RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 THUMPD2Q9BTF0 503 aaKnown RBP15.95■□□□□ 0.14
HIPK3-201ENST00000303296 VPS41P49754 854 aa15.95■□□□□ 0.14
HIPK3-201ENST00000303296 MGARPQ8TDB4 240 aa15.95■□□□□ 0.14
HIPK3-201ENST00000303296 OPHN1O60890 802 aa15.95■□□□□ 0.14
HIPK3-201ENST00000303296 PHEXP78562 749 aa15.95■□□□□ 0.14
HIPK3-201ENST00000303296 RTN1Q16799 776 aa15.95■□□□□ 0.14
HIPK3-201ENST00000303296 KIFAP3Q92845 792 aa15.95■□□□□ 0.14
HIPK3-201ENST00000303296 ATP2A3Q93084 1043 aa15.95■□□□□ 0.14
HIPK3-201ENST00000303296 GJA3Q9Y6H8 435 aa15.95■□□□□ 0.14
HIPK3-201ENST00000303296 KRT83P78385 493 aa15.95■□□□□ 0.14
HIPK3-201ENST00000303296 ITKQ08881 620 aa15.95■□□□□ 0.14
HIPK3-201ENST00000303296 UTP11Q9Y3A2 253 aaKnown RBP15.95■□□□□ 0.14
HIPK3-201ENST00000303296 TNNI2P48788 182 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 RILPL1Q5EBL4 403 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 ZBTB41Q5SVQ8 909 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 CSRNP2Q9H175 543 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 SLC4A4Q9Y6R1 1079 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 NBPF6Q5VWK0 638 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 NBPF5PQ86XG9 351 aaPredicted RBP15.94■□□□□ 0.14
HIPK3-201ENST00000303296 NBPF4Q96M43 638 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 HNRNPCL2B2RXH8 293 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 CHMP2AO43633 222 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 HNRNPCL1O60812 293 aaKnown RBP15.94■□□□□ 0.14
HIPK3-201ENST00000303296 SKILP12757 684 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 HCLS1P14317 486 aaPredicted RBP15.94■□□□□ 0.14
HIPK3-201ENST00000303296 TSHZ3Q63HK5 1081 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 NECAB1Q8N987 351 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 IFRD2Q12894 506 aaPredicted RBP15.94■□□□□ 0.14
HIPK3-201ENST00000303296 DDX21Q9NR30 783 aaKnown RBP eCLIP15.94■□□□□ 0.14
HIPK3-201ENST00000303296 I3L4J1 428 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 OATP04181 439 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 FBXW4P57775 412 aa15.94■□□□□ 0.14
HIPK3-201ENST00000303296 KLF18A0A0U1RQI7 1052 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 PPP2R5AQ15172 486 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 CCDC26Q8TAB7 109 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 KRT3P12035 628 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 SAT1P21673 171 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 CEP128Q6ZU80 1094 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 PALM3A6NDB9 673 aaPredicted RBP15.93■□□□□ 0.14
HIPK3-201ENST00000303296 RIMBP2O15034 1052 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 ZBTB43O43298 467 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 GSTA1P08263 222 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 GSTA2P09210 222 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 PHLDB2Q86SQ0 1253 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 ACBD5Q5T8D3 534 aaPredicted RBP15.93■□□□□ 0.14
HIPK3-201ENST00000303296 UTP14CQ5TAP6 766 aaKnown RBP15.93■□□□□ 0.14
HIPK3-201ENST00000303296 KRBA2Q6ZNG9 492 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 HAUS2Q9NVX0 235 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 TRIM68Q6AZZ1 485 aa15.93■□□□□ 0.14
HIPK3-201ENST00000303296 BAG2O95816 211 aa15.92■□□□□ 0.14
HIPK3-201ENST00000303296 LMOD1P29536 600 aaPredicted RBP15.92■□□□□ 0.14
HIPK3-201ENST00000303296 TACO1Q9BSH4 297 aaKnown RBP15.92■□□□□ 0.14
HIPK3-201ENST00000303296 JAG2Q9Y219 1238 aa15.92■□□□□ 0.14
HIPK3-201ENST00000303296 KRT19P08727 400 aa15.92■□□□□ 0.14
HIPK3-201ENST00000303296 HHATQ5VTY9 493 aa15.92■□□□□ 0.14
HIPK3-201ENST00000303296 UBE3BQ7Z3V4 1068 aa15.92■□□□□ 0.14
HIPK3-201ENST00000303296 BAG5Q9UL15 447 aa15.92■□□□□ 0.14
HIPK3-201ENST00000303296 MCM5P33992 734 aa15.92■□□□□ 0.14
HIPK3-201ENST00000303296 SLC9A5Q14940 896 aa15.92■□□□□ 0.14
HIPK3-201ENST00000303296 UIMC1Q96RL1 719 aa15.92■□□□□ 0.14
HIPK3-201ENST00000303296 ZNF692Q9BU19 519 aaPredicted RBP15.92■□□□□ 0.14
HIPK3-201ENST00000303296 VCX3AQ9NNX9 186 aa15.92■□□□□ 0.14
HIPK3-201ENST00000303296 MAP3K2Q9Y2U5 619 aa15.92■□□□□ 0.14
HIPK3-201ENST00000303296 TBC1D8O95759 1140 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 PDE6AP16499 860 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 SCYL1Q96KG9 808 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 GOLGA6CA6NDK9 693 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 GOLGA6BA6NDN3 693 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 NOP56O00567 594 aaKnown RBP15.91■□□□□ 0.14
HIPK3-201ENST00000303296 GOLGA6DP0CG33 693 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 TNNC1P63316 161 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 GOLGA6AQ9NYA3 693 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 USH1CQ9Y6N9 552 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 TSNAXIP1Q2TAA8 658 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 RRP36Q96EU6 259 aaKnown RBP15.91■□□□□ 0.14
HIPK3-201ENST00000303296 BLVRAP53004 296 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 RAB3GAP1Q15042 981 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 ZNF365Q70YC5 407 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 PPP1R42Q7Z4L9 355 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 VSIG1Q86XK7 387 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 BACH2Q9BYV9 841 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 RNF8O76064 485 aa15.91■□□□□ 0.14
HIPK3-201ENST00000303296 TRIM56Q9BRZ2 755 aaKnown RBP15.91■□□□□ 0.14
HIPK3-201ENST00000303296 DDX39AO00148 427 aaKnown RBP15.9■□□□□ 0.14
HIPK3-201ENST00000303296 GPIHBP1Q8IV16 184 aa15.9■□□□□ 0.14
HIPK3-201ENST00000303296 PLEKHH1Q9ULM0 1364 aa15.9■□□□□ 0.14
HIPK3-201ENST00000303296 ARHGAP42A6NI28 874 aa15.9■□□□□ 0.14
HIPK3-201ENST00000303296 EPB41P11171 864 aaKnown RBP15.9■□□□□ 0.14
HIPK3-201ENST00000303296 JADE1Q6IE81 842 aa15.9■□□□□ 0.14
HIPK3-201ENST00000303296 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.9■□□□□ 0.14
HIPK3-201ENST00000303296 EVI5LQ96CN4 794 aa15.9■□□□□ 0.14
HIPK3-201ENST00000303296 ACSBG1Q96GR2 724 aa15.9■□□□□ 0.14
HIPK3-201ENST00000303296 KRT79Q5XKE5 535 aa15.9■□□□□ 0.14
HIPK3-201ENST00000303296 RNF10Q8N5U6 811 aaKnown RBP15.9■□□□□ 0.14
HIPK3-201ENST00000303296 A0A1B0GUA9 196 aa15.9■□□□□ 0.14
HIPK3-201ENST00000303296 APOEP02649 317 aa15.9■□□□□ 0.14
HIPK3-201ENST00000303296 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.9■□□□□ 0.14
HIPK3-201ENST00000303296 NUB1Q9Y5A7 615 aa15.9■□□□□ 0.14
HIPK3-201ENST00000303296 UBE2HP62256 183 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms