RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 DNM1Q05193 864 aaKnown RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 TRPC3Q13507 836 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 HSP90AA5PQ58FG0 334 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 LRRC59Q96AG4 307 aaKnown RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 POLE3Q9NRF9 147 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 CTNND2Q9UQB3 1225 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 LMOD1P29536 600 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 ZNF569Q5MCW4 686 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 AKNAD1Q5T1N1 836 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 SLC4A4Q9Y6R1 1079 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 TLDC2A0PJX2 215 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 C6orf229H3BNL8 230 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 NAPAP54920 295 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 Q6ZUG5 572 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 ATP5J2-PTCD1G3V325 749 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 GIGYF1O75420 1035 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 BMP15O95972 392 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 HDXQ7Z353 690 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 MRRFQ96E11 262 aaKnown RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 TYRO3Q06418 890 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 PPANQ9NQ55 473 aaKnown RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 DACT1Q9NYF0 836 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 ZBTB21Q9ULJ3 1066 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 RTN1Q16799 776 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 NBPF7P0C2Y1 421 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 PLS1Q14651 629 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 PPP1R42Q7Z4L9 355 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 PDCD7Q8N8D1 485 aaKnown RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 AFAP1L1Q8TED9 768 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 DHX58Q96C10 678 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 DBF4Q9UBU7 674 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 RTL9Q8NET4 1388 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 PSMA7O14818 248 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 CASQ2O14958 399 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 ST5P78524 1137 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 BICDL2A1A5D9 508 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 RNF8O76064 485 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 ZNF853P0CG23 659 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 ERCC5P28715 1186 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 BRF1Q92994 677 aa6.25□□□□□ -1.41
CPSF2-201ENST00000298875 MTRF1LQ9UGC7 380 aaKnown RBP6.25□□□□□ -1.41
CPSF2-201ENST00000298875 GMNNO75496 209 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 TNNC1P63316 161 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 SEL1L2Q5TEA6 688 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 GKAP1Q5VSY0 366 aaPredicted RBP6.24□□□□□ -1.41
CPSF2-201ENST00000298875 CNNM2Q9H8M5 875 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 AGTPBP1Q9UPW5 1226 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 RMDN2Q96LZ7 410 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 DUOX2Q9NRD8 1548 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 KDM6BO15054 1643 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 XRCC6P12956 609 aaKnown RBP eCLIP6.24□□□□□ -1.41
CPSF2-201ENST00000298875 STX17P56962 302 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 LDHAL6AQ6ZMR3 332 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 WAPLQ7Z5K2 1190 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 IFNKQ9P0W0 207 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 LARSQ9P2J5 1176 aaKnown RBP6.24□□□□□ -1.41
CPSF2-201ENST00000298875 EIF2AK4Q9P2K8 1649 aaKnown RBP6.24□□□□□ -1.41
CPSF2-201ENST00000298875 SPAG1Q07617 926 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 KIAA1524Q8TCG1 905 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 JAKMIP2Q96AA8 810 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 FEZ2Q9UHY8 353 aaPredicted RBP6.24□□□□□ -1.41
CPSF2-201ENST00000298875 CDC5LQ99459 802 aaKnown RBP6.24□□□□□ -1.41
CPSF2-201ENST00000298875 NKIRAS1Q9NYS0 192 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 FAM169AQ9Y6X4 670 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 ASXL1Q8IXJ9 1541 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 SPTLC2O15270 562 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 PRIM1P49642 420 aaKnown RBP6.24□□□□□ -1.41
CPSF2-201ENST00000298875 GEN1Q17RS7 908 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 VPS52Q8N1B4 723 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 SPDYE3A6NKU9 549 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 VIMP08670 466 aaKnown RBP6.24□□□□□ -1.41
CPSF2-201ENST00000298875 KRT5P13647 590 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 CCT6AP40227 531 aaKnown RBP6.24□□□□□ -1.41
CPSF2-201ENST00000298875 RAPGEF1Q13905 1077 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 SYT10Q6XYQ8 523 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 MAPKBP1O60336 1514 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 HOXA7P31268 230 aaPredicted RBP6.24□□□□□ -1.41
CPSF2-201ENST00000298875 NMIQ13287 307 aaPredicted RBP6.24□□□□□ -1.41
CPSF2-201ENST00000298875 PTPRKQ15262 1439 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 UQCRFS1P1P0C7P4 283 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 VAV2P52735 878 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 SATB1Q01826 763 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 NME9Q86XW9 330 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 CHPF2Q9P2E5 772 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 ZKSCAN5Q9Y2L8 839 aa6.24□□□□□ -1.41
CPSF2-201ENST00000298875 CEP104O60308 925 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 PPFIA2O75334 1257 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 CCDC42Q96M95 316 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 A2MP01023 1474 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 PPP2R3AQ06190 1150 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 GPR161Q8N6U8 529 aaKnown RBP6.23□□□□□ -1.41
CPSF2-201ENST00000298875 SMARCC2Q8TAQ2 1214 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 BCAP29Q9UHQ4 241 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 DCAF17Q5H9S7 520 aaPredicted RBP6.23□□□□□ -1.41
CPSF2-201ENST00000298875 TCEANC2Q96MN5 208 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 TTC21BQ7Z4L5 1316 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms