RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 SPATA5Q8NB90 893 aa12.54□□□□□ -0.4
PCDHGC4-201ENST00000306593 HELBQ8NG08 1087 aaPredicted RBP12.54□□□□□ -0.4
PCDHGC4-201ENST00000306593 PDCL3Q9H2J4 239 aa12.54□□□□□ -0.4
PCDHGC4-201ENST00000306593 RIMS1Q86UR5 1692 aaKnown RBP12.54□□□□□ -0.4
PCDHGC4-201ENST00000306593 IL6STP40189 918 aaPredicted RBP12.54□□□□□ -0.4
PCDHGC4-201ENST00000306593 GNAQP50148 359 aa12.54□□□□□ -0.4
PCDHGC4-201ENST00000306593 UBE3CQ15386 1083 aa12.54□□□□□ -0.4
PCDHGC4-201ENST00000306593 RABL6Q3YEC7 729 aaPredicted RBP12.54□□□□□ -0.4
PCDHGC4-201ENST00000306593 CCDC186Q7Z3E2 898 aa12.54□□□□□ -0.4
PCDHGC4-201ENST00000306593 CCDC82Q8N4S0 544 aa12.54□□□□□ -0.4
PCDHGC4-201ENST00000306593 KAT14Q9H8E8 782 aa12.54□□□□□ -0.4
PCDHGC4-201ENST00000306593 SEC63Q9UGP8 760 aaKnown RBP12.54□□□□□ -0.4
PCDHGC4-201ENST00000306593 TSPY2A6NKD2 308 aa12.53□□□□□ -0.4
PCDHGC4-201ENST00000306593 TEX35Q5T0J7 233 aa12.53□□□□□ -0.4
PCDHGC4-201ENST00000306593 TPTE2Q6XPS3 522 aa12.53□□□□□ -0.4
PCDHGC4-201ENST00000306593 RBM28Q9NW13 759 aaKnown RBP12.53□□□□□ -0.4
PCDHGC4-201ENST00000306593 ZNHIT6Q9NWK9 470 aaKnown RBP12.53□□□□□ -0.4
PCDHGC4-201ENST00000306593 GOLGA6L9A6NEM1 432 aa12.53□□□□□ -0.4
PCDHGC4-201ENST00000306593 CYP21A2P08686 494 aa12.53□□□□□ -0.4
PCDHGC4-201ENST00000306593 SEC62Q99442 399 aaKnown RBP12.53□□□□□ -0.4
PCDHGC4-201ENST00000306593 AKAP12Q02952 1782 aa12.53□□□□□ -0.4
PCDHGC4-201ENST00000306593 ERVV-1B6SEH8 477 aa12.53□□□□□ -0.4
PCDHGC4-201ENST00000306593 CCDC194A0A1B0GVG4 234 aa12.52□□□□□ -0.4
PCDHGC4-201ENST00000306593 PPFIA3O75145 1194 aa12.52□□□□□ -0.4
PCDHGC4-201ENST00000306593 TSGA10IPQ3SY00 556 aa12.52□□□□□ -0.4
PCDHGC4-201ENST00000306593 ANO1Q5XXA6 986 aa12.52□□□□□ -0.4
PCDHGC4-201ENST00000306593 CCDC43Q96MW1 224 aaKnown RBP12.52□□□□□ -0.4
PCDHGC4-201ENST00000306593 DCCP43146 1447 aa12.52□□□□□ -0.4
PCDHGC4-201ENST00000306593 BIN1O00499 593 aa12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 RILPL1Q5EBL4 403 aa12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 NCOA5Q9HCD5 579 aaKnown RBP12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 ZNF532Q9HCE3 1301 aa12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 PLEKHG2Q9H7P9 1386 aa12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 ZNF500O60304 480 aaPredicted RBP12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 EPHA10Q5JZY3 1008 aa12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 FAM173BQ6P4H8 233 aa12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 TMC6Q7Z403 805 aa12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 AOPEPQ8N6M6 819 aa12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 ACBD3Q9H3P7 528 aa12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 TTC12Q9H892 705 aaPredicted RBP12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 SALL3Q9BXA9 1300 aa12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 PATL2C9JE40 543 aaKnown RBP12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 DEXIO95424 95 aa12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 RFC4P35249 363 aa12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 LUZP1Q86V48 1076 aa12.52□□□□□ -0.41
PCDHGC4-201ENST00000306593 TXLNBQ8N3L3 684 aa12.51□□□□□ -0.41
PCDHGC4-201ENST00000306593 SETD1BQ9UPS6 1966 aaKnown RBP12.51□□□□□ -0.41
PCDHGC4-201ENST00000306593 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.51□□□□□ -0.41
PCDHGC4-201ENST00000306593 LMTK3Q96Q04 1460 aa12.51□□□□□ -0.41
PCDHGC4-201ENST00000306593 ABCC12Q96J65 1359 aa12.51□□□□□ -0.41
PCDHGC4-201ENST00000306593 MAST3O60307 1309 aa12.51□□□□□ -0.41
PCDHGC4-201ENST00000306593 TRIM75PA6NK02 468 aa12.51□□□□□ -0.41
PCDHGC4-201ENST00000306593 B4E1Z4 1266 aa12.51□□□□□ -0.41
PCDHGC4-201ENST00000306593 PDE8BO95263 885 aa12.51□□□□□ -0.41
PCDHGC4-201ENST00000306593 TTC6Q86TZ1 520 aa12.51□□□□□ -0.41
PCDHGC4-201ENST00000306593 PIBF1Q8WXW3 757 aa12.51□□□□□ -0.41
PCDHGC4-201ENST00000306593 MARCKSP29966 332 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 CCDC148Q8NFR7 591 aa12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 ZNF830Q96NB3 372 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 CALML3P27482 149 aa12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 ADALQ6DHV7 355 aa12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 C16orf45Q96MC5 204 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 CBX8Q9HC52 389 aa12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 ZDHHC9Q9Y397 364 aa12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 PDIA3P30101 505 aaKnown RBP12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 SCRN1Q12765 414 aa12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 RMND1Q9NWS8 449 aa12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 FGAP02671 866 aa12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 RAB34Q9BZG1 259 aa12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 ASAP1Q9ULH1 1129 aa12.5□□□□□ -0.41
PCDHGC4-201ENST00000306593 CUTAO60888 179 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 SKILP12757 684 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 KRT2P35908 639 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 ZNF804AQ7Z570 1209 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 PUS3Q9BZE2 481 aaKnown RBP12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 BMP2KQ9NSY1 1161 aaPredicted RBP12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 RTCBQ9Y3I0 505 aaKnown RBP12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 NRXN3Q9Y4C0 1643 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 CDHR2Q9BYE9 1310 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 PDE6AP16499 860 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 TRIM28Q13263 835 aaKnown RBP12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 CERS3Q8IU89 383 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 ARMT1Q9H993 441 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 ZMYM6O95789 1325 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 UBASH3AP57075 661 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 ST5P78524 1137 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 MIGA1Q8NAN2 632 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 CTAGE1Q96RT6 745 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 MED23Q9ULK4 1368 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 LARGE1O95461 756 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 AKNAD1Q5T1N1 836 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 NLRP10Q86W26 655 aa12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 ERCC4Q92889 916 aaPredicted RBP12.49□□□□□ -0.41
PCDHGC4-201ENST00000306593 MYO1BO43795 1136 aa12.48□□□□□ -0.41
PCDHGC4-201ENST00000306593 ZNF75DP51815 510 aa12.48□□□□□ -0.41
PCDHGC4-201ENST00000306593 CEP135Q66GS9 1140 aa12.48□□□□□ -0.41
PCDHGC4-201ENST00000306593 NSUN7Q8NE18 718 aaKnown RBP12.48□□□□□ -0.41
PCDHGC4-201ENST00000306593 CGNQ9P2M7 1197 aaKnown RBP12.48□□□□□ -0.41
PCDHGC4-201ENST00000306593 IQSEC3Q9UPP2 1182 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms