RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 GRIN2AQ12879 1464 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 ZSCAN26Q16670 478 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 AKAP4Q5JQC9 854 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 FERMT1Q9BQL6 677 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 STX8Q9UNK0 236 aa12.43□□□□□ -0.42
PBRM1-201ENST00000296302 CUTAO60888 179 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 PPFIA1Q13136 1202 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 MTHFSDQ2M296 383 aaKnown RBP12.42□□□□□ -0.42
PBRM1-201ENST00000296302 PHACTR3Q96KR7 559 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 KDM5BQ9UGL1 1544 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 ARID5AQ03989 594 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 KRT79Q5XKE5 535 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 PPFIBP2Q8ND30 876 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 TSNARE1Q96NA8 513 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 TM6SF1Q9BZW5 370 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 GOLGA6BA6NDN3 693 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 HEATR3Q7Z4Q2 680 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 IFT20Q8IY31 132 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 C6orf50Q9HD87 102 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 CD109Q6YHK3 1445 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 GIGYF1O75420 1035 aaPredicted RBP12.42□□□□□ -0.42
PBRM1-201ENST00000296302 DTHD1Q6ZMT9 781 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 UBLCP1Q8WVY7 318 aaPredicted RBP12.42□□□□□ -0.42
PBRM1-201ENST00000296302 KIF24Q5T7B8 1368 aa12.42□□□□□ -0.42
PBRM1-201ENST00000296302 HMGB2P26583 209 aaKnown RBP12.41□□□□□ -0.42
PBRM1-201ENST00000296302 CALCOCO2Q13137 446 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 FAM173BQ6P4H8 233 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 TRIM7Q9C029 511 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 FERP16591 822 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 ATP5DP30049 168 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 CCT6AP40227 531 aaKnown RBP12.41□□□□□ -0.42
PBRM1-201ENST00000296302 GSTO1P78417 241 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 LRRC45Q96CN5 670 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 ZPR1O75312 459 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 ZNF202O95125 648 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 TBC1D8BQ0IIM8 1120 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 RUFY4Q6ZNE9 571 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 CROCCP2Q86T23 111 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 DAAM2Q86T65 1068 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 PLCD3Q8N3E9 789 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 RPGRIP1Q96KN7 1286 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 NAP1L3Q99457 506 aaPredicted RBP12.41□□□□□ -0.42
PBRM1-201ENST00000296302 NUP58Q9BVL2 599 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 MTUS1Q9ULD2 1270 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 PPIP5K1Q6PFW1 1433 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 SSH2Q76I76 1423 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 TSPY3P0CV98 308 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 TSPY8P0CW00 308 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 ALDH3A1P30838 453 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 NAPAP54920 295 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
PBRM1-201ENST00000296302 TRAF1Q13077 416 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 UTP14CQ5TAP6 766 aaKnown RBP12.4□□□□□ -0.42
PBRM1-201ENST00000296302 GAS2L3Q86XJ1 694 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 JAKMIP2Q96AA8 810 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 ITSN2Q9NZM3 1697 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 VWA3BQ502W6 1294 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 ATP11AP98196 1134 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 TFCP2Q12800 502 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 FBXO31Q5XUX0 539 aaPredicted RBP12.4□□□□□ -0.42
PBRM1-201ENST00000296302 INTS8Q75QN2 995 aaKnown RBP12.4□□□□□ -0.42
PBRM1-201ENST00000296302 KIAA1524Q8TCG1 905 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 ZBTB9Q96C00 473 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 NKIRAS1Q9NYS0 192 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 CPSF2Q9P2I0 782 aaKnown RBP12.4□□□□□ -0.42
PBRM1-201ENST00000296302 SYNRGQ9UMZ2 1314 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 HPDP32754 393 aaPredicted RBP12.4□□□□□ -0.42
PBRM1-201ENST00000296302 DMTNQ08495 405 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 CCDC152Q4G0S7 254 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 TSC1Q92574 1164 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 KCNK9Q9NPC2 374 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 RBM28Q9NW13 759 aaKnown RBP12.4□□□□□ -0.42
PBRM1-201ENST00000296302 CTNND2Q9UQB3 1225 aa12.4□□□□□ -0.42
PBRM1-201ENST00000296302 FLT4P35916 1363 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 SMIM23A6NLE4 172 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 CDC37L1Q7L3B6 337 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 TMEM87BQ96K49 555 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 MCM7P33993 719 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 LMNTD2Q8IXW0 634 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 SECISBP2LQ93073 1101 aaKnown RBP12.39□□□□□ -0.43
PBRM1-201ENST00000296302 MRFAP1L1Q96HT8 127 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 NOC4LQ9BVI4 516 aaKnown RBP12.39□□□□□ -0.43
PBRM1-201ENST00000296302 VPS16Q9H269 839 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 NFE2L3Q9Y4A8 694 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 IBTKQ9P2D0 1353 aaPredicted RBP12.39□□□□□ -0.43
PBRM1-201ENST00000296302 EFCAB8A8MWE9 144 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 VIMP08670 466 aaKnown RBP12.39□□□□□ -0.43
PBRM1-201ENST00000296302 PLCD1P51178 756 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 CLNS1AP54105 237 aaKnown RBP12.39□□□□□ -0.43
PBRM1-201ENST00000296302 BABAM1Q9NWV8 329 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 ZNF215Q9UL58 517 aaPredicted RBP12.39□□□□□ -0.43
PBRM1-201ENST00000296302 MAP3K5Q99683 1374 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 CCDC160A6NGH7 325 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 FOXO3O43524 673 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 CABP5Q9NP86 173 aa12.39□□□□□ -0.43
PBRM1-201ENST00000296302 HLA-DOAP06340 250 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 PAK2Q13177 524 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 GSTA5Q7RTV2 222 aa12.38□□□□□ -0.43
PBRM1-201ENST00000296302 CCDC51Q96ER9 411 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms