RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 DEFB129Q9H1M3 183 aa22.71■■□□□ 1.23
RPA2-201ENST00000313433 TDRD3Q9H7E2 651 aaKnown RBP22.71■■□□□ 1.23
RPA2-201ENST00000313433 RBM5P52756 815 aaKnown RBP eCLIP22.7■■□□□ 1.22
RPA2-201ENST00000313433 CEP85Q6P2H3 762 aa22.7■■□□□ 1.22
RPA2-201ENST00000313433 CDAN1Q8IWY9 1227 aa22.7■■□□□ 1.22
RPA2-201ENST00000313433 XAGE2Q96GT9 111 aa22.7■■□□□ 1.22
RPA2-201ENST00000313433 ZBTB40Q9NUA8 1239 aa22.7■■□□□ 1.22
RPA2-201ENST00000313433 ZNF70Q9UC06 446 aaPredicted RBP22.7■■□□□ 1.22
RPA2-201ENST00000313433 LAMB1P07942 1786 aa22.7■■□□□ 1.22
RPA2-201ENST00000313433 AKAP11Q9UKA4 1901 aa22.69■■□□□ 1.22
RPA2-201ENST00000313433 MYH2Q9UKX2 1941 aa22.69■■□□□ 1.22
RPA2-201ENST00000313433 UBE2Q2LH0YL09 131 aa22.69■■□□□ 1.22
RPA2-201ENST00000313433 SLC10A3P09131 477 aa22.69■■□□□ 1.22
RPA2-201ENST00000313433 RASGRF1Q13972 1273 aa22.69■■□□□ 1.22
RPA2-201ENST00000313433 PDE3AQ14432 1141 aa22.69■■□□□ 1.22
RPA2-201ENST00000313433 RASAL3Q86YV0 1011 aa22.69■■□□□ 1.22
RPA2-201ENST00000313433 SIRT2Q8IXJ6 389 aa22.69■■□□□ 1.22
RPA2-201ENST00000313433 PRDX5P30044 214 aa22.68■■□□□ 1.22
RPA2-201ENST00000313433 MAP2K2P36507 400 aa22.68■■□□□ 1.22
RPA2-201ENST00000313433 FKBP1BP68106 108 aa22.68■■□□□ 1.22
RPA2-201ENST00000313433 HDLBPQ00341 1268 aaKnown RBP22.68■■□□□ 1.22
RPA2-201ENST00000313433 VEZTQ9HBM0 779 aa22.68■■□□□ 1.22
RPA2-201ENST00000313433 SALL1Q9NSC2 1324 aa22.67■■□□□ 1.22
RPA2-201ENST00000313433 APOBEC3HQ6NTF7 200 aaKnown RBP22.67■■□□□ 1.22
RPA2-201ENST00000313433 WDR66Q8TBY9 1149 aa22.67■■□□□ 1.22
RPA2-201ENST00000313433 TEPSINQ96N21 525 aa22.67■■□□□ 1.22
RPA2-201ENST00000313433 NOP58Q9Y2X3 529 aaKnown RBP22.67■■□□□ 1.22
RPA2-201ENST00000313433 SUGT1Q9Y2Z0 365 aa22.67■■□□□ 1.22
RPA2-201ENST00000313433 MYO5AQ9Y4I1 1855 aaKnown RBP22.66■■□□□ 1.22
RPA2-201ENST00000313433 HSPA8P11142 646 aaKnown RBP22.66■■□□□ 1.22
RPA2-201ENST00000313433 MS4A1P11836 297 aa22.66■■□□□ 1.22
RPA2-201ENST00000313433 ZNF157P51786 506 aaPredicted RBP22.66■■□□□ 1.22
RPA2-201ENST00000313433 RRP1P56182 461 aaKnown RBP22.66■■□□□ 1.22
RPA2-201ENST00000313433 RASA3Q14644 834 aa22.66■■□□□ 1.22
RPA2-201ENST00000313433 NBPF12Q5TAG4 269 aaPredicted RBP22.66■■□□□ 1.22
RPA2-201ENST00000313433 TEKT1Q969V4 418 aa22.66■■□□□ 1.22
RPA2-201ENST00000313433 ZDHHC15Q96MV8 337 aa22.66■■□□□ 1.22
RPA2-201ENST00000313433 AKAP2Q9Y2D5 859 aa22.66■■□□□ 1.22
RPA2-201ENST00000313433 SEMA3EO15041 775 aa22.65■■□□□ 1.22
RPA2-201ENST00000313433 MYO1BO43795 1136 aa22.65■■□□□ 1.22
RPA2-201ENST00000313433 CACNB3P54284 484 aa22.65■■□□□ 1.22
RPA2-201ENST00000313433 MAP2K1Q02750 393 aaPredicted RBP22.65■■□□□ 1.22
RPA2-201ENST00000313433 G3BP1Q13283 466 aaKnown RBP eCLIP22.65■■□□□ 1.22
RPA2-201ENST00000313433 PRKG1Q13976 671 aa22.65■■□□□ 1.22
RPA2-201ENST00000313433 DIXDC1Q155Q3 683 aa22.65■■□□□ 1.22
RPA2-201ENST00000313433 PI16Q6UXB8 463 aa22.65■■□□□ 1.22
RPA2-201ENST00000313433 MRIQ9BWK5 157 aa22.65■■□□□ 1.22
RPA2-201ENST00000313433 DENND2AQ9ULE3 1009 aa22.65■■□□□ 1.22
RPA2-201ENST00000313433 DDX19BQ9UMR2 479 aa22.65■■□□□ 1.22
RPA2-201ENST00000313433 PPP2R3BQ9Y5P8 575 aa22.65■■□□□ 1.22
RPA2-201ENST00000313433 PDS5AQ29RF7 1337 aaKnown RBP22.64■■□□□ 1.22
RPA2-201ENST00000313433 NOGQ13253 232 aa22.64■■□□□ 1.21
RPA2-201ENST00000313433 GNL3LQ9NVN8 582 aaKnown RBP22.64■■□□□ 1.21
RPA2-201ENST00000313433 DAGLAQ9Y4D2 1042 aa22.64■■□□□ 1.21
RPA2-201ENST00000313433 TCP10L2B9ZVM9 353 aa22.63■■□□□ 1.21
RPA2-201ENST00000313433 SURF6O75683 361 aaKnown RBP22.63■■□□□ 1.21
RPA2-201ENST00000313433 LDLRAD1Q5T700 205 aa22.63■■□□□ 1.21
RPA2-201ENST00000313433 HHIPL2Q6UWX4 724 aa22.63■■□□□ 1.21
RPA2-201ENST00000313433 ZNF384Q8TF68 577 aa22.63■■□□□ 1.21
RPA2-201ENST00000313433 NEUROD6Q96NK8 337 aa22.63■■□□□ 1.21
RPA2-201ENST00000313433 MAST3O60307 1309 aa22.62■■□□□ 1.21
RPA2-201ENST00000313433 ARID4AP29374 1257 aaPredicted RBP22.62■■□□□ 1.21
RPA2-201ENST00000313433 CTCFP49711 727 aaPredicted RBP22.62■■□□□ 1.21
RPA2-201ENST00000313433 LBX1P52954 281 aa22.62■■□□□ 1.21
RPA2-201ENST00000313433 KIF23Q02241 960 aaPredicted RBP22.62■■□□□ 1.21
RPA2-201ENST00000313433 TNNI3KQ59H18 835 aa22.62■■□□□ 1.21
RPA2-201ENST00000313433 CCDC102AQ96A19 550 aa22.62■■□□□ 1.21
RPA2-201ENST00000313433 TMEM39BQ9GZU3 492 aa22.62■■□□□ 1.21
RPA2-201ENST00000313433 HMG20BQ9P0W2 317 aa22.62■■□□□ 1.21
RPA2-201ENST00000313433 TSKSQ9UJT2 592 aa22.62■■□□□ 1.21
RPA2-201ENST00000313433 FPGT-TNNI3KV9GXZ4 949 aa22.62■■□□□ 1.21
RPA2-201ENST00000313433 MAST2Q6P0Q8 1798 aa22.62■■□□□ 1.21
RPA2-201ENST00000313433 NF2P35240 595 aa22.61■■□□□ 1.21
RPA2-201ENST00000313433 TTLL12Q14166 644 aaPredicted RBP22.61■■□□□ 1.21
RPA2-201ENST00000313433 MAP3K11Q16584 847 aa22.61■■□□□ 1.21
RPA2-201ENST00000313433 AIDAQ96BJ3 306 aa22.61■■□□□ 1.21
RPA2-201ENST00000313433 DBNDD2Q9BQY9 259 aa22.61■■□□□ 1.21
RPA2-201ENST00000313433 GPR108Q9NPR9 543 aa22.61■■□□□ 1.21
RPA2-201ENST00000313433 TLR7Q9NYK1 1049 aaKnown RBP22.61■■□□□ 1.21
RPA2-201ENST00000313433 ANGEL1Q9UNK9 670 aaKnown RBP22.61■■□□□ 1.21
RPA2-201ENST00000313433 LDHBP07195 334 aaKnown RBP22.6■■□□□ 1.21
RPA2-201ENST00000313433 MCAMP43121 646 aa22.6■■□□□ 1.21
RPA2-201ENST00000313433 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.6■■□□□ 1.21
RPA2-201ENST00000313433 CLMNQ96JQ2 1002 aa22.6■■□□□ 1.21
RPA2-201ENST00000313433 CSRNP1Q96S65 589 aa22.59■■□□□ 1.21
RPA2-201ENST00000313433 EXOC6BQ9Y2D4 811 aa22.59■■□□□ 1.21
RPA2-201ENST00000313433 RFX7Q2KHR2 1363 aa22.59■■□□□ 1.21
RPA2-201ENST00000313433 GAKO14976 1311 aa22.58■■□□□ 1.21
RPA2-201ENST00000313433 USP2O75604 605 aaPredicted RBP22.58■■□□□ 1.21
RPA2-201ENST00000313433 TNFAIP1Q13829 316 aa22.58■■□□□ 1.21
RPA2-201ENST00000313433 CDC42EP5Q6NZY7 148 aa22.58■■□□□ 1.21
RPA2-201ENST00000313433 ARMC9Q7Z3E5 817 aa22.58■■□□□ 1.21
RPA2-201ENST00000313433 PRDM10Q9NQV6 1147 aa22.58■■□□□ 1.21
RPA2-201ENST00000313433 DBNLQ9UJU6 430 aaKnown RBP22.58■■□□□ 1.21
RPA2-201ENST00000313433 DOCK2Q92608 1830 aa22.57■■□□□ 1.2
RPA2-201ENST00000313433 OS9Q13438 667 aaPredicted RBP22.57■■□□□ 1.2
RPA2-201ENST00000313433 TBC1D9Q6ZT07 1266 aa22.57■■□□□ 1.2
RPA2-201ENST00000313433 SPATA5Q8NB90 893 aa22.57■■□□□ 1.2
RPA2-201ENST00000313433 EAF2Q96CJ1 260 aaPredicted RBP22.57■■□□□ 1.2
RPA2-201ENST00000313433 CDK5RAP2Q96SN8 1893 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms