RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 MAGEB6P1A0A0J9YX57 407 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 ADCY1Q08828 1119 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 TBC1D10BQ4KMP7 808 aaPredicted RBP14.23□□□□□ -0.13
USP38-201ENST00000307017 LMBR1LQ6UX01 489 aa14.23□□□□□ -0.13
USP38-201ENST00000307017 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.23□□□□□ -0.13
USP38-201ENST00000307017 E7EVH7 732 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 IFI16Q16666 785 aaKnown RBP14.22□□□□□ -0.13
USP38-201ENST00000307017 PNMA8AQ86V59 439 aaPredicted RBP14.22□□□□□ -0.13
USP38-201ENST00000307017 RASSF4Q9H2L5 321 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 PAG1Q9NWQ8 432 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 CEP120Q8N960 986 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 STMN2Q93045 179 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 TBC1D31Q96DN5 1066 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 FAM169AQ9Y6X4 670 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 SMARCA4P51532 1647 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 RDH13Q8NBN7 331 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 EEF2KMTQ96G04 330 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 CRNKL1Q9BZJ0 848 aaKnown RBP14.22□□□□□ -0.13
USP38-201ENST00000307017 TXNDC16Q9P2K2 825 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 NOL3O60936 208 aaKnown RBP14.22□□□□□ -0.13
USP38-201ENST00000307017 PEX19P40855 299 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 ATP1A2P50993 1020 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 ADKP55263 362 aaKnown RBP14.22□□□□□ -0.13
USP38-201ENST00000307017 RMND1Q9NWS8 449 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 GOLGA6L9A6NEM1 432 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 B4E1Z4 1266 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 SATB1Q01826 763 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 PHKBQ93100 1093 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 ERICH3Q5RHP9 1530 aa14.22□□□□□ -0.13
USP38-201ENST00000307017 RFC1P35251 1148 aaPredicted RBP14.21□□□□□ -0.13
USP38-201ENST00000307017 CTDSPL2Q05D32 466 aa14.21□□□□□ -0.13
USP38-201ENST00000307017 ZSCAN16Q9H4T2 348 aaPredicted RBP14.21□□□□□ -0.13
USP38-201ENST00000307017 CLEC11AQ9Y240 323 aa14.21□□□□□ -0.13
USP38-201ENST00000307017 NBPF6Q5VWK0 638 aa14.21□□□□□ -0.13
USP38-201ENST00000307017 NBPF5PQ86XG9 351 aaPredicted RBP14.21□□□□□ -0.13
USP38-201ENST00000307017 ZNF594Q96JF6 807 aaPredicted RBP14.21□□□□□ -0.13
USP38-201ENST00000307017 NBPF4Q96M43 638 aa14.21□□□□□ -0.13
USP38-201ENST00000307017 MCM9Q9NXL9 1143 aa14.21□□□□□ -0.13
USP38-201ENST00000307017 POLR2DO15514 142 aaKnown RBP14.21□□□□□ -0.13
USP38-201ENST00000307017 MAN1A1P33908 653 aa14.21□□□□□ -0.13
USP38-201ENST00000307017 KANK3Q6NY19 840 aa14.21□□□□□ -0.13
USP38-201ENST00000307017 BICC1Q9H694 974 aaKnown RBP14.21□□□□□ -0.13
USP38-201ENST00000307017 TPX2Q9ULW0 747 aaKnown RBP14.21□□□□□ -0.13
USP38-201ENST00000307017 OAS2P29728 719 aaKnown RBP14.21□□□□□ -0.13
USP38-201ENST00000307017 ATP6V1AP38606 617 aa14.21□□□□□ -0.13
USP38-201ENST00000307017 PIK3AP1Q6ZUJ8 805 aa14.21□□□□□ -0.13
USP38-201ENST00000307017 PSMA7O14818 248 aa14.21□□□□□ -0.14
USP38-201ENST00000307017 USH1GQ495M9 461 aa14.21□□□□□ -0.14
USP38-201ENST00000307017 FCHSD1Q86WN1 690 aa14.21□□□□□ -0.14
USP38-201ENST00000307017 A0A087WWV3 80 aa14.21□□□□□ -0.14
USP38-201ENST00000307017 ATP11AP98196 1134 aa14.21□□□□□ -0.14
USP38-201ENST00000307017 NOC4LQ9BVI4 516 aaKnown RBP14.21□□□□□ -0.14
USP38-201ENST00000307017 KRT86O43790 486 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 RPSAP08865 295 aaKnown RBP14.2□□□□□ -0.14
USP38-201ENST00000307017 HDXQ7Z353 690 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 NELFCDQ8IXH7 590 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 MORC4Q8TE76 937 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 RSRC1Q96IZ7 334 aaKnown RBP14.2□□□□□ -0.14
USP38-201ENST00000307017 SUPT6HQ7KZ85 1726 aaKnown RBP14.2□□□□□ -0.14
USP38-201ENST00000307017 KCNA4P22459 653 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 MTX1Q13505 466 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 DCLK2Q8N568 766 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 KCNG4Q8TDN1 519 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 CTAGE1Q96RT6 745 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 LLGL1Q15334 1064 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 NAA16Q6N069 864 aaPredicted RBP14.2□□□□□ -0.14
USP38-201ENST00000307017 GSDMBQ8TAX9 411 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 ANKRD24Q8TF21 1146 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 DDX27Q96GQ7 796 aaKnown RBP14.2□□□□□ -0.14
USP38-201ENST00000307017 HAUS7Q99871 368 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 CCDC169A6NNP5 214 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 DAPK1P53355 1430 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 HLA-DOAP06340 250 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 TAB2Q9NYJ8 693 aa14.2□□□□□ -0.14
USP38-201ENST00000307017 IGSF22Q8N9C0 903 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 EHBP1Q8NDI1 1231 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 FAM184BQ9ULE4 1060 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 GABPAQ06546 454 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 ANKRD13DQ6ZTN6 518 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 NGLY1Q96IV0 654 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 SREK1Q8WXA9 508 aaKnown RBP14.19□□□□□ -0.14
USP38-201ENST00000307017 RNF34Q969K3 372 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 AKR1B15C9JRZ8 316 aaPredicted RBP14.19□□□□□ -0.14
USP38-201ENST00000307017 PRDM1O75626 825 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 SEPT6Q14141 434 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 RUFY3Q7L099 469 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 DESI2Q9BSY9 194 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 OGFRQ9NZT2 677 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 TRAF5O00463 557 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 NDUFAB1O14561 156 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 SPOPO43791 374 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 CASC4Q6P4E1 433 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 BAG3O95817 575 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 PNOCQ13519 176 aa14.19□□□□□ -0.14
USP38-201ENST00000307017 GBP7Q8N8V2 638 aaPredicted RBP14.19□□□□□ -0.14
USP38-201ENST00000307017 ARMT1Q9H993 441 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 PTPRCP08575 1304 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 VPS41P49754 854 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 BIRC3Q13489 604 aa14.18□□□□□ -0.14
USP38-201ENST00000307017 STXBP4Q6ZWJ1 553 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms