ENST00000317011 GNAI2P04899 355 aa19.31■□□□□ 0.68
FOXR1-201ENST00000317011 VGLL4Q14135 290 aa19.31■□□□□ 0.68
FOXR1-201ENST00000317011 CDC42EP5Q6NZY7 148 aa19.31■□□□□ 0.68
FOXR1-201ENST00000317011 FAM151AQ8WW52 585 aa19.31■□□□□ 0.68
FOXR1-201ENST00000317011 FAM163AQ96GL9 167 aaPredicted RBP19.31■□□□□ 0.68
FOXR1-201ENST00000317011 ELP3Q9H9T3 547 aa19.31■□□□□ 0.68
FOXR1-201ENST00000317011 TMOD2Q9NZR1 351 aa19.31■□□□□ 0.68
FOXR1-201ENST00000317011 LDHBP07195 334 aaKnown RBP19.3■□□□□ 0.68
FOXR1-201ENST00000317011 TFCP2Q12800 502 aa19.3■□□□□ 0.68
FOXR1-201ENST00000317011 DIXDC1Q155Q3 683 aa19.3■□□□□ 0.68
FOXR1-201ENST00000317011 FRAT1Q92837 279 aaPredicted RBP19.3■□□□□ 0.68
FOXR1-201ENST00000317011 HOOK2Q96ED9 719 aa19.3■□□□□ 0.68
FOXR1-201ENST00000317011 ZNF112Q9UJU3 913 aa19.3■□□□□ 0.68
FOXR1-201ENST00000317011 AKAP2Q9Y2D5 859 aa19.3■□□□□ 0.68
FOXR1-201ENST00000317011 RPAP1Q9BWH6 1393 aaPredicted RBP19.3■□□□□ 0.68
FOXR1-201ENST00000317011 PNMA6EA0A0J9YXQ4 647 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms