RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 AIFM3Q96NN9 605 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 CCDC192P0DO97 292 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 PDIA4P13667 645 aaKnown RBP10.9□□□□□ -0.66
PRDM9-201ENST00000296682 CYP7A1P22680 504 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 ZSCAN30Q86W11 494 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 APPBP2Q92624 585 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 SRP68Q9UHB9 627 aaKnown RBP10.9□□□□□ -0.66
PRDM9-201ENST00000296682 SLC4A4Q9Y6R1 1079 aa10.9□□□□□ -0.66
PRDM9-201ENST00000296682 GNPATO15228 680 aa10.89□□□□□ -0.67
PRDM9-201ENST00000296682 CREBRFQ8IUR6 639 aa10.89□□□□□ -0.67
PRDM9-201ENST00000296682 FBXL16Q8N461 479 aa10.89□□□□□ -0.67
PRDM9-201ENST00000296682 RANBP6O60518 1105 aaKnown RBP10.89□□□□□ -0.67
PRDM9-201ENST00000296682 ZPR1O75312 459 aa10.89□□□□□ -0.67
PRDM9-201ENST00000296682 HMGB1P09429 215 aaKnown RBP10.89□□□□□ -0.67
PRDM9-201ENST00000296682 CCDC152Q4G0S7 254 aa10.89□□□□□ -0.67
PRDM9-201ENST00000296682 TMEM67Q5HYA8 995 aa10.89□□□□□ -0.67
PRDM9-201ENST00000296682 CPLX2Q6PUV4 134 aaKnown RBP10.89□□□□□ -0.67
PRDM9-201ENST00000296682 RGS22Q8NE09 1264 aa10.89□□□□□ -0.67
PRDM9-201ENST00000296682 SDR42E1Q8WUS8 393 aa10.89□□□□□ -0.67
PRDM9-201ENST00000296682 SCAND2PQ9GZW5 306 aaPredicted RBP10.89□□□□□ -0.67
PRDM9-201ENST00000296682 COL24A1Q17RW2 1714 aa10.89□□□□□ -0.67
PRDM9-201ENST00000296682 GOLGA6L19H0YKK7 550 aa10.89□□□□□ -0.67
PRDM9-201ENST00000296682 TRIM29Q14134 588 aa10.89□□□□□ -0.67
PRDM9-201ENST00000296682 NBPF5PQ86XG9 351 aaPredicted RBP10.89□□□□□ -0.67
PRDM9-201ENST00000296682 PDLIM2Q96JY6 352 aa10.89□□□□□ -0.67
PRDM9-201ENST00000296682 DLEC1Q9Y238 1755 aa10.89□□□□□ -0.67
PRDM9-201ENST00000296682 KINO60870 393 aaKnown RBP10.88□□□□□ -0.67
PRDM9-201ENST00000296682 NR1I2O75469 434 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 RBM10P98175 930 aaKnown RBP10.88□□□□□ -0.67
PRDM9-201ENST00000296682 ITPK1Q13572 414 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 ZSCAN25Q6NSZ9 544 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 CCAR1Q8IX12 1150 aaKnown RBP10.88□□□□□ -0.67
PRDM9-201ENST00000296682 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.88□□□□□ -0.67
PRDM9-201ENST00000296682 LEO1Q8WVC0 666 aaPredicted RBP10.88□□□□□ -0.67
PRDM9-201ENST00000296682 DNAJC25Q9H1X3 360 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 ABCC12Q96J65 1359 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 A0A1B0GVL5 298 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 ERICH2A1L162 156 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 CCDC69A6NI79 296 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 PDE6AP16499 860 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 PDIA3P30101 505 aaKnown RBP10.88□□□□□ -0.67
PRDM9-201ENST00000296682 SPATA5Q8NB90 893 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 CFAP45Q9UL16 551 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 LTBP4Q8N2S1 1624 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 ANO6Q4KMQ2 910 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 FSIP1Q8NA03 581 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 SLC26A6Q9BXS9 759 aa10.88□□□□□ -0.67
PRDM9-201ENST00000296682 UBN2Q6ZU65 1347 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 METAP2P50579 478 aaKnown RBP eCLIP10.87□□□□□ -0.67
PRDM9-201ENST00000296682 TRIM28Q13263 835 aaKnown RBP10.87□□□□□ -0.67
PRDM9-201ENST00000296682 PUM3Q15397 648 aaKnown RBP10.87□□□□□ -0.67
PRDM9-201ENST00000296682 ERFEQ4G0M1 354 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 ANKRD18AQ8IVF6 992 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 USP28Q96RU2 1077 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 ANKIB1Q9P2G1 1089 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 RIPOR2Q9Y4F9 1068 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 CHD4Q14839 1912 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 TOM1O60784 492 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 HSP90AA4PQ58FG1 418 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 SLIT2O94813 1529 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 CYP2D7A0A087X1C5 515 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 RAD21O60216 631 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 ZFYP08048 801 aaPredicted RBP10.87□□□□□ -0.67
PRDM9-201ENST00000296682 IL6STP40189 918 aaPredicted RBP10.87□□□□□ -0.67
PRDM9-201ENST00000296682 RASGRF1Q13972 1273 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 DSCC1Q9BVC3 393 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 PLA2G12BQ9BX93 195 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 ZNF652Q9Y2D9 606 aa10.87□□□□□ -0.67
PRDM9-201ENST00000296682 GOLGA8AA7E2F4 631 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 DHX16O60231 1041 aaKnown RBP10.86□□□□□ -0.67
PRDM9-201ENST00000296682 AKAP17AQ02040 695 aaKnown RBP10.86□□□□□ -0.67
PRDM9-201ENST00000296682 CHRNDQ07001 517 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 HS1BP3Q53T59 392 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 SPECC1Q5M775 1068 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 FILIP1Q7Z7B0 1213 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 NSUN7Q8NE18 718 aaKnown RBP10.86□□□□□ -0.67
PRDM9-201ENST00000296682 LPIN2Q92539 896 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 SETDB2Q96T68 719 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 NACAP1Q9BZK3 213 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 SENP2Q9HC62 589 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 FBXO3Q9UK99 471 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 SLC12A7Q9Y666 1083 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 SCN7AQ01118 1682 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 CIAO1O76071 339 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 MFSD6Q6ZSS7 791 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 VSIG10Q8N0Z9 540 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 ATRNO75882 1429 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 UBE2Q2LH0YL09 131 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 CAVIN4Q5BKX8 364 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 GPR101Q96P66 508 aaPredicted RBP10.86□□□□□ -0.67
PRDM9-201ENST00000296682 UBAC1Q9BSL1 405 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 ALG1Q9BT22 464 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 FAM13BQ9NYF5 915 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 CCDC39Q9UFE4 941 aa10.86□□□□□ -0.67
PRDM9-201ENST00000296682 GOLGB1Q14789 3259 aaKnown RBP10.86□□□□□ -0.67
PRDM9-201ENST00000296682 ZBTB22O15209 634 aa10.85□□□□□ -0.67
PRDM9-201ENST00000296682 ZNF165P49910 485 aa10.85□□□□□ -0.67
PRDM9-201ENST00000296682 HMGN5P82970 282 aaKnown RBP10.85□□□□□ -0.67
PRDM9-201ENST00000296682 TTF1Q15361 905 aaPredicted RBP10.85□□□□□ -0.67
PRDM9-201ENST00000296682 PDILTQ8N807 584 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms