RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ZNF70Q9UC06 446 aaPredicted RBP24.68■■□□□ 1.54
PDZRN3-202ENST00000308537 LAMB1P07942 1786 aa24.67■■□□□ 1.54
PDZRN3-202ENST00000308537 CASP8AP2Q9UKL3 1982 aa24.67■■□□□ 1.54
PDZRN3-202ENST00000308537 AKAP11Q9UKA4 1901 aa24.67■■□□□ 1.54
PDZRN3-202ENST00000308537 ADORA1P30542 326 aa24.67■■□□□ 1.54
PDZRN3-202ENST00000308537 PPP2R3BQ9Y5P8 575 aa24.67■■□□□ 1.54
PDZRN3-202ENST00000308537 OTOFQ9HC10 1997 aa24.66■■□□□ 1.54
PDZRN3-202ENST00000308537 PHKA1P46020 1223 aa24.66■■□□□ 1.54
PDZRN3-202ENST00000308537 MAP3K11Q16584 847 aa24.66■■□□□ 1.54
PDZRN3-202ENST00000308537 CDAN1Q8IWY9 1227 aa24.66■■□□□ 1.54
PDZRN3-202ENST00000308537 TEPSINQ96N21 525 aa24.66■■□□□ 1.54
PDZRN3-202ENST00000308537 CSRNP1Q96S65 589 aa24.66■■□□□ 1.54
PDZRN3-202ENST00000308537 MRIQ9BWK5 157 aa24.66■■□□□ 1.54
PDZRN3-202ENST00000308537 TDRD3Q9H7E2 651 aaKnown RBP24.66■■□□□ 1.54
PDZRN3-202ENST00000308537 SUGT1Q9Y2Z0 365 aa24.66■■□□□ 1.54
PDZRN3-202ENST00000308537 RBM5P52756 815 aaKnown RBP eCLIP24.65■■□□□ 1.54
PDZRN3-202ENST00000308537 RASA3Q14644 834 aa24.65■■□□□ 1.54
PDZRN3-202ENST00000308537 NBPF12Q5TAG4 269 aaPredicted RBP24.65■■□□□ 1.54
PDZRN3-202ENST00000308537 VEZTQ9HBM0 779 aa24.65■■□□□ 1.54
PDZRN3-202ENST00000308537 CA12O43570 354 aa24.64■■□□□ 1.54
PDZRN3-202ENST00000308537 MYO1BO43795 1136 aa24.64■■□□□ 1.54
PDZRN3-202ENST00000308537 TFCP2Q12800 502 aa24.64■■□□□ 1.54
PDZRN3-202ENST00000308537 POLA2Q14181 598 aa24.64■■□□□ 1.54
PDZRN3-202ENST00000308537 APOBEC3HQ6NTF7 200 aaKnown RBP24.64■■□□□ 1.54
PDZRN3-202ENST00000308537 ZBTB7BO15156 539 aaPredicted RBP24.63■■□□□ 1.53
PDZRN3-202ENST00000308537 FRAT2O75474 233 aaPredicted RBP24.63■■□□□ 1.53
PDZRN3-202ENST00000308537 NF2P35240 595 aa24.63■■□□□ 1.53
PDZRN3-202ENST00000308537 TIMM10P62072 90 aa24.63■■□□□ 1.53
PDZRN3-202ENST00000308537 PRKG1Q13976 671 aa24.63■■□□□ 1.53
PDZRN3-202ENST00000308537 ZDHHC15Q96MV8 337 aa24.63■■□□□ 1.53
PDZRN3-202ENST00000308537 BEGAINQ9BUH8 593 aa24.63■■□□□ 1.53
PDZRN3-202ENST00000308537 CCDC102BQ68D86 513 aa24.62■■□□□ 1.53
PDZRN3-202ENST00000308537 WDR66Q8TBY9 1149 aa24.62■■□□□ 1.53
PDZRN3-202ENST00000308537 SALL1Q9NSC2 1324 aa24.61■■□□□ 1.53
PDZRN3-202ENST00000308537 A0A1B0GUL7 405 aa24.61■■□□□ 1.53
PDZRN3-202ENST00000308537 PRDX5P30044 214 aa24.61■■□□□ 1.53
PDZRN3-202ENST00000308537 HHIPL2Q6UWX4 724 aa24.61■■□□□ 1.53
PDZRN3-202ENST00000308537 SSH3Q8TE77 659 aa24.61■■□□□ 1.53
PDZRN3-202ENST00000308537 TEKT1Q969V4 418 aa24.61■■□□□ 1.53
PDZRN3-202ENST00000308537 ANGEL1Q9UNK9 670 aaKnown RBP24.61■■□□□ 1.53
PDZRN3-202ENST00000308537 TTLL12Q14166 644 aaPredicted RBP24.6■■□□□ 1.53
PDZRN3-202ENST00000308537 ARMC9Q7Z3E5 817 aa24.6■■□□□ 1.53
PDZRN3-202ENST00000308537 C1orf115Q9H7X2 142 aa24.6■■□□□ 1.53
PDZRN3-202ENST00000308537 RNF186Q9NXI6 227 aa24.6■■□□□ 1.53
PDZRN3-202ENST00000308537 SEMA3EO15041 775 aa24.59■■□□□ 1.53
PDZRN3-202ENST00000308537 USP2O75604 605 aaPredicted RBP24.59■■□□□ 1.53
PDZRN3-202ENST00000308537 ATP8B2P98198 1209 aa24.59■■□□□ 1.53
PDZRN3-202ENST00000308537 RASGRF1Q13972 1273 aa24.59■■□□□ 1.53
PDZRN3-202ENST00000308537 XAGE2Q96GT9 111 aa24.59■■□□□ 1.53
PDZRN3-202ENST00000308537 SAGE1Q9NXZ1 904 aa24.59■■□□□ 1.53
PDZRN3-202ENST00000308537 CACNB3P54284 484 aa24.58■■□□□ 1.53
PDZRN3-202ENST00000308537 CLMNQ96JQ2 1002 aa24.58■■□□□ 1.53
PDZRN3-202ENST00000308537 TMEM39BQ9GZU3 492 aa24.58■■□□□ 1.53
PDZRN3-202ENST00000308537 MAST3O60307 1309 aa24.58■■□□□ 1.52
PDZRN3-202ENST00000308537 PDS5AQ29RF7 1337 aaKnown RBP24.58■■□□□ 1.52
PDZRN3-202ENST00000308537 MYH2Q9UKX2 1941 aa24.57■■□□□ 1.52
PDZRN3-202ENST00000308537 TCP10L2B9ZVM9 353 aa24.57■■□□□ 1.52
PDZRN3-202ENST00000308537 TNFAIP1Q13829 316 aa24.57■■□□□ 1.52
PDZRN3-202ENST00000308537 DIXDC1Q155Q3 683 aa24.57■■□□□ 1.52
PDZRN3-202ENST00000308537 SUPT20HL1Q3ZLR7 823 aa24.57■■□□□ 1.52
PDZRN3-202ENST00000308537 ITPRIPQ8IWB1 547 aa24.57■■□□□ 1.52
PDZRN3-202ENST00000308537 FTSJ3Q8IY81 847 aaKnown RBP24.57■■□□□ 1.52
PDZRN3-202ENST00000308537 PANK1Q8TE04 598 aa24.57■■□□□ 1.52
PDZRN3-202ENST00000308537 DENND2AQ9ULE3 1009 aa24.57■■□□□ 1.52
PDZRN3-202ENST00000308537 DAGLAQ9Y4D2 1042 aa24.57■■□□□ 1.52
PDZRN3-202ENST00000308537 FKBP1CQ5VVH2 108 aa24.56■■□□□ 1.52
PDZRN3-202ENST00000308537 GNL3LQ9NVN8 582 aaKnown RBP24.56■■□□□ 1.52
PDZRN3-202ENST00000308537 TM4SF4P48230 202 aa24.55■■□□□ 1.52
PDZRN3-202ENST00000308537 SPRYD7Q5W111 196 aa24.55■■□□□ 1.52
PDZRN3-202ENST00000308537 REM2Q8IYK8 340 aaPredicted RBP24.55■■□□□ 1.52
PDZRN3-202ENST00000308537 AKAP2Q9Y2D5 859 aa24.55■■□□□ 1.52
PDZRN3-202ENST00000308537 UNCXA6NJT0 531 aa24.54■■□□□ 1.52
PDZRN3-202ENST00000308537 PPP1R12BO60237 982 aaPredicted RBP24.54■■□□□ 1.52
PDZRN3-202ENST00000308537 TRPA1O75762 1119 aa24.54■■□□□ 1.52
PDZRN3-202ENST00000308537 GJA5P36382 358 aa24.53■■□□□ 1.52
PDZRN3-202ENST00000308537 FAM83AQ86UY5 434 aa24.53■■□□□ 1.52
PDZRN3-202ENST00000308537 ZNF384Q8TF68 577 aa24.53■■□□□ 1.52
PDZRN3-202ENST00000308537 NOP58Q9Y2X3 529 aaKnown RBP24.53■■□□□ 1.52
PDZRN3-202ENST00000308537 RPAP1Q9BWH6 1393 aaPredicted RBP24.53■■□□□ 1.52
PDZRN3-202ENST00000308537 MKRN3Q13064 507 aaKnown RBP24.52■■□□□ 1.52
PDZRN3-202ENST00000308537 G3BP1Q13283 466 aaKnown RBP eCLIP24.52■■□□□ 1.52
PDZRN3-202ENST00000308537 MVPQ14764 893 aaKnown RBP24.52■■□□□ 1.52
PDZRN3-202ENST00000308537 CEP85Q6P2H3 762 aa24.52■■□□□ 1.52
PDZRN3-202ENST00000308537 GAKO14976 1311 aa24.52■■□□□ 1.52
PDZRN3-202ENST00000308537 RFX7Q2KHR2 1363 aa24.52■■□□□ 1.52
PDZRN3-202ENST00000308537 LDHBP07195 334 aaKnown RBP24.51■■□□□ 1.51
PDZRN3-202ENST00000308537 ARID4AP29374 1257 aaPredicted RBP24.51■■□□□ 1.51
PDZRN3-202ENST00000308537 CDC42EP5Q6NZY7 148 aa24.51■■□□□ 1.51
PDZRN3-202ENST00000308537 PI16Q6UXB8 463 aa24.51■■□□□ 1.51
PDZRN3-202ENST00000308537 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.51■■□□□ 1.51
PDZRN3-202ENST00000308537 WNK4Q96J92 1243 aa24.51■■□□□ 1.51
PDZRN3-202ENST00000308537 GPR108Q9NPR9 543 aa24.51■■□□□ 1.51
PDZRN3-202ENST00000308537 HMG20BQ9P0W2 317 aa24.51■■□□□ 1.51
PDZRN3-202ENST00000308537 TNNI2P48788 182 aa24.5■■□□□ 1.51
PDZRN3-202ENST00000308537 NFIAQ12857 509 aa24.5■■□□□ 1.51
PDZRN3-202ENST00000308537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.5■■□□□ 1.51
PDZRN3-202ENST00000308537 ZBTB48P10074 688 aaPredicted RBP24.49■■□□□ 1.51
PDZRN3-202ENST00000308537 IREB2P48200 963 aaKnown RBP24.49■■□□□ 1.51
PDZRN3-202ENST00000308537 ANKRD13AQ8IZ07 590 aa24.49■■□□□ 1.51
PDZRN3-202ENST00000308537 SLC10A4Q96EP9 437 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms